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KJC3_007120-T1, KJC3_007120-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007120-T1
Unique NameKJC3_007120-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:1503876..1505536-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007120-T1 ID=KJC3_007120-T1|Name=KJC3_007120-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1661bp|location=Sequence derived from alignment at ch5:1503876..1505536- (Aspergillus niger KJC3)
GTCCATTCTCTCCAAGTGCTAAGTTACCCAAGTAATGAACAAACACCTAT
CCACAGTAATATCCCATTTAAAGACCAAACCATGTCCATCTACTTCACCA
CTATTGCTCTTATATACTATCAACCTCGGAAACATCTAGTATTAATAATG
AGCAAAACCCCCCCTTCCCCCACGCCAGCATATCCCCACTACCAACCCTG
TAATATTCGCCCGTCCCATACAATACAATACCCACCGCCCAGGCACGTCA
CAAACAGCTAGCCTGATTGACACGCGTAGCTTAGCTAGCTTTCATCTCTT
CATCTTTATCTTCGAACCTCCCTCCCCTTTCCTTAACTAATAACAAAAGA
AGATATCCCACCTCATCCAAGATGTCCCTAATCACACCACCCCCCATCAC
CATCGTACGTTACTCTCCTCCTTCCCCACATCCATTCCAAGAAAAAATAA
GAAAACAAAAATCTAACCCGCACAGGAAGACCTCCATGCTTTCCAAGCAA
AACACTTCCCGGGAAGCATCATCGCCCACCAGACACCACAACCGCAAGCA
GTGACCAACACCAACCTCCCCGAAGAATACACCTCACATGACTACGAAGA
ACAATACGACTGGAATGAAGAATATGAAGAAGAAGATGAAGATCTAGGCT
ACTACCCCGACGGCGTGAAACGCACACTCACGGACGAACAAATCCGCATT
TTCAGACATAGTGAGATCCATGCCTTGAGGAGGGAGAAGGAGTTGCGTGA
GGAGGAGGAGGCGGATGCTGCTGCTTCCGCTGCTGCTGCTGAAGCTGAAG
CGGCTGCAGAGCATGCGGTAGATGCAGGTGCGGATGTAGGCGCAGATGCG
AACGCAAAGACAGATGCTGCTGGTACGGAACAAGCGAGCAAGTCTCGGGT
AGAAGGGGAAGATACAGATGTGAAGATGGATTATGGGGATGGGGGTGTTT
CAAATACAACTTCGACTTCGAACCAGACTTCTAGGCCTGTGCCGCAGTTT
ACAGGCAGGAGGATCATTTCGTATGATGATTGAGATTCGGATTGAGGGAG
AGGATGGGGCATTACGGCGGTTTTATGTGACTGCCTCCTATCAACCTATC
TATCTGCATGTCTGCCTACCTGGCTATCTGTGATGTGATGCGATTAGCCA
CTCTGGTTTCTTACGCCCCCGCAGGAATCACCGTCGACATTGTGTTCGAG
GTTCAAAGTGCTTTGCATGCACACCGACCTAACCTTTCTGACATGGTGAG
TTTCTCACAACATTCATTTATTTTTGTTATTCTACCCCCCACCATGATGA
AAACATCGTATCAGTCATCCTTAGTCGGAGCGCCATACCATCTGCGGATG
TGTAAGGCTATGTCGACTTAAATCTTCTCTCTGAAGTTACTTGTTATTGC
TGCTTGTTGGACTTGAACTTTCTCTATGTTCTGTTGCTAATCCACTTATT
GACTAGTGCTGTCTTGGACCAGGCAAGAGCAACTGAAATGCAGCTTTGAA
CATCCTATGTATTGCCGTTGCAAATACCCAGTAAACGGGTGTGCGACACA
TCGGTTATGTCGTGATCCGGGCATACGTCTAGTAAAAGGCTTGAGCGATA
AAAGCCAGCCTCTCGACTTCGCTGAGAGCATGACCTTCATGGAAGCAGCA
TGTCTTCATTC
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Coding sequence (CDS) from alignment at ch5:1503876..1505536-

