|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:1556419..1558967- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007136-T1 ID=KJC3_007136-T1|Name=KJC3_007136-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2549bp|location=Sequence derived from alignment at ch5:1556419..1558967- (Aspergillus niger KJC3)
TATAATAATAACAATAACAACAACTTCAGCCAACCCACCCCCTCTGTGGT
GATTGATTTTCTCCCTCTGTTTGGATTCGATTTCTGCCTGCATTCCTCTT
CTCTCAAGACTCCCATCCTCAGCCATTCATTTTATCCTTCATTCATTCAT
TGTATTTGGTCTAGTCTTAGTCCAGGTTTACTCTGTGCTCGAAAGTTAAT
CGAGCTCTGAAACTCCCCCCAAACCGTGGTTCGCGCCAATCTGCGACGGG
CGGTTTCCCCTTCTACTCGCATCTTTCTCTCACTTTCCCTCGGCCTGTCA
TCAAACGACCACATCCCTACTGCTAAACCATTGCCCGTGTTTTGTCCCTC
CTTTGCCCCAACCCAACCCCCCTCACATTCGTTTCTGACATATTAATCCA
CCCAAATCCACCATGTCTTTGAAAGACGTGTATCAGCGCTTTTTGGCCAA
CCCCAACTCGGCGCCCCTGGCCTCCGATGCGTCCTTGATCTATATCACCA
CCACCACCAAGCTGGATGGCGCATCCGCGGTGGTCAGCCACCTCACCAAG
CAGCAGAGAGTCGTCAAAACCAGGTCGGAGAATGTTCTGGATGTGATCGA
GAGCGCCAACTCCCTCTGCTTGGACATTGAGACTACCCTAGAGTTCGTGT
CTGGAGGCGGGGCCTATCTTCCCTCACTTGACGATAACTTCCTGGCTGAC
CACGTCGCAACTTTCCCCACGGTACGTCGGGCGCCTTGTGACCTCAGTCT
TCCTCCATCCGTCTCCTAACATTGCCTTCCCTTTCTTTGCGCAGATCCAT
ATCGTTCGCTTCAATTCGCAGAATCAGATCCAGAATGTCCGAATCTACTG
GGACCAAGCGTCGCTACTGAAACAAGTCGAAGTGATCGGTTCCCGTAGTC
GCAGCTGGCCGATTCGCGAACCCAAGGATCAGATTCGCCTGATCAAGTCC
GCTATTTCCTCCAATCCAGGCGACGACGGACCTGCAACCTCATTCCCCGC
AACAACCGAGAGCAGCGAGGAACGTAGCAAGAAGGGTTCCCCCGGAAAGA
GACATATCAAAGATCCCCACGCCGCTGAGTCACTCTTCGAGCTCCTCTCC
CCTGAAAAGGACCGAAGCGACCCAGTTCGCGCACCTCGTGCTCCTGCATC
TGCAAAGCCCCCGCCCCGCGATCCCAAGGAAATCTTCCATGAAGACGCTG
ATGTTCCCGACACACCGTCTCGGAGTAGGATCGCTCCCAAGGCTGGTGCT
AGCAAGAACTTCCAGCGCCAGCGTATCTTCGATGATGATGAGACGGTTGC
TGCGGAAGGTGGTCACGAGCAGATTGCCTATCGGGCTAACCCGAAGCGCT
TCGAACACTTCGAGCTCGGTGGGGACAACAGTGAGCGGGAGATCAAGGAA
AAGCCCAGCCGTCCTGTGTCGCGCCAGGCACCTCACTGGGACTTCGATGA
TTTCGTGACGCCCGAGAAGCCCAAGCGTCCGCTTCGTGGGGAACAAATCC
GTCACTTTGGCTGGAGCGATGATGAGCCGGACCTCACTTCGCCTCCGGCC
CATCCCCCGGTGCACCGTCCCCGTCGCGATGCCGAAACCCACTTCGTCCT
AACAGACGACCCCGAGGAGGACAAGAACGCCCCTCGTATCATCAGTTCCT
TCCAGAACAAGGGTCTGAGTCTCTATAAGAACCACCTATTCCAAGATGAG
GAGGAAGCCGCTGACGAGAACGCCCCTCTGTCTGTTGTCAACAACGGCCC
CAACCGCAAGAAGGACTACGAAACCCACTGGAATATCACCGCCGAGTCGC
CCCAGAACAGCAAGGTCAGCAGTGAGAACATGAAGCCTGTTCCGGGAGAT
