|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:533626..535931+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_007958-T2 ID=KJC3_007958-T2|Name=KJC3_007958-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2306bp|location=Sequence derived from alignment at ch6:533626..535931+ (Aspergillus niger KJC3)
CTCACCCTCCTCCCTGCGACACCAACCCATGATGCCGTCTGCGGTGCAAG
CCGGGGACTTCTCCTGGAGTAGCGTACTGATCTCATCCGCCCTATTATAA
TTTCTCACAGTCTAACCCGCTCCTACCAGACTGCGCCAGGCTCAGCACTA
AATTTCATCCCCTGCTACCAGGACTATCTATGTGCACGTCTCGAAGTTCC
CCTAGACTGGTCAGCTAGTGCCATTGAAAATAAAACGGCTGCCCTGGCCG
TCATAAAACTGCCTGCACAGGTAGATCCTGCCGACGAGCGTTACGGTGGC
TCCATAATCGTGAACCCAGGTATAGGCAGCAATGCCACCACCGCCACCAT
TCTGTCACCCCACCACGGTCGCTTACTAGGAATACAGGTGGCCCTGGCGG
GTCCGGCGTGCAGGAAATACTTAACCGAGGGAAAGAAATCCAGCGGACTG
TAGACAGCCCCGATGATGCACAGCAATCTCGCTATTTCGACATTGTGTCC
TTTGACCCCCGAGGCGTGGGAAATACCATTCCTCCCTTAACCTGTTTTCC
TGATCTGCTGTCTAGTTACCTCTGGAATGAGGCTGTGCAAGCTCATGGCT
TGGTAGGTAGCTCCGAACACGCAGCGGATCTTCTTTGGGCCCGCATGCAG
GCCCTAGCCACATCGTGTACAGATTCCTCTAAGGACAATGCGGATATTGG
CCCGTACATGAATACCTGGAGTACGGCACATGATCTGCGACATATTGCTC
AACTGCTCCAACCGGATCCACGCGCAGATGCAAAGCTGCAATACTGGGGT
TACTCATACGGGACTCTGCTAGGCGTTACTTATGCAAGTCTCTTCCCGAA
CCAAGTTCAGCGGATGGTGTTAGACGGGGTGGTAGATGCATTAAGCTGGT
ACTCTGGCGAGATGTCGACATCATTGCGTGACGCAGATCGTGTATTTGAC
AGTTTCTTCCGCTATTGTCATCAGGCAGGCCAGCCGAGGTGTGCCTTTGC
CAGCCCATCTGCTGACGGAGAAGACAATATAAACGCAATAAGCGAACTCC
AGCAGCGCTTCACGAATATACTGTCTGATCTGAAAGCGTCCCCCCTCTGG
ACCACTCATCCAAACCCAGACATAATCACCTATTCCGACGTGAGACGTCT
CCTAAGACTTGCCTTGTACGCGCCGATCGACCTTTTCCCCACTCTCGCTA
TCATCCTAGCAGATCTCGAACAACGGAACGCAACGAGCATGGCTGAATGG
AAAACCATGCTACGCGAGGAAATGCAGCCAGCTCACTGCCTTAGCTCAGA
ATGTCAGTCTGATGCTCCGTGTCGTGAGGCATGCCAATACTCGTACCGCG
TAGAAGTGACTGCTGGTACCGTATGTTTGGACCTAAATCAGAAGCTACTG
AATGCCACCCGCGAGGAATACTGGGATGAGTATCTTCGGCCTTCCATTGA
GAGCAGCCATTGGATGGGGGACACGTTTGCAGATTTCTTAATGCCGTGTG
CTAGATGGAATGGTCGAGGACCAGGGGATTTCAAAGGTTCGTTCTTGTAT
CACTGCAACTAGCTGCTGCCCAAGTGCTTAACTTGAAGAAGGACCTACAG
GGGCTCAGGATATGTCCACACCTGTACTATTCGTCAGTAATACTCTGGAT
CCAGTGACTCCTCTGGGCGAGTATGTTTCCCATCACCCTGCTATCTCATT
ATATATTTCCATCTACGGCCTATTAACGATAAGATTAGTGCCCATGCTAT
GTCCGCTTTGTTTGAAAAGTCTGTTGTATTAGAGCAGCATGCTGAAGGTG
TAAGTTCATTCCCTATATTTCTGCTTTGCGATCTTGTTCAGTGATAAGTC
TTCTAATTGAACTTCACTGTAGCATTGTTCCTTCGCTTCGCGTTCGGGGT