>KJC3_007120-T1 ID=KJC3_007120-T1|Name=KJC3_007120-T1|organism=Aspergillus niger KJC3|type=CDS|length=1182bp|location=Sequence derived from alignment at ch5:1503876..1505536- (Aspergillus niger KJC3)
GAAGACCTCCATGCTTTCCAAGCAAAACACTTCCCGGGAAGCATCATCGC
CCACCAGACACCACAACCGCAAGCAGTGACCAACACCAACCTCCCCGAAG
AATACACCTCACATGACTACGAAGAACAATACGACTGGAATGAAGAATAT
GAAGAAGAAGATGAAGATCTAGGCTACTACCCCGACGGCGTGAAACGCAC
ACTCACGGACGAACAAATCCGCATTTTCAGACATAGTGAGATCCATGCCT
TGAGGAGGGAGAAGGAGTTGCGTGAGGAGGAGGAGGCGGATGCTGCTGCT
TCCGCTGCTGCTGCTGAAGCTGAAGCGGCTGCAGAGCATGCGGTAGATGC
AGGTGCGGATGTAGGCGCAGATGCGAACGCAAAGACAGATGCTGCTGGTA
CGGAACAAGCGAGCAAGTCTCGGGTAGAAGGGGAAGATACAGATGTGAAG
ATGGATTATGGGGATGGGGGTGTTTCAAATACAACTTCGACTTCGAACCA
GACTTCTAGGCCTGTGCCGCAGTTTACAGGCAGGAGGATCATTTCGTATG
ATGATTGAATGTCCCTAATCACACCACCCCCCATCACCATCGAAGACCTC
CATGCTTTCCAAGCAAAACACTTCCCGGGAAGCATCATCGCCCACCAGAC
ACCACAACCGCAAGCAGTGACCAACACCAACCTCCCCGAAGAATACACCT
CACATGACTACGAAGAACAATACGACTGGAATGAAGAATATGAAGAAGAA
GATGAAGATCTAGGCTACTACCCCGACGGCGTGAAACGCACACTCACGGA
CGAACAAATCCGCATTTTCAGACATAGTGAGATCCATGCCTTGAGGAGGG
AGAAGGAGTTGCGTGAGGAGGAGGAGGCGGATGCTGCTGCTTCCGCTGCT
GCTGCTGAAGCTGAAGCGGCTGCAGAGCATGCGGTAGATGCAGGTGCGGA
TGTAGGCGCAGATGCGAACGCAAAGACAGATGCTGCTGGTACGGAACAAG
CGAGCAAGTCTCGGGTAGAAGGGGAAGATACAGATGTGAAGATGGATTAT
GGGGATGGGGGTGTTTCAAATACAACTTCGACTTCGAACCAGACTTCTAG
GCCTGTGCCGCAGTTTACAGGCAGGAGGATCATTTCGTATGATGATTGAA
TGTCCCTAATCACACCACCCCCCATCACCATC
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007120KJC3_007120Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007120-T1KJC3_007120-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007120-T1.cdsKJC3_007120-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007120-T1.utr3p3KJC3_007120-T1.utr3p3Aspergillus niger KJC3three_prime_UTR
KJC3_007120-T1.utr3p2KJC3_007120-T1.utr3p2Aspergillus niger KJC3three_prime_UTR
KJC3_007120-T1.utr3p1KJC3_007120-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007120-T1.exon4KJC3_007120-T1.exon4Aspergillus niger KJC3exon
KJC3_007120-T1.exon3KJC3_007120-T1.exon3Aspergillus niger KJC3exon
KJC3_007120-T1.exon2KJC3_007120-T1.exon2Aspergillus niger KJC3exon
KJC3_007120-T1.exon1KJC3_007120-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007120-T1.utr5p1KJC3_007120-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR024526
DBxrefPFAM:PF12720
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:1503876..1505536 -
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