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KJC3_007744-T1, KJC3_007744-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_007744-T1
Unique NameKJC3_007744-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch5:3249656..3251338-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_007744-T1 ID=KJC3_007744-T1|Name=KJC3_007744-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1683bp|location=Sequence derived from alignment at ch5:3249656..3251338- (Aspergillus niger KJC3)
ATGGCATCTTGGTTGATTGACACCCCGCTGGGAGAGCTCATCCGGGTATC
TATAGGATCGCGATGGTTACCCTTCCCCGAAGAACAAGAGGACTGGATCC
TCAGAAATGCTGGCTTTGCCGACGGTGAGAAGAACGAGCAGCCATTGCAG
CAACAACTGTGCCCCCTTCCCGCCCAACTCGTGGGCTGGTATGGAATCGA
TGACCCGGCCAATCCCCAAAATTGGTCGCCCGTGAAGAAGGCTCGGGTCT
ATTTGACCATAAACTATTGCGCCTGCACGGTTTATATGTCCTCCAGCATT
TATACTTCGTCCCAGGATGCGGTAGAAGAGATCTTTCATACTTCTAGCAC
TGTGGCCAGTCTTGGTCTCGCCTTGTTTGTGCTGGCATATGGAATTGGTC
CCCTCTTATTCGCACCTATCTCCGAGGTACATTCAATTGGACGTAATATT
CCATATATTATTTCTCTGGCGATCTTCATCATCATATCTGTGGTCACGGC
CACGGCATCAAATTTGGGTGGCCTGCTAACGTTGCGCTTCTTGCAAGGCT
TCTTCGGCTCGCCTGCCCTCGCAACCGGGGGTGCATCGTTGTCAGATGTG
AGCGATACAGTCTGGAAGCCGTTCGCTCTGTACACTTGGGCCTTCTTCTC
TTTCGTGGGACCGTCGATCGGGCCCGTGCTTAGTACGGTGGCCGTAGAAA
GGCTCGGATGGAGGTGGAGTCTGTGGGAGATTGTCTTTCTCACCACCCCG
GCATTCCTGTTGATGGCAAGTGCCGCCTAACCAACCCCCCCCTTTCCGTC
TCTCTCCCTCTCTCCGGGCGGAGATTATAGGCCATATTGACTGACTGGCA
GGTCCACCGAGCAGCTCATTCTTCCCGAAACATCTGCCCCAAACATCCTG
TACCGCCGTGCTCAACGCCTGAATCGGCGCTTCCCTGGGCGTGAGTTTCA
TCTGGCCGAGGACAGCACAGTGCCCGACCGTCGGGGGCTGCAGGCCATGC
TTGTGCAGGCCCTGGTCACTCCGTGGCAAGTGCATCTGCTCTCTCCGGCG
ATCATGTTCAGCAGTCTCTACTGCGGTCTCGTATATGGCATTTTCTACAC
GTTTTTCGAGACCTTTCCGATTGCCTACACTGAGATCCATCACATGAGCT
CGGTCTCTACGGCGCTCGTGTACTTGTCAACCATGATCGCGGTTATCCTG
GTGGGTATTCCCTACCTTATCTACATCTACTGTGTGGTCAATCCGATCGT
CGCGCGCGGCGAGCGTATTACCCCCGAATGGCGGCTAATCCCGGCGGTGA
TCGCGTCGTTTATTATCCCGGCGGGTCTTTTCCTCTTCTCCTGGACGGTG
CGGACAGACATCCACTGGATGGTCCCTACTATTGGGGTGGTCTTCGCCAC
GGGTGGCATGTGCATTGTGCTACAGAGCATTTTTGTGTACATTACACTGG
CATACACACAGTATGCGGCCTCAATCCTTGGGGGCAATGGTTTTATAAAA
TCGTGTGTGGCATGCGCCGCCATCTTGTGGTCTGCTCCTCTATATGATGA