GTACAGATGATCATATCCGAGCGTACTTTCAGACTGGGGAGCTTCCGGCA
CCAGGCACGCGTTGTGAGACAGATATACGTCCCTTTGGGGTCGAGGACGT
GCTAGATGGAACCTCCCCAGTGGAGCTAGAGAGGACGGAGCTGTGATCTA
GTCTCTCTAGTTTGGTATCCGGATTCAATAATAATAAACGATAATTTTAC
CGATGCCGCTGATATTAGGAATCTGGGAAGGCGCATGTTTCTGTCCCTTG
TGGCGAACTAATATGATGGATGTTGAATTTTATCTCGTTGGAATATTTTT
TCCTATTTCTATTTTATCCTATTTTCATTCTTGAAAATAACGGATTAACA
ACAAATGCCAAAGGGACGAGTACAGGCCACAGTGGTCTCTAGGCAGGTAG
TGCCAC back to topCoding sequence (CDS) from alignment at ch6:533626..535931+ >KJC3_007958-T2 ID=KJC3_007958-T2|Name=KJC3_007958-T2|organism=Aspergillus niger KJC3|type=CDS|length=4230bp|location=Sequence derived from alignment at ch6:533626..535931+ (Aspergillus niger KJC3)
ATGATGCCGTCTGCGGTGCAAGCCGGGGACTTCTCCTGGAGTAGCACTGC
GCCAGGCTCAGCACTAAATTTCATCCCCTGCTACCAGGACTATCTATGTG
CACGTCTCGAAGTTCCCCTAGACTGGTCAGCTAGTGCCATTGAAAATAAA
ACGGCTGCCCTGGCCGTCATAAAACTGCCTGCACAGGTAGATCCTGCCGA
CGAGCGTTACGGTGGCTCCATAATCGTGAACCCAGGTGGCCCTGGCGGGT
CCGGCGTGCAGGAAATACTTAACCGAGGGAAAGAAATCCAGCGGACTGTA
GACAGCCCCGATGATGCACAGCAATCTCGCTATTTCGACATTGTGTCCTT
TGACCCCCGAGGCGTGGGAAATACCATTCCTCCCTTAACCTGTTTTCCTG
ATCTGCTGTCTAGTTACCTCTGGAATGAGGCTGTGCAAGCTCATGGCTTG
GTAGGTAGCTCCGAACACGCAGCGGATCTTCTTTGGGCCCGCATGCAGGC
CCTAGCCACATCGTGTACAGATTCCTCTAAGGACAATGCGGATATTGGCC
CGTACATGAATACCTGGAGTACGGCACATGATCTGCGACATATTGCTCAA
CTGCTCCAACCGGATCCACGCGCAGATGCAAAGCTGCAATACTGGGGTTA
CTCATACGGGACTCTGCTAGGCGTTACTTATGCAAGTCTCTTCCCGAACC
AAGTTCAGCGGATGGTGTTAGACGGGGTGGTAGATGCATTAAGCTGGTAC
TCTGGCGAGATGTCGACATCATTGCGTGACGCAGATCGTGTATTTGACAG
TTTCTTCCGCTATTGTCATCAGGCAGGCCAGCCGAGGTGTGCCTTTGCCA
GCCCATCTGCTGACGGAGAAGACAATATAAACGCAATAAGCGAACTCCAG
CAGCGCTTCACGAATATACTGTCTGATCTGAAAGCGTCCCCCCTCTGGAC
CACTCATCCAAACCCAGACATAATCACCTATTCCGACGTGAGACGTCTCC
TAAGACTTGCCTTGTACGCGCCGATCGACCTTTTCCCCACTCTCGCTATC
ATCCTAGCAGATCTCGAACAACGGAACGCAACGAGCATGGCTGAATGGAA
AACCATGCTACGCGAGGAAATGCAGCCAGCTCACTGCCTTAGCTCAGAAT
GTCAGTCTGATGCTCCGTGTCGTGAGGCATGCCAATACTCGTACCGCGTA
GAAGTGACTGCTGGTACCGTATGTTTGGACCTAAATCAGAAGCTACTGAA
TGCCACCCGCGAGGAATACTGGGATGAGTATCTTCGGCCTTCCATTGAGA
GCAGCCATTGGATGGGGGACACGTTTGCAGATTTCTTAATGCCGTGTGCT
AGATGGAATGGTCGAGGACCAGGGGATTTCAAAGGTTCGTTCTTGTATCA
CTGCAACTAGATGATGCCGTCTGCGGTGCAAGCCGGGGACTTCTCCTGGA
GTAGCACTGCGCCAGGCTCAGCACTAAATTTCATCCCCTGCTACCAGGAC
TATCTATGTGCACGTCTCGAAGTTCCCCTAGACTGGTCAGCTAGTGCCAT
