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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:308781..311319- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007865-T1 ID=KJC3_007865-T1|Name=KJC3_007865-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2539bp|location=Sequence derived from alignment at ch6:308781..311319- (Aspergillus niger KJC3)
TACAATTGATGCTATAACTCTATCCTCAACAGGCATTGAACGTCTCAGCC
AGACAATTTCTTATTTGGGGAACCGATAAGATAGCCGATAAGATAAGAAG
TCACATGATCACAGGCCCACCGCTTCGGGAGGGTCAATCGAACTTTTTTT
CGCCTCTTCTTTGACTCTTTGCTTGCGGCATCGCTCACGTCCCCTTGTCA
CCACTCCGTCTCCGTCGGTCGCTGCAAAGATGAAATACGTTCTGGTTTCC
GGAGGTAAGCTCAATTGCTCGACTCGGCTGGAAACCAGCGGAGTTGCCAG
GGTCCCTCGCGTCGTGCCCTCTTGCTAACGAACCGCCCGTCCCTCAGGTG
TCATCTCCGGCGTGGGCAAGGGCATCATTGCCTCCAGCACCGGTCTCCTG
CTCAAGACCACCGGTCTGGCCGTCACCAGTATCAAGATCGACCCTTACAT
CAACATCGATGCGGGCACAATGGCACCTACTGAGTCAGTATCTGCGTGGC
TTTCGGCTTCTCGGTGACACACACCTTATTGACATCACCCCCACTATGCT
AGGCACGGTGAGGTCTATGTCACAGACGACGGCGGTGAAATGGACCTCGA
CCTTGGCAACTACGAGCGCTACCTCCTCTCCTCTCTCTCCCGCGATCACA
ACATCACCACCGGAAAGGTCTACCAGCACGTCATCAACCGCGAGCGCATT
GGCCATTATCTCGGTAAGACCGTGCAGGTCGTGCCCCACGTCACCGATGC
CATTCAGGAGTGGATTCAGCGGGTAGCCAAGATCCCCGTCGACGAGTCCA
AGGCCGAGCCGGATGTCTGCATCATCGAGCTGGGTGGTACCGTCGGTGAC
ATTGAGAGTGCCCCGTTCATCCACGCTCTGAGCCAGCTCCAGAGAAAGGC
GGGCAAGGGCAACTTTGTCCAGATCCACGTCTCCTACGTGCCGGTCATCC
CGCCGGGACCTGGTGGTGAGCAGAAGACGAAACCCACGCAGAGGGCAATC
AGCGATGTGCGGAGTGCTGGTCTCAACCCCGACCTGATTGCTTGTCGCTG
CGAGCAACCTCTGGAAGATAGCACCATCCAGAAGATCGCCAATATGTGCT
CCGTCGAGCAGCACCAGGTCATTGCCGTTCACAACGTCACGACGACATAC
CACGTGCCTATGCTCCTCGAGAAGCAGAAGCTTATCAGCACCATCACCGA
TATGCTCGACTTGAAGTCGATCCCGCAGACCCCTGAGCGCAAGGAGCAGG
GTAGCCGCATGTGGAACGACTGGTGCGATCTTGCTCGTGGCCAGGACTTC
CTCCACGATTCCGTCTCCATTGCCCTGGTTGGCAAATACACTTCCCTTCA
CGATGCCTACATCAGTGTCTCCAAGGCTCTGGAGCACGCGGCCATGTACT
GCCACAAAAAGGTTCAGATCATCTGGGTCGACTCGTCGCATCTGGAAGAT
GACACCGCCTCCCCGGCCGATTACCACAAGGCCTGGCACGCGGTCTGCAC
GGCCGACGGTGTCCTGGTGCCCGGTGGTTTCGGTAACAGAGGTACTGAGG
GTATGATGAAGGCCATCACATGGGCGCGTACCAACAACAAGCCGTTCCTG
GGTGTCTGCCTGGGTATGCAGCTGGCCGTGCTGGAGTTCTGCCGCAACGT
CGCCAACATTAAGGATGTCGGCAGTGAGGAGCTGCACCCGAAGGCCGAGA
ACCACGCCATTGTCTACATGCCCGAGGTCGACAAGGGCAAGCTCGGTGGA
ACCATGCGTCTTGGCAGACACCCCTGCGTCTTCCAGGAGAACACCGAGTG
GTCTCGTCTGCGGAGTCTGTACGGACCCTCCGTCTCGCAGATTGAGGAGC
GCCACCGCCATCGCTACGAGGTCAACCCTGAGATGATCGAGCAGATCGAG
AAGGCCGGTCTCTCCTTCATTGGAAAGGACATCAAGGGTGAGCGTATGGA
