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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:2325059..2327255- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007390-T1 ID=KJC3_007390-T1|Name=KJC3_007390-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2197bp|location=Sequence derived from alignment at ch5:2325059..2327255- (Aspergillus niger KJC3)
ACTAATTCATCAACTCCGGCGCGTAAGTGTACCGTAGCGTCAGCCATGGA
GGTGTCTTGTCACAAGCGTCTGTCGTTTAACTGGCTGGTGCTTCTCGACT
GATTATGAATGCGTTTCTCCATTTCTACTACCACGGCACAGCCCCTTATC
TGGGCGGCTAAAGCTGTTTTCAATGCCTGCAAACGTGAGCACAAGCAAAA
CAAGTCAACGCTATCCTGCAACCGCTGGGCAAGGATGACACCAATTACGT
TTCGTCACTAGCGGCGCCAAATCAGTTCTGAAAGCCACTCGACTATTGTC
CACCCCAACTCGCTCCATGCTCCCGTACTTCGATTCAAAATTCTCTGCAG
ACCGATTATCGTGGGAGGGCGTAATGAGCTGCGGCTCCTTTGAATACGTA
CAGTCTGTCCTCCTTCACCAAAAATTGGGAGTAAAGTATTTCTCTGAATC
GACATGAACTACCTACTCTTCATAGGTGTGCTGAGATATGAAAGGCCCCA
CACTGTGTGATTCATGCAAATAGAATTGACTCTCCTGGCGCTCAGGTGGA
GCGCGATGTCTCGATAGTGACCCCCTCAATAGCAGATGCCATCAGGTTGG
AAGGAACAACTTGGCTCTATAAATGCAATCTAGCCGGCTTACCACCATGC
TCATCTCTTGGAGAATTGAGCTACAATTTCAATCTTGTATCGGAGACCGC
ATGATCTGAAATCTAAGATTCAGCCAATTTAAAATGCCATTTTTCAACCA
AGCTATGGTTAATCGGGTTTTGAGGCGACGGCGACAACCGAGTTCAGCCC
CGAATCCTACTCCTGAGCTCCAGCAGCGAAAGTCCTTCCCCAATGGAATC
AAAACCCTCTGTAGCCCGGATGATGGGACAATTGAGTACGTGCCTTATTC
GCTTAGTAAACCTCTCTAATGTTCTTCCAGCATCGTCTTCATTCATGGGT
TAACTGGTGACCGTGAAGCTACATGGACTGCCGAAGGTGCAACTGAACCC
TGGCCCAAAAGTCTCTTGCCATCCATACTCCCAACAGCTCGTATTCTCAC
ATTCGGCTACGATGCATTTGTGGTCGATTGGCGACGCCCAGTTTCAGAGA
ACTTCATCGGCAATCATGCCTGGAATCTGCTGACATCTCTTTCATCGTAC
CGAGATAACGACGACACGGTAAGATAACTGACTCTTGAATCTATCAGCGT
TTCGGGTTGTTGATACAAATAGAATGAACGACCTGTCATTTTTGTTTGCC
ATAGTCTGGGTGGACTAGTCTGCAAAGATGTACGATATCGCATCACGTTA
GTGGAAGACGCTGGCAAAAATGATACTAATGATGATAGGCCTTGTTTCAG
TCGAGGCAACGATCGGAGAAACATCTTCAAAGTATCCTCGATTGTACCCG
CGGTATTATCTTTCTTGGGACGCCGCACCACGGAGCTGGACTTGCGAACT
TGGCTGAAGTTGTCTCTCGATCCATCGGTCTTCTTAAGCAGACGAATCCA
AAAATCGTGGATGTTCTCAAGCGCGATTCCGAGGTACTTGCGCGGATCCA
GGAGGGCTTTCACACGATGATCAAGGCACACAGCACAGCAGAAACACCGC
CAATTGAGGTCACTTGCTTCTACGAGGAGCTTCCGGTGCTAGGCGTTGGC
TTAGTAAGCTAATAAAGAGGCCAGAGCTCCACTTTGATTGCTGACACCTA
AGCAATAGGTCGTGCCACAATATTCGGCCATCTTGCCCGGTTATATCACT
ATTGGCATACATAGGAACCATATGGATATGACAAAGTTTGTCAATTCCGA
