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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch5:2888152..2889794- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007596-T1 ID=KJC3_007596-T1|Name=KJC3_007596-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1643bp|location=Sequence derived from alignment at ch5:2888152..2889794- (Aspergillus niger KJC3)
ATGTCTGCTCCCCCAACTGGCTGTCACCGAAAGGCTGCCTCTCAACAGCC
TACCTGCGACCAGATCGAGTCCGCATCAAACCCAAAAATCCTCACCGAAG
CCAATTGCTATTCAGAACTTGGGTTTTCATTCCCAAACATCAAAAAATGG
ACTATAATCCTCGTCATATTCCTCGTTCAGACATCCATGAACTTCAATAC
CAGCCTATATTCCAACGCCATATCAGGCATCTCCGAAGAATTCAACGTAA
GCAAGCAGGCAGCTCGCTGCGGTGCAATGATCTTCCTCATCTTATACGCA
TTTGGCTGTGAGCTCTGGGCGCCTTGGAGTGAAGAAATGGGCCGAAAGCC
TATCCTACAACTGAGCCTATTCCTGGTAAACATATGGCAAATCCCAGTCG
GCATCGCCCCCAATTTTGCCACCATCATGGTTGGTCGAGCGCTTGGTGGC
ATCTGTACAGCCGGCGGCTCTGTCACCCTGGGCATGATAGCAGATCTATG
GGAGCCAGATGACCAGCAGTACGCAGTGGCATGCGTGGTGTTTTCATCTG
TTGGTGGATCAGTCCTTGGCCCGGTGGTCGGGGGTTTCGTGGAAGCATAT
CTCCCATGGCGATGGAATATCTGGATCCAGCTTATCTTCGGCGGCTTCGT
CCAGCTGGCGCATTTGATACTCGTTCCGGAAACAAGAACATCAGTCATGA
TTGACAGGATTGCTAAGCAGCGACGAGAAAAGGGAGAGGATGTGTACGGA
CCGACGGAATTGATCCCTCTAAAGGACCGCTTTTCAGGGAAGGAAATTGT
CGGGACCTGGCTTCGACCATTCCACATGCTCCTCACTGAGCCTATTGTGC
TGTGTCTCTCCCTACTTAGTGGCTTTACTGATGCTCTGATCTTCATATTC
ATCCAATCCTTCGGTCTCGTGTACGCACAATGGAACTTCAGCACTGTCGC
CGTCGGCCTCTCCTTTCTTCCAATCATGATAGGCTACGTTATCACCTGGA
TCATGGTCATCCCAGTTATCAAACGCAACATTCACGAACGTCGCAGCAAG
CCCAACGACGAGAGAGCCCAATACGAATCTCGACTCTGGTGGCTCCTTTA
CACTGCGCCATGTCTTCCCATCGGACTTATTGGCTTCGCATGGACGAGTC
TCCCGCAAACTCATTGGGTTGGCAGCATGTTCTTCTCAGCCTTGGTTGGT
ATAGCCAACTTTAGCATCTTTATGGCCACGATCGACTATATGATCTGTGC
TTATGGGCCGTACTCTGCGTCTGCCACCGGAGGTAATGGGTGGGCCAGGG
ACTTTCTGGCCGGTGTGTTGACTGTCCCTGCGACACCTTTCTATGAGAGT
ATGCCAACCTTCAAGTCAAAGATATTTGCTTGCGTATAGTGTGCTGACGT
ATGCTACAGATATTGGTGGGAAGTACCATCTGGAATATGCGTCCACGATT
CTATGTAAGCCACCGTTTTCTCTGTTGCAGCATGTCACTGATTCAATGTA
TAGTCTGCATATCCATGATCCTTGTGGCAACGGTATACGTTGTCTACTTC
TATGGACCAACCCTTCGCAAACGGTCCCCGTTCGCCCAGAAGTTGCTCCA
TGAGAGGGCAGACATACACGCGATGATGGAGCACAACAAGTAG back to topCoding sequence (CDS) from alignment at ch5:2888152..2889794- >KJC3_007596-T1 ID=KJC3_007596-T1|Name=KJC3_007596-T1|organism=Aspergillus niger KJC3|type=CDS|length=4599bp|location=Sequence derived from alignment at ch5:2888152..2889794- (Aspergillus niger KJC3)
TCTGCATATCCATGATCCTTGTGGCAACGGTATACGTTGTCTACTTCTAT
