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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:2441502..2443149- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007429-T1 ID=KJC3_007429-T1|Name=KJC3_007429-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1648bp|location=Sequence derived from alignment at ch5:2441502..2443149- (Aspergillus niger KJC3)
ATGGATAACAACGACCAGTCCAACACAAGCAGCTCCATCGCCCTCATCGA
TAACACTGCGCCCCGTCGCCGTCACTCAGAAACTCCCACCGCTACAACAA
ACGGCGGCAGCCACGTCTCCCGAAAATGGACGAAAAGATCAATTCGCGGC
GAGCTCAAGAAGCGCAAGTACGCTAAATGGCAACCGGATCGATTAGGTCT
CACGACCGATGATGAAGACAACGACAACTACAACTACAACAATAATGAGG
GGGAGGAGAACATACCATCATCCAGCCGACGCCCCTCAGAAAGACCAGAA
ACAGATCTCTTCACTACAGAAACAGCAACCACCACCAGCAACCCCCCCTC
GCAATACCAAAGTCAAAGCGACAGCCAAAGCCGCAGTCCCAGCCAACAAC
CCTCACCCCCTTCGCACGACATAAGCGCCACAGATTTCGCCCCCGAAAGC
ACCCTCACCAACACCACCACTACACACTCCCACGGTCCCACAAAACTCAC
CGGCCTCAAACCCAACACCGAGCTCGACATCCTCTACGAGAACCAACGCG
GGTGGTTCTTCTTCGGCATCCCCCTCTACTCGCACAGCTCCCTCCTCAAT
TTCGACCCCTCCGCCTGGCAGACCGCCGATCTGCGCGACAGCCCCGTGGA
CATCACAAACGCGCAAGTGCCCGACCCCAGCTGGGTGTGGGCCTGGCGGT
CCTGGTACGTCGATATGTCCGGCGACGTGGACGACCAGGGATGGCAGTAT
TCGTTCTCGTTCAAGTCGACGGCATGGCATGGGTCACATCCGTGGTTTCA
TTCATTTGTGCGCCGGCGCAGATGGGTCCGAGTGAGGACGAAACGGTTGG
TGGATAGACATGGACGGACGGGGTTGGAGATGGCGCATAGGTTGAATGAG
GACTACTTCACGATTCATTCAGGGAAGAAGAAAAAGAGGCCAGTTAGTGA
GGTCGGTGGTGGTGGGTATGGGGCTACGAGTTTGGGTCGGACCACGACCG
CGACGACTACTAGGGAGGAAGAGGAGGTGCCGATAGAGGAGATAGCCGAT
GTCCCGGCCCTGATGCATGCGTTGAGAGTAGCGATTGTGGATCGCGAGAA
GGTGGATGCGTTGGATCGATTCGTCGAGGAGGGTGGCGAGGAGTTGTTTT
ATTTGGATGAGAAGGTAGTTCCCCTATACGCTTACCCCCAGATCGCCATT
TCCTTTCCCCTCGATATATCTCTTCCAGCAGATACTGACTACTGTTATAA
CTGTTCAGATCCCCGAAATCATGTCCATGTTCGTCTTCCAAGCCTCTCGC
TGGCACTTCGTGATCCACCTCACCGACGTCGTTGAGTCCCTCTCCCAGCG
ACTCTCCTCAGCCAGCGGCAACGAAGCCACCGAGCTGCAGCGCAAACTGA
ATCATCTCCAAAAGGCCACTGAAACAGCGAGACGCCATCTCACTGGCCCC
GGAGTTCTAAGGACTGAGAACCGGAAATCGAGCATGGAGATGCTGGATTT
AACACCCGTGTCTAAGCGCGGGAGTCTGTTGGCGAGGTACTCTGGCCGGT
TCGAGTTCAAGTCAATGGATGATGGTGGGGAGATTAAGGGGATTCCTAAG
GAGGCGGAGGTAGGCAGGGAAGGGCATATTTTCCAGTATTCTTCTTGA back to topCoding sequence (CDS) from alignment at ch5:2441502..2443149- >KJC3_007429-T1 ID=KJC3_007429-T1|Name=KJC3_007429-T1|organism=Aspergillus niger KJC3|type=CDS|length=3108bp|location=Sequence derived from alignment at ch5:2441502..2443149- (Aspergillus niger KJC3)
ATCCCCGAAATCATGTCCATGTTCGTCTTCCAAGCCTCTCGCTGGCACTT
CGTGATCCACCTCACCGACGTCGTTGAGTCCCTCTCCCAGCGACTCTCCT
CAGCCAGCGGCAACGAAGCCACCGAGCTGCAGCGCAAACTGAATCATCTC
CAAAAGGCCACTGAAACAGCGAGACGCCATCTCACTGGCCCCGGAGTTCT
AAGGACTGAGAACCGGAAATCGAGCATGGAGATGCTGGATTTAACACCCG
TGTCTAAGCGCGGGAGTCTGTTGGCGAGGTACTCTGGCCGGTTCGAGTTC
AAGTCAATGGATGATGGTGGGGAGATTAAGGGGATTCCTAAGGAGGCGGA
GGTAGGCAGGGAAGGGCATATTTTCCAGTATTCTTCTTGAATGGATAACA
ACGACCAGTCCAACACAAGCAGCTCCATCGCCCTCATCGATAACACTGCG
CCCCGTCGCCGTCACTCAGAAACTCCCACCGCTACAACAAACGGCGGCAG