AGATCCTGGATTTGTGGCTGTATGCGGAGAGCTACGTCGGTGGATTAGAG
ACACGGATCTAAACGAGAGATCTCACACCAAGAAATCACCAGCCGTCAAA
CCTCACGCTGCTTGTCAACATGGCAAAAATGGTCGACAATATAATCTTTT
CGCTAATGGCGCCCAAAGGATTGCAGATGGACACTACTTTGAGGCTGGAG
GAGATCAGAACTTTGGTATGATTCCACCTAAGGGTCAGTAATGAGTATGG
GGAATTCATCGGAGCAAATGGTATTTCATTTGGCGGCATCCCTAATACTT
GTATTTATGAGTAGAGTGTTTCCTGGTCAGCGTCTATATAAGGGAGAATC
GAGTAATGACACTTCAAAGTGGAGCAAATAATAACAATAAGTGAGCT back to topCoding sequence (CDS) from alignment at ch5:2325059..2327255- >KJC3_007390-T1 ID=KJC3_007390-T1|Name=KJC3_007390-T1|organism=Aspergillus niger KJC3|type=CDS|length=5475bp|location=Sequence derived from alignment at ch5:2325059..2327255- (Aspergillus niger KJC3)
GTCGTGCCACAATATTCGGCCATCTTGCCCGGTTATATCACTATTGGCAT
ACATAGGAACCATATGGATATGACAAAGTTTGTCAATTCCGAAGATCCTG
GATTTGTGGCTGTATGCGGAGAGCTACGTCGGTGGATTAGAGACACGGAT
CTAAACGAGAGATCTCACACCAAGAAATCACCAGCCGTCAAACCTCACGC
TGCTTGTCAACATGGCAAAAATGGTCGACAATATAATCTTTTCGCTAATG
GCGCCCAAAGGATTGCAGATGGACACTACTTTGAGGCTGGAGGAGATCAG
AACTTTGGTATGATTCCACCTAAGGGTCAGTAAGCCTTGTTTCAGTCGAG
GCAACGATCGGAGAAACATCTTCAAAGTATCCTCGATTGTACCCGCGGTA
TTATCTTTCTTGGGACGCCGCACCACGGAGCTGGACTTGCGAACTTGGCT
GAAGTTGTCTCTCGATCCATCGGTCTTCTTAAGCAGACGAATCCAAAAAT
CGTGGATGTTCTCAAGCGCGATTCCGAGGTACTTGCGCGGATCCAGGAGG
GCTTTCACACGATGATCAAGGCACACAGCACAGCAGAAACACCGCCAATT
GAGGTCACTTGCTTCTACGAGGAGCTTCCGGTGCTAGGCGTTGGCTTAAA
TGAACGACCTGTCATTTTTGTTTGCCATAGTCTGGGTGGACTAGTCTGCA
AAGATCATCGTCTTCATTCATGGGTTAACTGGTGACCGTGAAGCTACATG
GACTGCCGAAGGTGCAACTGAACCCTGGCCCAAAAGTCTCTTGCCATCCA
TACTCCCAACAGCTCGTATTCTCACATTCGGCTACGATGCATTTGTGGTC
GATTGGCGACGCCCAGTTTCAGAGAACTTCATCGGCAATCATGCCTGGAA
TCTGCTGACATCTCTTTCATCGTACCGAGATAACGACGACACGATGCCAT
TTTTCAACCAAGCTATGGTTAATCGGGTTTTGAGGCGACGGCGACAACCG
AGTTCAGCCCCGAATCCTACTCCTGAGCTCCAGCAGCGAAAGTCCTTCCC
CAATGGAATCAAAACCCTCTGTAGCCCGGATGATGGGACAATTGAGTCGT
GCCACAATATTCGGCCATCTTGCCCGGTTATATCACTATTGGCATACATA
GGAACCATATGGATATGACAAAGTTTGTCAATTCCGAAGATCCTGGATTT
GTGGCTGTATGCGGAGAGCTACGTCGGTGGATTAGAGACACGGATCTAAA
CGAGAGATCTCACACCAAGAAATCACCAGCCGTCAAACCTCACGCTGCTT
GTCAACATGGCAAAAATGGTCGACAATATAATCTTTTCGCTAATGGCGCC
CAAAGGATTGCAGATGGACACTACTTTGAGGCTGGAGGAGATCAGAACTT
TGGTATGATTCCACCTAAGGGTCAGTAAGCCTTGTTTCAGTCGAGGCAAC
GATCGGAGAAACATCTTCAAAGTATCCTCGATTGTACCCGCGGTATTATC