GGACCAACCCTTCGCAAACGGTCCCCGTTCGCCCAGAAGTTGCTCCATGA
GAGGGCAGACATACACGCGATGATGGAGCACAACAAGTAGATATTGGTGG
GAAGTACCATCTGGAATATGCGTCCACGATTCTATATGTCTGCTCCCCCA
ACTGGCTGTCACCGAAAGGCTGCCTCTCAACAGCCTACCTGCGACCAGAT
CGAGTCCGCATCAAACCCAAAAATCCTCACCGAAGCCAATTGCTATTCAG
AACTTGGGTTTTCATTCCCAAACATCAAAAAATGGACTATAATCCTCGTC
ATATTCCTCGTTCAGACATCCATGAACTTCAATACCAGCCTATATTCCAA
CGCCATATCAGGCATCTCCGAAGAATTCAACGTAAGCAAGCAGGCAGCTC
GCTGCGGTGCAATGATCTTCCTCATCTTATACGCATTTGGCTGTGAGCTC
TGGGCGCCTTGGAGTGAAGAAATGGGCCGAAAGCCTATCCTACAACTGAG
CCTATTCCTGGTAAACATATGGCAAATCCCAGTCGGCATCGCCCCCAATT
TTGCCACCATCATGGTTGGTCGAGCGCTTGGTGGCATCTGTACAGCCGGC
GGCTCTGTCACCCTGGGCATGATAGCAGATCTATGGGAGCCAGATGACCA
GCAGTACGCAGTGGCATGCGTGGTGTTTTCATCTGTTGGTGGATCAGTCC
TTGGCCCGGTGGTCGGGGGTTTCGTGGAAGCATATCTCCCATGGCGATGG
AATATCTGGATCCAGCTTATCTTCGGCGGCTTCGTCCAGCTGGCGCATTT
GATACTCGTTCCGGAAACAAGAACATCAGTCATGATTGACAGGATTGCTA
AGCAGCGACGAGAAAAGGGAGAGGATGTGTACGGACCGACGGAATTGATC
CCTCTAAAGGACCGCTTTTCAGGGAAGGAAATTGTCGGGACCTGGCTTCG
ACCATTCCACATGCTCCTCACTGAGCCTATTGTGCTGTGTCTCTCCCTAC
TTAGTGGCTTTACTGATGCTCTGATCTTCATATTCATCCAATCCTTCGGT
CTCGTGTACGCACAATGGAACTTCAGCACTGTCGCCGTCGGCCTCTCCTT
TCTTCCAATCATGATAGGCTACGTTATCACCTGGATCATGGTCATCCCAG
TTATCAAACGCAACATTCACGAACGTCGCAGCAAGCCCAACGACGAGAGA
GCCCAATACGAATCTCGACTCTGGTGGCTCCTTTACACTGCGCCATGTCT
TCCCATCGGACTTATTGGCTTCGCATGGACGAGTCTCCCGCAAACTCATT
GGGTTGGCAGCATGTTCTTCTCAGCCTTGGTTGGTATAGCCAACTTTAGC
ATCTTTATGGCCACGATCGACTATATGATCTGTGCTTATGGGCCGTACTC
TGCGTCTGCCACCGGAGGTAATGGGTGGGCCAGGGACTTTCTGGCCGGTG
TGTTGACTGTCCCTGCGACACCTTTCTATGAGATCTGCATATCCATGATC
CTTGTGGCAACGGTATACGTTGTCTACTTCTATGGACCAACCCTTCGCAA
ACGGTCCCCGTTCGCCCAGAAGTTGCTCCATGAGAGGGCAGACATACACG
CGATGATGGAGCACAACAAGTAGATATTGGTGGGAAGTACCATCTGGAAT
ATGCGTCCACGATTCTATATGTCTGCTCCCCCAACTGGCTGTCACCGAAA
GGCTGCCTCTCAACAGCCTACCTGCGACCAGATCGAGTCCGCATCAAACC
CAAAAATCCTCACCGAAGCCAATTGCTATTCAGAACTTGGGTTTTCATTC
CCAAACATCAAAAAATGGACTATAATCCTCGTCATATTCCTCGTTCAGAC
ATCCATGAACTTCAATACCAGCCTATATTCCAACGCCATATCAGGCATCT
CCGAAGAATTCAACGTAAGCAAGCAGGCAGCTCGCTGCGGTGCAATGATC
TTCCTCATCTTATACGCATTTGGCTGTGAGCTCTGGGCGCCTTGGAGTGA
AGAAATGGGCCGAAAGCCTATCCTACAACTGAGCCTATTCCTGGTAAACA
TATGGCAAATCCCAGTCGGCATCGCCCCCAATTTTGCCACCATCATGGTT
GGTCGAGCGCTTGGTGGCATCTGTACAGCCGGCGGCTCTGTCACCCTGGG
CATGATAGCAGATCTATGGGAGCCAGATGACCAGCAGTACGCAGTGGCAT
GCGTGGTGTTTTCATCTGTTGGTGGATCAGTCCTTGGCCCGGTGGTCGGG
GGTTTCGTGGAAGCATATCTCCCATGGCGATGGAATATCTGGATCCAGCT
TATCTTCGGCGGCTTCGTCCAGCTGGCGCATTTGATACTCGTTCCGGAAA