GATTGTCGAGATCAAGGACCACCCCTGGTTCGTGGGTGTGCAGTTCCACC
CCGAGTACCTCAGTCGGGTCTTGAGCCCCAGCCGGGCTTTCCTCGGTTTC
TTTGCCGCCGCTGCGGGATGCCTCGATGAGGTCTCCAAGGCAGTTGTGCA
GGGTCAGCGGAGCATTGGCCGCAAGCAATAGATCTCTTTGGCGGAGGAGC
GGTATTTTGCTGGAGTTCTGGTGAGAAGGATACTGTTGGCGGTACACACC
GTCTGGGTTTTTCTGTTGTCTGTCTGGGGCAGGTCTTGAGCGCTGCCTCA
TGCCGTTGAGGCAGCCCCAATCTATACGACTTCAGGCCGTATGGCAGGAT
CGCGTGAGGATACCCTTGACAAAGACCTGAAGCGTCACCCAGGTCGATCA
GGTCATCACGACGCTGCACAAAAAGGAATCGAAAATAATATGTCGGAAGT
TGTCTGTTTCCTCAGGTTATGCTTTTGTTGAGATTGCAGGACTTTTTGAC
TACGTGATATCACTATAATATAAAAGTATTGAGACGGCCGGTCCATTGAT
AGATTAAATCAATACAATAGATTAGATTTTGGTGCTAGG back to topCoding sequence (CDS) from alignment at ch6:308781..311319- >KJC3_007865-T1 ID=KJC3_007865-T1|Name=KJC3_007865-T1|organism=Aspergillus niger KJC3|type=CDS|length=5220bp|location=Sequence derived from alignment at ch6:308781..311319- (Aspergillus niger KJC3)
GCACGGTGAGGTCTATGTCACAGACGACGGCGGTGAAATGGACCTCGACC
TTGGCAACTACGAGCGCTACCTCCTCTCCTCTCTCTCCCGCGATCACAAC
ATCACCACCGGAAAGGTCTACCAGCACGTCATCAACCGCGAGCGCATTGG
CCATTATCTCGGTAAGACCGTGCAGGTCGTGCCCCACGTCACCGATGCCA
TTCAGGAGTGGATTCAGCGGGTAGCCAAGATCCCCGTCGACGAGTCCAAG
GCCGAGCCGGATGTCTGCATCATCGAGCTGGGTGGTACCGTCGGTGACAT
TGAGAGTGCCCCGTTCATCCACGCTCTGAGCCAGCTCCAGAGAAAGGCGG
GCAAGGGCAACTTTGTCCAGATCCACGTCTCCTACGTGCCGGTCATCCCG
CCGGGACCTGGTGGTGAGCAGAAGACGAAACCCACGCAGAGGGCAATCAG
CGATGTGCGGAGTGCTGGTCTCAACCCCGACCTGATTGCTTGTCGCTGCG
AGCAACCTCTGGAAGATAGCACCATCCAGAAGATCGCCAATATGTGCTCC
GTCGAGCAGCACCAGGTCATTGCCGTTCACAACGTCACGACGACATACCA
CGTGCCTATGCTCCTCGAGAAGCAGAAGCTTATCAGCACCATCACCGATA
TGCTCGACTTGAAGTCGATCCCGCAGACCCCTGAGCGCAAGGAGCAGGGT
AGCCGCATGTGGAACGACTGGTGCGATCTTGCTCGTGGCCAGGACTTCCT
CCACGATTCCGTCTCCATTGCCCTGGTTGGCAAATACACTTCCCTTCACG
ATGCCTACATCAGTGTCTCCAAGGCTCTGGAGCACGCGGCCATGTACTGC
CACAAAAAGGTTCAGATCATCTGGGTCGACTCGTCGCATCTGGAAGATGA
CACCGCCTCCCCGGCCGATTACCACAAGGCCTGGCACGCGGTCTGCACGG
CCGACGGTGTCCTGGTGCCCGGTGGTTTCGGTAACAGAGGTACTGAGGGT
ATGATGAAGGCCATCACATGGGCGCGTACCAACAACAAGCCGTTCCTGGG
TGTCTGCCTGGGTATGCAGCTGGCCGTGCTGGAGTTCTGCCGCAACGTCG
CCAACATTAAGGATGTCGGCAGTGAGGAGCTGCACCCGAAGGCCGAGAAC
CACGCCATTGTCTACATGCCCGAGGTCGACAAGGGCAAGCTCGGTGGAAC
CATGCGTCTTGGCAGACACCCCTGCGTCTTCCAGGAGAACACCGAGTGGT
CTCGTCTGCGGAGTCTGTACGGACCCTCCGTCTCGCAGATTGAGGAGCGC
CACCGCCATCGCTACGAGGTCAACCCTGAGATGATCGAGCAGATCGAGAA
GGCCGGTCTCTCCTTCATTGGAAAGGACATCAAGGGTGAGCGTATGGAGA
TTGTCGAGATCAAGGACCACCCCTGGTTCGTGGGTGTGCAGTTCCACCCC