TTTCTTGGGACGCCGCACCACGGAGCTGGACTTGCGAACTTGGCTGAAGT
TGTCTCTCGATCCATCGGTCTTCTTAAGCAGACGAATCCAAAAATCGTGG
ATGTTCTCAAGCGCGATTCCGAGGTACTTGCGCGGATCCAGGAGGGCTTT
CACACGATGATCAAGGCACACAGCACAGCAGAAACACCGCCAATTGAGGT
CACTTGCTTCTACGAGGAGCTTCCGGTGCTAGGCGTTGGCTTAAATGAAC
GACCTGTCATTTTTGTTTGCCATAGTCTGGGTGGACTAGTCTGCAAAGAT
CATCGTCTTCATTCATGGGTTAACTGGTGACCGTGAAGCTACATGGACTG
CCGAAGGTGCAACTGAACCCTGGCCCAAAAGTCTCTTGCCATCCATACTC
CCAACAGCTCGTATTCTCACATTCGGCTACGATGCATTTGTGGTCGATTG
GCGACGCCCAGTTTCAGAGAACTTCATCGGCAATCATGCCTGGAATCTGC
TGACATCTCTTTCATCGTACCGAGATAACGACGACACGATGCCATTTTTC
AACCAAGCTATGGTTAATCGGGTTTTGAGGCGACGGCGACAACCGAGTTC
AGCCCCGAATCCTACTCCTGAGCTCCAGCAGCGAAAGTCCTTCCCCAATG
GAATCAAAACCCTCTGTAGCCCGGATGATGGGACAATTGAGTCGTGCCAC
AATATTCGGCCATCTTGCCCGGTTATATCACTATTGGCATACATAGGAAC
CATATGGATATGACAAAGTTTGTCAATTCCGAAGATCCTGGATTTGTGGC
TGTATGCGGAGAGCTACGTCGGTGGATTAGAGACACGGATCTAAACGAGA
GATCTCACACCAAGAAATCACCAGCCGTCAAACCTCACGCTGCTTGTCAA
CATGGCAAAAATGGTCGACAATATAATCTTTTCGCTAATGGCGCCCAAAG
GATTGCAGATGGACACTACTTTGAGGCTGGAGGAGATCAGAACTTTGGTA
TGATTCCACCTAAGGGTCAGTAAGCCTTGTTTCAGTCGAGGCAACGATCG
GAGAAACATCTTCAAAGTATCCTCGATTGTACCCGCGGTATTATCTTTCT
TGGGACGCCGCACCACGGAGCTGGACTTGCGAACTTGGCTGAAGTTGTCT
CTCGATCCATCGGTCTTCTTAAGCAGACGAATCCAAAAATCGTGGATGTT
CTCAAGCGCGATTCCGAGGTACTTGCGCGGATCCAGGAGGGCTTTCACAC
GATGATCAAGGCACACAGCACAGCAGAAACACCGCCAATTGAGGTCACTT
GCTTCTACGAGGAGCTTCCGGTGCTAGGCGTTGGCTTAAATGAACGACCT
GTCATTTTTGTTTGCCATAGTCTGGGTGGACTAGTCTGCAAAGATCATCG
TCTTCATTCATGGGTTAACTGGTGACCGTGAAGCTACATGGACTGCCGAA
GGTGCAACTGAACCCTGGCCCAAAAGTCTCTTGCCATCCATACTCCCAAC
AGCTCGTATTCTCACATTCGGCTACGATGCATTTGTGGTCGATTGGCGAC
GCCCAGTTTCAGAGAACTTCATCGGCAATCATGCCTGGAATCTGCTGACA
TCTCTTTCATCGTACCGAGATAACGACGACACGATGCCATTTTTCAACCA
AGCTATGGTTAATCGGGTTTTGAGGCGACGGCGACAACCGAGTTCAGCCC
CGAATCCTACTCCTGAGCTCCAGCAGCGAAAGTCCTTCCCCAATGGAATC
AAAACCCTCTGTAGCCCGGATGATGGGACAATTGAGTCGTGCCACAATAT
TCGGCCATCTTGCCCGGTTATATCACTATTGGCATACATAGGAACCATAT
GGATATGACAAAGTTTGTCAATTCCGAAGATCCTGGATTTGTGGCTGTAT
GCGGAGAGCTACGTCGGTGGATTAGAGACACGGATCTAAACGAGAGATCT
CACACCAAGAAATCACCAGCCGTCAAACCTCACGCTGCTTGTCAACATGG
CAAAAATGGTCGACAATATAATCTTTTCGCTAATGGCGCCCAAAGGATTG
CAGATGGACACTACTTTGAGGCTGGAGGAGATCAGAACTTTGGTATGATT
CCACCTAAGGGTCAGTAAGCCTTGTTTCAGTCGAGGCAACGATCGGAGAA