CGCCAGAAGGCTCTAAAGAACATGCAGTCGTCCTGGGATGACCCTGAGCA
GTCGCCGGAGAAGGCGGCCCCTCCCCAGCGTCGCGCCATGCGTCATCTCA
ATCAGCGCAGCTGGGATATGGGAGAGAACTAAATGATGTATCCAATCATT
CAATGAGCTGAATGTCACACCCACCTGTCTATCAGATTTGACCATCGGGC
CTGCGCTCCTTACTCACTAAAATCCATACAGCGACGACAAGTCTTACACA
TCATGTTTCACTGAAGAGCGCACCCAAAAGCCTGCATATGATACTTTATT
CCCGCCGTGAACGATAGCAGAGTCAACGCATGCACGGATCTATGATAAAC
CACATGTTTCTGTTGAATTTTCGATTCCATTTTTCCATCCCCAGTTTCTA
GCTGTGTATTTTGTTTACCTACAGTTCAATATGATTGTCTTATTGCTTAC
TTGATGTTCCTTATTCGCTTCTTGTAAGAACTTTCCCACTGCTAATTATT
TTTTGTCCTTGGTTGCTTTGGTCCACCTATCGTTTACATTACGCATTGTC
TGTTAGAAACGAGTAGTCGGCACAATTGTATGCCCAGACGGATGAAATAC
CATATTCATGATAGGACATTTGATATCAGCATTATAGTTCCTTGTGAGGA
AACTCATACTTTTAGAAATATTGGGAAATCTAACATCATAATATGTGAC back to topCoding sequence (CDS) from alignment at ch5:1556419..1558967- >KJC3_007136-T1 ID=KJC3_007136-T1|Name=KJC3_007136-T1|organism=Aspergillus niger KJC3|type=CDS|length=2994bp|location=Sequence derived from alignment at ch5:1556419..1558967- (Aspergillus niger KJC3)
ATCCATATCGTTCGCTTCAATTCGCAGAATCAGATCCAGAATGTCCGAAT
CTACTGGGACCAAGCGTCGCTACTGAAACAAGTCGAAGTGATCGGTTCCC
GTAGTCGCAGCTGGCCGATTCGCGAACCCAAGGATCAGATTCGCCTGATC
AAGTCCGCTATTTCCTCCAATCCAGGCGACGACGGACCTGCAACCTCATT
CCCCGCAACAACCGAGAGCAGCGAGGAACGTAGCAAGAAGGGTTCCCCCG
GAAAGAGACATATCAAAGATCCCCACGCCGCTGAGTCACTCTTCGAGCTC
CTCTCCCCTGAAAAGGACCGAAGCGACCCAGTTCGCGCACCTCGTGCTCC
TGCATCTGCAAAGCCCCCGCCCCGCGATCCCAAGGAAATCTTCCATGAAG
ACGCTGATGTTCCCGACACACCGTCTCGGAGTAGGATCGCTCCCAAGGCT
GGTGCTAGCAAGAACTTCCAGCGCCAGCGTATCTTCGATGATGATGAGAC
GGTTGCTGCGGAAGGTGGTCACGAGCAGATTGCCTATCGGGCTAACCCGA
AGCGCTTCGAACACTTCGAGCTCGGTGGGGACAACAGTGAGCGGGAGATC
AAGGAAAAGCCCAGCCGTCCTGTGTCGCGCCAGGCACCTCACTGGGACTT
CGATGATTTCGTGACGCCCGAGAAGCCCAAGCGTCCGCTTCGTGGGGAAC
AAATCCGTCACTTTGGCTGGAGCGATGATGAGCCGGACCTCACTTCGCCT
CCGGCCCATCCCCCGGTGCACCGTCCCCGTCGCGATGCCGAAACCCACTT
CGTCCTAACAGACGACCCCGAGGAGGACAAGAACGCCCCTCGTATCATCA
GTTCCTTCCAGAACAAGGGTCTGAGTCTCTATAAGAACCACCTATTCCAA
GATGAGGAGGAAGCCGCTGACGAGAACGCCCCTCTGTCTGTTGTCAACAA
CGGCCCCAACCGCAAGAAGGACTACGAAACCCACTGGAATATCACCGCCG
AGTCGCCCCAGAACAGCAAGGTCAGCAGTGAGAACATGAAGCCTGTTCCG
GGAGATCGCCAGAAGGCTCTAAAGAACATGCAGTCGTCCTGGGATGACCC
TGAGCAGTCGCCGGAGAAGGCGGCCCCTCCCCAGCGTCGCGCCATGCGTC