GAGTACCTCAGTCGGGTCTTGAGCCCCAGCCGGGCTTTCCTCGGTTTCTT
TGCCGCCGCTGCGGGATGCCTCGATGAGGTCTCCAAGGCAGTTGTGCAGG
GTCAGCGGAGCATTGGCCGCAAGCAATAGGTGTCATCTCCGGCGTGGGCA
AGGGCATCATTGCCTCCAGCACCGGTCTCCTGCTCAAGACCACCGGTCTG
GCCGTCACCAGTATCAAGATCGACCCTTACATCAACATCGATGCGGGCAC
AATGGCACCTACTGAATGAAATACGTTCTGGTTTCCGGAGGCACGGTGAG
GTCTATGTCACAGACGACGGCGGTGAAATGGACCTCGACCTTGGCAACTA
CGAGCGCTACCTCCTCTCCTCTCTCTCCCGCGATCACAACATCACCACCG
GAAAGGTCTACCAGCACGTCATCAACCGCGAGCGCATTGGCCATTATCTC
GGTAAGACCGTGCAGGTCGTGCCCCACGTCACCGATGCCATTCAGGAGTG
GATTCAGCGGGTAGCCAAGATCCCCGTCGACGAGTCCAAGGCCGAGCCGG
ATGTCTGCATCATCGAGCTGGGTGGTACCGTCGGTGACATTGAGAGTGCC
CCGTTCATCCACGCTCTGAGCCAGCTCCAGAGAAAGGCGGGCAAGGGCAA
CTTTGTCCAGATCCACGTCTCCTACGTGCCGGTCATCCCGCCGGGACCTG
GTGGTGAGCAGAAGACGAAACCCACGCAGAGGGCAATCAGCGATGTGCGG
AGTGCTGGTCTCAACCCCGACCTGATTGCTTGTCGCTGCGAGCAACCTCT
GGAAGATAGCACCATCCAGAAGATCGCCAATATGTGCTCCGTCGAGCAGC
ACCAGGTCATTGCCGTTCACAACGTCACGACGACATACCACGTGCCTATG
CTCCTCGAGAAGCAGAAGCTTATCAGCACCATCACCGATATGCTCGACTT
GAAGTCGATCCCGCAGACCCCTGAGCGCAAGGAGCAGGGTAGCCGCATGT
GGAACGACTGGTGCGATCTTGCTCGTGGCCAGGACTTCCTCCACGATTCC
GTCTCCATTGCCCTGGTTGGCAAATACACTTCCCTTCACGATGCCTACAT
CAGTGTCTCCAAGGCTCTGGAGCACGCGGCCATGTACTGCCACAAAAAGG
TTCAGATCATCTGGGTCGACTCGTCGCATCTGGAAGATGACACCGCCTCC
CCGGCCGATTACCACAAGGCCTGGCACGCGGTCTGCACGGCCGACGGTGT
CCTGGTGCCCGGTGGTTTCGGTAACAGAGGTACTGAGGGTATGATGAAGG
CCATCACATGGGCGCGTACCAACAACAAGCCGTTCCTGGGTGTCTGCCTG
GGTATGCAGCTGGCCGTGCTGGAGTTCTGCCGCAACGTCGCCAACATTAA
GGATGTCGGCAGTGAGGAGCTGCACCCGAAGGCCGAGAACCACGCCATTG
TCTACATGCCCGAGGTCGACAAGGGCAAGCTCGGTGGAACCATGCGTCTT
GGCAGACACCCCTGCGTCTTCCAGGAGAACACCGAGTGGTCTCGTCTGCG
GAGTCTGTACGGACCCTCCGTCTCGCAGATTGAGGAGCGCCACCGCCATC
GCTACGAGGTCAACCCTGAGATGATCGAGCAGATCGAGAAGGCCGGTCTC
TCCTTCATTGGAAAGGACATCAAGGGTGAGCGTATGGAGATTGTCGAGAT
CAAGGACCACCCCTGGTTCGTGGGTGTGCAGTTCCACCCCGAGTACCTCA
GTCGGGTCTTGAGCCCCAGCCGGGCTTTCCTCGGTTTCTTTGCCGCCGCT
GCGGGATGCCTCGATGAGGTCTCCAAGGCAGTTGTGCAGGGTCAGCGGAG
CATTGGCCGCAAGCAATAGGTGTCATCTCCGGCGTGGGCAAGGGCATCAT
TGCCTCCAGCACCGGTCTCCTGCTCAAGACCACCGGTCTGGCCGTCACCA
GTATCAAGATCGACCCTTACATCAACATCGATGCGGGCACAATGGCACCT
ACTGAATGAAATACGTTCTGGTTTCCGGAGGCACGGTGAGGTCTATGTCA
CAGACGACGGCGGTGAAATGGACCTCGACCTTGGCAACTACGAGCGCTAC
CTCCTCTCCTCTCTCTCCCGCGATCACAACATCACCACCGGAAAGGTCTA
CCAGCACGTCATCAACCGCGAGCGCATTGGCCATTATCTCGGTAAGACCG
TGCAGGTCGTGCCCCACGTCACCGATGCCATTCAGGAGTGGATTCAGCGG
GTAGCCAAGATCCCCGTCGACGAGTCCAAGGCCGAGCCGGATGTCTGCAT
CATCGAGCTGGGTGGTACCGTCGGTGACATTGAGAGTGCCCCGTTCATCC