ACATCTTCAAAGTATCCTCGATTGTACCCGCGGTATTATCTTTCTTGGGA
CGCCGCACCACGGAGCTGGACTTGCGAACTTGGCTGAAGTTGTCTCTCGA
TCCATCGGTCTTCTTAAGCAGACGAATCCAAAAATCGTGGATGTTCTCAA
GCGCGATTCCGAGGTACTTGCGCGGATCCAGGAGGGCTTTCACACGATGA
TCAAGGCACACAGCACAGCAGAAACACCGCCAATTGAGGTCACTTGCTTC
TACGAGGAGCTTCCGGTGCTAGGCGTTGGCTTAAATGAACGACCTGTCAT
TTTTGTTTGCCATAGTCTGGGTGGACTAGTCTGCAAAGATCATCGTCTTC
ATTCATGGGTTAACTGGTGACCGTGAAGCTACATGGACTGCCGAAGGTGC
AACTGAACCCTGGCCCAAAAGTCTCTTGCCATCCATACTCCCAACAGCTC
GTATTCTCACATTCGGCTACGATGCATTTGTGGTCGATTGGCGACGCCCA
GTTTCAGAGAACTTCATCGGCAATCATGCCTGGAATCTGCTGACATCTCT
TTCATCGTACCGAGATAACGACGACACGATGCCATTTTTCAACCAAGCTA
TGGTTAATCGGGTTTTGAGGCGACGGCGACAACCGAGTTCAGCCCCGAAT
CCTACTCCTGAGCTCCAGCAGCGAAAGTCCTTCCCCAATGGAATCAAAAC
CCTCTGTAGCCCGGATGATGGGACAATTGAGTCGTGCCACAATATTCGGC
CATCTTGCCCGGTTATATCACTATTGGCATACATAGGAACCATATGGATA
TGACAAAGTTTGTCAATTCCGAAGATCCTGGATTTGTGGCTGTATGCGGA
GAGCTACGTCGGTGGATTAGAGACACGGATCTAAACGAGAGATCTCACAC
CAAGAAATCACCAGCCGTCAAACCTCACGCTGCTTGTCAACATGGCAAAA
ATGGTCGACAATATAATCTTTTCGCTAATGGCGCCCAAAGGATTGCAGAT
GGACACTACTTTGAGGCTGGAGGAGATCAGAACTTTGGTATGATTCCACC
TAAGGGTCAGTAAGCCTTGTTTCAGTCGAGGCAACGATCGGAGAAACATC
TTCAAAGTATCCTCGATTGTACCCGCGGTATTATCTTTCTTGGGACGCCG
CACCACGGAGCTGGACTTGCGAACTTGGCTGAAGTTGTCTCTCGATCCAT
CGGTCTTCTTAAGCAGACGAATCCAAAAATCGTGGATGTTCTCAAGCGCG
ATTCCGAGGTACTTGCGCGGATCCAGGAGGGCTTTCACACGATGATCAAG
GCACACAGCACAGCAGAAACACCGCCAATTGAGGTCACTTGCTTCTACGA
GGAGCTTCCGGTGCTAGGCGTTGGCTTAAATGAACGACCTGTCATTTTTG
TTTGCCATAGTCTGGGTGGACTAGTCTGCAAAGATCATCGTCTTCATTCA
TGGGTTAACTGGTGACCGTGAAGCTACATGGACTGCCGAAGGTGCAACTG
AACCCTGGCCCAAAAGTCTCTTGCCATCCATACTCCCAACAGCTCGTATT
CTCACATTCGGCTACGATGCATTTGTGGTCGATTGGCGACGCCCAGTTTC
AGAGAACTTCATCGGCAATCATGCCTGGAATCTGCTGACATCTCTTTCAT
CGTACCGAGATAACGACGACACGATGCCATTTTTCAACCAAGCTATGGTT
AATCGGGTTTTGAGGCGACGGCGACAACCGAGTTCAGCCCCGAATCCTAC
TCCTGAGCTCCAGCAGCGAAAGTCCTTCCCCAATGGAATCAAAACCCTCT
GTAGCCCGGATGATGGGACAATTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007390-T1.utr3p1 | KJC3_007390-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007390-T1.utr5p1 | KJC3_007390-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029058 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:2325059..2327255 - |
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