CAAGAACATCAGTCATGATTGACAGGATTGCTAAGCAGCGACGAGAAAAG
GGAGAGGATGTGTACGGACCGACGGAATTGATCCCTCTAAAGGACCGCTT
TTCAGGGAAGGAAATTGTCGGGACCTGGCTTCGACCATTCCACATGCTCC
TCACTGAGCCTATTGTGCTGTGTCTCTCCCTACTTAGTGGCTTTACTGAT
GCTCTGATCTTCATATTCATCCAATCCTTCGGTCTCGTGTACGCACAATG
GAACTTCAGCACTGTCGCCGTCGGCCTCTCCTTTCTTCCAATCATGATAG
GCTACGTTATCACCTGGATCATGGTCATCCCAGTTATCAAACGCAACATT
CACGAACGTCGCAGCAAGCCCAACGACGAGAGAGCCCAATACGAATCTCG
ACTCTGGTGGCTCCTTTACACTGCGCCATGTCTTCCCATCGGACTTATTG
GCTTCGCATGGACGAGTCTCCCGCAAACTCATTGGGTTGGCAGCATGTTC
TTCTCAGCCTTGGTTGGTATAGCCAACTTTAGCATCTTTATGGCCACGAT
CGACTATATGATCTGTGCTTATGGGCCGTACTCTGCGTCTGCCACCGGAG
GTAATGGGTGGGCCAGGGACTTTCTGGCCGGTGTGTTGACTGTCCCTGCG
ACACCTTTCTATGAGATCTGCATATCCATGATCCTTGTGGCAACGGTATA
CGTTGTCTACTTCTATGGACCAACCCTTCGCAAACGGTCCCCGTTCGCCC
AGAAGTTGCTCCATGAGAGGGCAGACATACACGCGATGATGGAGCACAAC
AAGTAGATATTGGTGGGAAGTACCATCTGGAATATGCGTCCACGATTCTA
TATGTCTGCTCCCCCAACTGGCTGTCACCGAAAGGCTGCCTCTCAACAGC
CTACCTGCGACCAGATCGAGTCCGCATCAAACCCAAAAATCCTCACCGAA
GCCAATTGCTATTCAGAACTTGGGTTTTCATTCCCAAACATCAAAAAATG
GACTATAATCCTCGTCATATTCCTCGTTCAGACATCCATGAACTTCAATA
CCAGCCTATATTCCAACGCCATATCAGGCATCTCCGAAGAATTCAACGTA
AGCAAGCAGGCAGCTCGCTGCGGTGCAATGATCTTCCTCATCTTATACGC
ATTTGGCTGTGAGCTCTGGGCGCCTTGGAGTGAAGAAATGGGCCGAAAGC
CTATCCTACAACTGAGCCTATTCCTGGTAAACATATGGCAAATCCCAGTC
GGCATCGCCCCCAATTTTGCCACCATCATGGTTGGTCGAGCGCTTGGTGG
CATCTGTACAGCCGGCGGCTCTGTCACCCTGGGCATGATAGCAGATCTAT
GGGAGCCAGATGACCAGCAGTACGCAGTGGCATGCGTGGTGTTTTCATCT
GTTGGTGGATCAGTCCTTGGCCCGGTGGTCGGGGGTTTCGTGGAAGCATA
TCTCCCATGGCGATGGAATATCTGGATCCAGCTTATCTTCGGCGGCTTCG
TCCAGCTGGCGCATTTGATACTCGTTCCGGAAACAAGAACATCAGTCATG
ATTGACAGGATTGCTAAGCAGCGACGAGAAAAGGGAGAGGATGTGTACGG
ACCGACGGAATTGATCCCTCTAAAGGACCGCTTTTCAGGGAAGGAAATTG
TCGGGACCTGGCTTCGACCATTCCACATGCTCCTCACTGAGCCTATTGTG
CTGTGTCTCTCCCTACTTAGTGGCTTTACTGATGCTCTGATCTTCATATT
CATCCAATCCTTCGGTCTCGTGTACGCACAATGGAACTTCAGCACTGTCG
CCGTCGGCCTCTCCTTTCTTCCAATCATGATAGGCTACGTTATCACCTGG
ATCATGGTCATCCCAGTTATCAAACGCAACATTCACGAACGTCGCAGCAA
GCCCAACGACGAGAGAGCCCAATACGAATCTCGACTCTGGTGGCTCCTTT
ACACTGCGCCATGTCTTCCCATCGGACTTATTGGCTTCGCATGGACGAGT
CTCCCGCAAACTCATTGGGTTGGCAGCATGTTCTTCTCAGCCTTGGTTGG
TATAGCCAACTTTAGCATCTTTATGGCCACGATCGACTATATGATCTGTG
CTTATGGGCCGTACTCTGCGTCTGCCACCGGAGGTAATGGGTGGGCCAGG
GACTTTCTGGCCGGTGTGTTGACTGTCCCTGCGACACCTTTCTATGAGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch5 | supercontig | ch5:2888152..2889794 - |
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