ATCTCAATCAGCGCAGCTGGGATATGGGAGAGAACTAAATGTCTTTGAAA
GACGTGTATCAGCGCTTTTTGGCCAACCCCAACTCGGCGCCCCTGGCCTC
CGATGCGTCCTTGATCTATATCACCACCACCACCAAGCTGGATGGCGCAT
CCGCGGTGGTCAGCCACCTCACCAAGCAGCAGAGAGTCGTCAAAACCAGG
TCGGAGAATGTTCTGGATGTGATCGAGAGCGCCAACTCCCTCTGCTTGGA
CATTGAGACTACCCTAGAGTTCGTGTCTGGAGGCGGGGCCTATCTTCCCT
CACTTGACGATAACTTCCTGGCTGACCACGTCGCAACTTTCCCCACGATC
CATATCGTTCGCTTCAATTCGCAGAATCAGATCCAGAATGTCCGAATCTA
CTGGGACCAAGCGTCGCTACTGAAACAAGTCGAAGTGATCGGTTCCCGTA
GTCGCAGCTGGCCGATTCGCGAACCCAAGGATCAGATTCGCCTGATCAAG
TCCGCTATTTCCTCCAATCCAGGCGACGACGGACCTGCAACCTCATTCCC
CGCAACAACCGAGAGCAGCGAGGAACGTAGCAAGAAGGGTTCCCCCGGAA
AGAGACATATCAAAGATCCCCACGCCGCTGAGTCACTCTTCGAGCTCCTC
TCCCCTGAAAAGGACCGAAGCGACCCAGTTCGCGCACCTCGTGCTCCTGC
ATCTGCAAAGCCCCCGCCCCGCGATCCCAAGGAAATCTTCCATGAAGACG
CTGATGTTCCCGACACACCGTCTCGGAGTAGGATCGCTCCCAAGGCTGGT
GCTAGCAAGAACTTCCAGCGCCAGCGTATCTTCGATGATGATGAGACGGT
TGCTGCGGAAGGTGGTCACGAGCAGATTGCCTATCGGGCTAACCCGAAGC
GCTTCGAACACTTCGAGCTCGGTGGGGACAACAGTGAGCGGGAGATCAAG
GAAAAGCCCAGCCGTCCTGTGTCGCGCCAGGCACCTCACTGGGACTTCGA
TGATTTCGTGACGCCCGAGAAGCCCAAGCGTCCGCTTCGTGGGGAACAAA
TCCGTCACTTTGGCTGGAGCGATGATGAGCCGGACCTCACTTCGCCTCCG
GCCCATCCCCCGGTGCACCGTCCCCGTCGCGATGCCGAAACCCACTTCGT
CCTAACAGACGACCCCGAGGAGGACAAGAACGCCCCTCGTATCATCAGTT
CCTTCCAGAACAAGGGTCTGAGTCTCTATAAGAACCACCTATTCCAAGAT
GAGGAGGAAGCCGCTGACGAGAACGCCCCTCTGTCTGTTGTCAACAACGG
CCCCAACCGCAAGAAGGACTACGAAACCCACTGGAATATCACCGCCGAGT
CGCCCCAGAACAGCAAGGTCAGCAGTGAGAACATGAAGCCTGTTCCGGGA
GATCGCCAGAAGGCTCTAAAGAACATGCAGTCGTCCTGGGATGACCCTGA
GCAGTCGCCGGAGAAGGCGGCCCCTCCCCAGCGTCGCGCCATGCGTCATC
TCAATCAGCGCAGCTGGGATATGGGAGAGAACTAAATGTCTTTGAAAGAC
GTGTATCAGCGCTTTTTGGCCAACCCCAACTCGGCGCCCCTGGCCTCCGA
TGCGTCCTTGATCTATATCACCACCACCACCAAGCTGGATGGCGCATCCG
CGGTGGTCAGCCACCTCACCAAGCAGCAGAGAGTCGTCAAAACCAGGTCG
GAGAATGTTCTGGATGTGATCGAGAGCGCCAACTCCCTCTGCTTGGACAT
TGAGACTACCCTAGAGTTCGTGTCTGGAGGCGGGGCCTATCTTCCCTCAC
TTGACGATAACTTCCTGGCTGACCACGTCGCAACTTTCCCCACG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007136-T1.utr3p1 | KJC3_007136-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007136-T1.utr5p1 | KJC3_007136-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR032710 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:1556419..1558967 - |
|