CCACGTCTCCCGAAAATGGACGAAAAGATCAATTCGCGGCGAGCTCAAGA
AGCGCAAGTACGCTAAATGGCAACCGGATCGATTAGGTCTCACGACCGAT
GATGAAGACAACGACAACTACAACTACAACAATAATGAGGGGGAGGAGAA
CATACCATCATCCAGCCGACGCCCCTCAGAAAGACCAGAAACAGATCTCT
TCACTACAGAAACAGCAACCACCACCAGCAACCCCCCCTCGCAATACCAA
AGTCAAAGCGACAGCCAAAGCCGCAGTCCCAGCCAACAACCCTCACCCCC
TTCGCACGACATAAGCGCCACAGATTTCGCCCCCGAAAGCACCCTCACCA
ACACCACCACTACACACTCCCACGGTCCCACAAAACTCACCGGCCTCAAA
CCCAACACCGAGCTCGACATCCTCTACGAGAACCAACGCGGGTGGTTCTT
CTTCGGCATCCCCCTCTACTCGCACAGCTCCCTCCTCAATTTCGACCCCT
CCGCCTGGCAGACCGCCGATCTGCGCGACAGCCCCGTGGACATCACAAAC
GCGCAAGTGCCCGACCCCAGCTGGGTGTGGGCCTGGCGGTCCTGGTACGT
CGATATGTCCGGCGACGTGGACGACCAGGGATGGCAGTATTCGTTCTCGT
TCAAGTCGACGGCATGGCATGGGTCACATCCGTGGTTTCATTCATTTGTG
CGCCGGCGCAGATGGGTCCGAGTGAGGACGAAACGGTTGGTGGATAGACA
TGGACGGACGGGGTTGGAGATGGCGCATAGGTTGAATGAGGACTACTTCA
CGATTCATTCAGGGAAGAAGAAAAAGAGGCCAGTTAGTGAGGTCGGTGGT
GGTGGGTATGGGGCTACGAGTTTGGGTCGGACCACGACCGCGACGACTAC
TAGGGAGGAAGAGGAGGTGCCGATAGAGGAGATAGCCGATGTCCCGGCCC
TGATGCATGCGTTGAGAGTAGCGATTGTGGATCGCGAGAAGGTGGATGCG
TTGGATCGATTCGTCGAGGAGGGTGGCGAGGAGTTGTTTTATTTGGATGA
GAAGATCCCCGAAATCATGTCCATGTTCGTCTTCCAAGCCTCTCGCTGGC
ACTTCGTGATCCACCTCACCGACGTCGTTGAGTCCCTCTCCCAGCGACTC
TCCTCAGCCAGCGGCAACGAAGCCACCGAGCTGCAGCGCAAACTGAATCA
TCTCCAAAAGGCCACTGAAACAGCGAGACGCCATCTCACTGGCCCCGGAG
TTCTAAGGACTGAGAACCGGAAATCGAGCATGGAGATGCTGGATTTAACA
CCCGTGTCTAAGCGCGGGAGTCTGTTGGCGAGGTACTCTGGCCGGTTCGA
GTTCAAGTCAATGGATGATGGTGGGGAGATTAAGGGGATTCCTAAGGAGG
CGGAGGTAGGCAGGGAAGGGCATATTTTCCAGTATTCTTCTTGAATGGAT
AACAACGACCAGTCCAACACAAGCAGCTCCATCGCCCTCATCGATAACAC
TGCGCCCCGTCGCCGTCACTCAGAAACTCCCACCGCTACAACAAACGGCG
GCAGCCACGTCTCCCGAAAATGGACGAAAAGATCAATTCGCGGCGAGCTC
AAGAAGCGCAAGTACGCTAAATGGCAACCGGATCGATTAGGTCTCACGAC
CGATGATGAAGACAACGACAACTACAACTACAACAATAATGAGGGGGAGG
AGAACATACCATCATCCAGCCGACGCCCCTCAGAAAGACCAGAAACAGAT
CTCTTCACTACAGAAACAGCAACCACCACCAGCAACCCCCCCTCGCAATA
CCAAAGTCAAAGCGACAGCCAAAGCCGCAGTCCCAGCCAACAACCCTCAC
CCCCTTCGCACGACATAAGCGCCACAGATTTCGCCCCCGAAAGCACCCTC
ACCAACACCACCACTACACACTCCCACGGTCCCACAAAACTCACCGGCCT
CAAACCCAACACCGAGCTCGACATCCTCTACGAGAACCAACGCGGGTGGT
TCTTCTTCGGCATCCCCCTCTACTCGCACAGCTCCCTCCTCAATTTCGAC
CCCTCCGCCTGGCAGACCGCCGATCTGCGCGACAGCCCCGTGGACATCAC
AAACGCGCAAGTGCCCGACCCCAGCTGGGTGTGGGCCTGGCGGTCCTGGT
ACGTCGATATGTCCGGCGACGTGGACGACCAGGGATGGCAGTATTCGTTC
TCGTTCAAGTCGACGGCATGGCATGGGTCACATCCGTGGTTTCATTCATT
TGTGCGCCGGCGCAGATGGGTCCGAGTGAGGACGAAACGGTTGGTGGATA
GACATGGACGGACGGGGTTGGAGATGGCGCATAGGTTGAATGAGGACTAC
TTCACGATTCATTCAGGGAAGAAGAAAAAGAGGCCAGTTAGTGAGGTCGG
TGGTGGTGGGTATGGGGCTACGAGTTTGGGTCGGACCACGACCGCGACGA
CTACTAGGGAGGAAGAGGAGGTGCCGATAGAGGAGATAGCCGATGTCCCG
GCCCTGATGCATGCGTTGAGAGTAGCGATTGTGGATCGCGAGAAGGTGGA
TGCGTTGGATCGATTCGTCGAGGAGGGTGGCGAGGAGTTGTTTTATTTGG
ATGAGAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR006614 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:2441502..2443149 - |
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