ACGCTCTGAGCCAGCTCCAGAGAAAGGCGGGCAAGGGCAACTTTGTCCAG
ATCCACGTCTCCTACGTGCCGGTCATCCCGCCGGGACCTGGTGGTGAGCA
GAAGACGAAACCCACGCAGAGGGCAATCAGCGATGTGCGGAGTGCTGGTC
TCAACCCCGACCTGATTGCTTGTCGCTGCGAGCAACCTCTGGAAGATAGC
ACCATCCAGAAGATCGCCAATATGTGCTCCGTCGAGCAGCACCAGGTCAT
TGCCGTTCACAACGTCACGACGACATACCACGTGCCTATGCTCCTCGAGA
AGCAGAAGCTTATCAGCACCATCACCGATATGCTCGACTTGAAGTCGATC
CCGCAGACCCCTGAGCGCAAGGAGCAGGGTAGCCGCATGTGGAACGACTG
GTGCGATCTTGCTCGTGGCCAGGACTTCCTCCACGATTCCGTCTCCATTG
CCCTGGTTGGCAAATACACTTCCCTTCACGATGCCTACATCAGTGTCTCC
AAGGCTCTGGAGCACGCGGCCATGTACTGCCACAAAAAGGTTCAGATCAT
CTGGGTCGACTCGTCGCATCTGGAAGATGACACCGCCTCCCCGGCCGATT
ACCACAAGGCCTGGCACGCGGTCTGCACGGCCGACGGTGTCCTGGTGCCC
GGTGGTTTCGGTAACAGAGGTACTGAGGGTATGATGAAGGCCATCACATG
GGCGCGTACCAACAACAAGCCGTTCCTGGGTGTCTGCCTGGGTATGCAGC
TGGCCGTGCTGGAGTTCTGCCGCAACGTCGCCAACATTAAGGATGTCGGC
AGTGAGGAGCTGCACCCGAAGGCCGAGAACCACGCCATTGTCTACATGCC
CGAGGTCGACAAGGGCAAGCTCGGTGGAACCATGCGTCTTGGCAGACACC
CCTGCGTCTTCCAGGAGAACACCGAGTGGTCTCGTCTGCGGAGTCTGTAC
GGACCCTCCGTCTCGCAGATTGAGGAGCGCCACCGCCATCGCTACGAGGT
CAACCCTGAGATGATCGAGCAGATCGAGAAGGCCGGTCTCTCCTTCATTG
GAAAGGACATCAAGGGTGAGCGTATGGAGATTGTCGAGATCAAGGACCAC
CCCTGGTTCGTGGGTGTGCAGTTCCACCCCGAGTACCTCAGTCGGGTCTT
GAGCCCCAGCCGGGCTTTCCTCGGTTTCTTTGCCGCCGCTGCGGGATGCC
TCGATGAGGTCTCCAAGGCAGTTGTGCAGGGTCAGCGGAGCATTGGCCGC
AAGCAATAGGTGTCATCTCCGGCGTGGGCAAGGGCATCATTGCCTCCAGC
ACCGGTCTCCTGCTCAAGACCACCGGTCTGGCCGTCACCAGTATCAAGAT
CGACCCTTACATCAACATCGATGCGGGCACAATGGCACCTACTGAATGAA
ATACGTTCTGGTTTCCGGAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006241 | CTP biosynthetic process |
| GO:0006221 | pyrimidine nucleotide biosynthetic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003883 | CTP synthase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007865-T1.utr3p1 | KJC3_007865-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007865-T1.utr5p1 | KJC3_007865-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092620EL |
| Note | MEROPS:MER0437468 |
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR033828 |
| DBxref | InterPro:IPR004468 |
| DBxref | InterPro:IPR017456 |
| DBxref | InterPro:IPR029062 |
| DBxref | InterPro:IPR017926 |
| DBxref | PFAM:PF07722 |
| DBxref | PFAM:PF00117 |
| DBxref | PFAM:PF06418 |
| Product | CTP synthase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:308781..311319 - |
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