CATGGGGCTTCCCGTTGGTGTGTCAATTCTGGGAGCGTTGTGTGTCCTGG
GAGTGGTAGGCATCGTCTTGTTGTACAGGTTCGGAGGGATTCTCCGCGCA
AGGAGCCGGTTCGCACAGTGGAATGAGAAATAG
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Coding sequence (CDS) from alignment at ch5:3249656..3251338-

>KJC3_007744-T1 ID=KJC3_007744-T1|Name=KJC3_007744-T1|organism=Aspergillus niger KJC3|type=CDS|length=3180bp|location=Sequence derived from alignment at ch5:3249656..3251338- (Aspergillus niger KJC3)
GTCCACCGAGCAGCTCATTCTTCCCGAAACATCTGCCCCAAACATCCTGT
ACCGCCGTGCTCAACGCCTGAATCGGCGCTTCCCTGGGCGTGAGTTTCAT
CTGGCCGAGGACAGCACAGTGCCCGACCGTCGGGGGCTGCAGGCCATGCT
TGTGCAGGCCCTGGTCACTCCGTGGCAAGTGCATCTGCTCTCTCCGGCGA
TCATGTTCAGCAGTCTCTACTGCGGTCTCGTATATGGCATTTTCTACACG
TTTTTCGAGACCTTTCCGATTGCCTACACTGAGATCCATCACATGAGCTC
GGTCTCTACGGCGCTCGTGTACTTGTCAACCATGATCGCGGTTATCCTGG
TGGGTATTCCCTACCTTATCTACATCTACTGTGTGGTCAATCCGATCGTC
GCGCGCGGCGAGCGTATTACCCCCGAATGGCGGCTAATCCCGGCGGTGAT
CGCGTCGTTTATTATCCCGGCGGGTCTTTTCCTCTTCTCCTGGACGGTGC
GGACAGACATCCACTGGATGGTCCCTACTATTGGGGTGGTCTTCGCCACG
GGTGGCATGTGCATTGTGCTACAGAGCATTTTTGTGTACATTACACTGGC
ATACACACAGTATGCGGCCTCAATCCTTGGGGGCAATGGTTTTATAAAAT
CGTGTGTGGCATGCGCCGCCATCTTGTGGTCTGCTCCTCTATATGATGAC
ATGGGGCTTCCCGTTGGTGTGTCAATTCTGGGAGCGTTGTGTGTCCTGGG
AGTGGTAGGCATCGTCTTGTTGTACAGGTTCGGAGGGATTCTCCGCGCAA
GGAGCCGGTTCGCACAGTGGAATGAGAAATAGATGGCATCTTGGTTGATT
GACACCCCGCTGGGAGAGCTCATCCGGGTATCTATAGGATCGCGATGGTT
ACCCTTCCCCGAAGAACAAGAGGACTGGATCCTCAGAAATGCTGGCTTTG
CCGACGGTGAGAAGAACGAGCAGCCATTGCAGCAACAACTGTGCCCCCTT
CCCGCCCAACTCGTGGGCTGGTATGGAATCGATGACCCGGCCAATCCCCA
AAATTGGTCGCCCGTGAAGAAGGCTCGGGTCTATTTGACCATAAACTATT
GCGCCTGCACGGTTTATATGTCCTCCAGCATTTATACTTCGTCCCAGGAT
GCGGTAGAAGAGATCTTTCATACTTCTAGCACTGTGGCCAGTCTTGGTCT
CGCCTTGTTTGTGCTGGCATATGGAATTGGTCCCCTCTTATTCGCACCTA
TCTCCGAGGTACATTCAATTGGACGTAATATTCCATATATTATTTCTCTG
GCGATCTTCATCATCATATCTGTGGTCACGGCCACGGCATCAAATTTGGG
TGGCCTGCTAACGTTGCGCTTCTTGCAAGGCTTCTTCGGCTCGCCTGCCC
TCGCAACCGGGGGTGCATCGTTGTCAGATGTGAGCGATACAGTCTGGAAG
CCGTTCGCTCTGTACACTTGGGCCTTCTTCTCTTTCGTGGGACCGTCGAT
CGGGCCCGTGCTTAGTACGGTGGCCGTAGAAAGGCTCGGATGGAGGTGGA
GTCTGTGGGAGATTGTCTTTCTCACCACCCCGGCATTCCTGTCCACCGAG
CAGCTCATTCTTCCCGAAACATCTGCCCCAAACATCCTGTACCGCCGTGC
