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KJC3_007479-T1, KJC3_007479-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007479-T1
Unique NameKJC3_007479-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:2598956..2599579+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007479-T1 ID=KJC3_007479-T1|Name=KJC3_007479-T1|organism=Aspergillus niger KJC3|type=mRNA|length=624bp|location=Sequence derived from alignment at ch5:2598956..2599579+ (Aspergillus niger KJC3)
ATGGCGTCCCGATCCCCCACGGCGGTCACTCCCCTACCAAAATCATCCGT
CGCGCCCGAGACTCCGATGGTCAAGGACGCCCCCGCAACCCCCCAGGCCG
TTCCTTTTCCTTCTCCACAGACATTCGACATAGTCCCGCCGTTGCATGGC
CTCCTTTCGCGTCTTCTATCGCCGCCAACGAACGCTGCTGGAGTCTCCAA
TGGCGTGAGAGCGGCCGATGACCCTACCGGCGCTGCTGCTCCTACCGGTC
CGCCTTCAGGCACCCCTGGCCAACCTCAATCGCAGCAACAAGCCGGGTCC
GAGAACACCAACAATGCTGGAGTCCTGGGGACAGTGACTTCAGCTGGTCC
AGGCGGTGCAGAAATATCCGGCTTGGGCTCGAGTACCTCTCCAGCGCTCG
ATATCAAGGACCTTCCGACAGAGGTCAGCTCGATCAAGATTCGGATTCAG
AAGGCACAGGCCGTGGTGGAAAACTTACCAGACGTTGATCGGTCGGTTGC
TGATCAGGAAGAAGAAATCCAGGAGCTGGAGGACCGAATTGCAAAGCTCA
AATCGGTCATCTCCGACTTTGGCCAGATGGCAAGCTCAGGAGGTGCTAGG
AAGCACAAGTCCCAGGGACCTTGA
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Coding sequence (CDS) from alignment at ch5:2598956..2599579+

>KJC3_007479-T1 ID=KJC3_007479-T1|Name=KJC3_007479-T1|organism=Aspergillus niger KJC3|type=CDS|length=624bp|location=Sequence derived from alignment at ch5:2598956..2599579+ (Aspergillus niger KJC3)
ATGGCGTCCCGATCCCCCACGGCGGTCACTCCCCTACCAAAATCATCCGT
CGCGCCCGAGACTCCGATGGTCAAGGACGCCCCCGCAACCCCCCAGGCCG
TTCCTTTTCCTTCTCCACAGACATTCGACATAGTCCCGCCGTTGCATGGC
CTCCTTTCGCGTCTTCTATCGCCGCCAACGAACGCTGCTGGAGTCTCCAA
TGGCGTGAGAGCGGCCGATGACCCTACCGGCGCTGCTGCTCCTACCGGTC
CGCCTTCAGGCACCCCTGGCCAACCTCAATCGCAGCAACAAGCCGGGTCC
GAGAACACCAACAATGCTGGAGTCCTGGGGACAGTGACTTCAGCTGGTCC
AGGCGGTGCAGAAATATCCGGCTTGGGCTCGAGTACCTCTCCAGCGCTCG
ATATCAAGGACCTTCCGACAGAGGTCAGCTCGATCAAGATTCGGATTCAG
AAGGCACAGGCCGTGGTGGAAAACTTACCAGACGTTGATCGGTCGGTTGC
TGATCAGGAAGAAGAAATCCAGGAGCTGGAGGACCGAATTGCAAAGCTCA
AATCGGTCATCTCCGACTTTGGCCAGATGGCAAGCTCAGGAGGTGCTAGG
AAGCACAAGTCCCAGGGACCTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016592mediator complex
Vocabulary: Molecular Function
TermDefinition
GO:0003712transcription coregulator activity
Vocabulary: Biological Process
TermDefinition
GO:0006357regulation of transcription by RNA polymerase II
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007479KJC3_007479Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007479-T1.exon1KJC3_007479-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007479-T1.cdsKJC3_007479-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007479-T1KJC3_007479-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR011425
DBxrefPFAM:PF07544
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:2598956..2599579 +
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