TCAACGCCTGAATCGGCGCTTCCCTGGGCGTGAGTTTCATCTGGCCGAGG
ACAGCACAGTGCCCGACCGTCGGGGGCTGCAGGCCATGCTTGTGCAGGCC
CTGGTCACTCCGTGGCAAGTGCATCTGCTCTCTCCGGCGATCATGTTCAG
CAGTCTCTACTGCGGTCTCGTATATGGCATTTTCTACACGTTTTTCGAGA
CCTTTCCGATTGCCTACACTGAGATCCATCACATGAGCTCGGTCTCTACG
GCGCTCGTGTACTTGTCAACCATGATCGCGGTTATCCTGGTGGGTATTCC
CTACCTTATCTACATCTACTGTGTGGTCAATCCGATCGTCGCGCGCGGCG
AGCGTATTACCCCCGAATGGCGGCTAATCCCGGCGGTGATCGCGTCGTTT
ATTATCCCGGCGGGTCTTTTCCTCTTCTCCTGGACGGTGCGGACAGACAT
CCACTGGATGGTCCCTACTATTGGGGTGGTCTTCGCCACGGGTGGCATGT
GCATTGTGCTACAGAGCATTTTTGTGTACATTACACTGGCATACACACAG
TATGCGGCCTCAATCCTTGGGGGCAATGGTTTTATAAAATCGTGTGTGGC
ATGCGCCGCCATCTTGTGGTCTGCTCCTCTATATGATGACATGGGGCTTC
CCGTTGGTGTGTCAATTCTGGGAGCGTTGTGTGTCCTGGGAGTGGTAGGC
ATCGTCTTGTTGTACAGGTTCGGAGGGATTCTCCGCGCAAGGAGCCGGTT
CGCACAGTGGAATGAGAAATAGATGGCATCTTGGTTGATTGACACCCCGC
TGGGAGAGCTCATCCGGGTATCTATAGGATCGCGATGGTTACCCTTCCCC
GAAGAACAAGAGGACTGGATCCTCAGAAATGCTGGCTTTGCCGACGGTGA
GAAGAACGAGCAGCCATTGCAGCAACAACTGTGCCCCCTTCCCGCCCAAC
TCGTGGGCTGGTATGGAATCGATGACCCGGCCAATCCCCAAAATTGGTCG
CCCGTGAAGAAGGCTCGGGTCTATTTGACCATAAACTATTGCGCCTGCAC
GGTTTATATGTCCTCCAGCATTTATACTTCGTCCCAGGATGCGGTAGAAG
AGATCTTTCATACTTCTAGCACTGTGGCCAGTCTTGGTCTCGCCTTGTTT
GTGCTGGCATATGGAATTGGTCCCCTCTTATTCGCACCTATCTCCGAGGT
ACATTCAATTGGACGTAATATTCCATATATTATTTCTCTGGCGATCTTCA
TCATCATATCTGTGGTCACGGCCACGGCATCAAATTTGGGTGGCCTGCTA
ACGTTGCGCTTCTTGCAAGGCTTCTTCGGCTCGCCTGCCCTCGCAACCGG
GGGTGCATCGTTGTCAGATGTGAGCGATACAGTCTGGAAGCCGTTCGCTC
TGTACACTTGGGCCTTCTTCTCTTTCGTGGGACCGTCGATCGGGCCCGTG
CTTAGTACGGTGGCCGTAGAAAGGCTCGGATGGAGGTGGAGTCTGTGGGA
GATTGTCTTTCTCACCACCCCGGCATTCCT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_007744KJC3_007744Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007744-T1KJC3_007744-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007744-T1.cdsKJC3_007744-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_007744-T1.exon2KJC3_007744-T1.exon2Aspergillus niger KJC3exon
KJC3_007744-T1.exon1KJC3_007744-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch5supercontigch5:3249656..3251338 -
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