TGAAAATAAAACGGCTGCCCTGGCCGTCATAAAACTGCCTGCACAGGTAG
ATCCTGCCGACGAGCGTTACGGTGGCTCCATAATCGTGAACCCAGGTGGC
CCTGGCGGGTCCGGCGTGCAGGAAATACTTAACCGAGGGAAAGAAATCCA
GCGGACTGTAGACAGCCCCGATGATGCACAGCAATCTCGCTATTTCGACA
TTGTGTCCTTTGACCCCCGAGGCGTGGGAAATACCATTCCTCCCTTAACC
TGTTTTCCTGATCTGCTGTCTAGTTACCTCTGGAATGAGGCTGTGCAAGC
TCATGGCTTGGTAGGTAGCTCCGAACACGCAGCGGATCTTCTTTGGGCCC
GCATGCAGGCCCTAGCCACATCGTGTACAGATTCCTCTAAGGACAATGCG
GATATTGGCCCGTACATGAATACCTGGAGTACGGCACATGATCTGCGACA
TATTGCTCAACTGCTCCAACCGGATCCACGCGCAGATGCAAAGCTGCAAT
ACTGGGGTTACTCATACGGGACTCTGCTAGGCGTTACTTATGCAAGTCTC
TTCCCGAACCAAGTTCAGCGGATGGTGTTAGACGGGGTGGTAGATGCATT
AAGCTGGTACTCTGGCGAGATGTCGACATCATTGCGTGACGCAGATCGTG
TATTTGACAGTTTCTTCCGCTATTGTCATCAGGCAGGCCAGCCGAGGTGT
GCCTTTGCCAGCCCATCTGCTGACGGAGAAGACAATATAAACGCAATAAG
CGAACTCCAGCAGCGCTTCACGAATATACTGTCTGATCTGAAAGCGTCCC
CCCTCTGGACCACTCATCCAAACCCAGACATAATCACCTATTCCGACGTG
AGACGTCTCCTAAGACTTGCCTTGTACGCGCCGATCGACCTTTTCCCCAC
TCTCGCTATCATCCTAGCAGATCTCGAACAACGGAACGCAACGAGCATGG
CTGAATGGAAAACCATGCTACGCGAGGAAATGCAGCCAGCTCACTGCCTT
AGCTCAGAATGTCAGTCTGATGCTCCGTGTCGTGAGGCATGCCAATACTC
GTACCGCGTAGAAGTGACTGCTGGTACCGTATGTTTGGACCTAAATCAGA
AGCTACTGAATGCCACCCGCGAGGAATACTGGGATGAGTATCTTCGGCCT
TCCATTGAGAGCAGCCATTGGATGGGGGACACGTTTGCAGATTTCTTAAT
GCCGTGTGCTAGATGGAATGGTCGAGGACCAGGGGATTTCAAAGGTTCGT
TCTTGTATCACTGCAACTAGATGATGCCGTCTGCGGTGCAAGCCGGGGAC
TTCTCCTGGAGTAGCACTGCGCCAGGCTCAGCACTAAATTTCATCCCCTG
CTACCAGGACTATCTATGTGCACGTCTCGAAGTTCCCCTAGACTGGTCAG
CTAGTGCCATTGAAAATAAAACGGCTGCCCTGGCCGTCATAAAACTGCCT
GCACAGGTAGATCCTGCCGACGAGCGTTACGGTGGCTCCATAATCGTGAA
CCCAGGTGGCCCTGGCGGGTCCGGCGTGCAGGAAATACTTAACCGAGGGA
AAGAAATCCAGCGGACTGTAGACAGCCCCGATGATGCACAGCAATCTCGC
TATTTCGACATTGTGTCCTTTGACCCCCGAGGCGTGGGAAATACCATTCC
TCCCTTAACCTGTTTTCCTGATCTGCTGTCTAGTTACCTCTGGAATGAGG
CTGTGCAAGCTCATGGCTTGGTAGGTAGCTCCGAACACGCAGCGGATCTT
CTTTGGGCCCGCATGCAGGCCCTAGCCACATCGTGTACAGATTCCTCTAA
GGACAATGCGGATATTGGCCCGTACATGAATACCTGGAGTACGGCACATG
ATCTGCGACATATTGCTCAACTGCTCCAACCGGATCCACGCGCAGATGCA
AAGCTGCAATACTGGGGTTACTCATACGGGACTCTGCTAGGCGTTACTTA
TGCAAGTCTCTTCCCGAACCAAGTTCAGCGGATGGTGTTAGACGGGGTGG
TAGATGCATTAAGCTGGTACTCTGGCGAGATGTCGACATCATTGCGTGAC
GCAGATCGTGTATTTGACAGTTTCTTCCGCTATTGTCATCAGGCAGGCCA
GCCGAGGTGTGCCTTTGCCAGCCCATCTGCTGACGGAGAAGACAATATAA
ACGCAATAAGCGAACTCCAGCAGCGCTTCACGAATATACTGTCTGATCTG
AAAGCGTCCCCCCTCTGGACCACTCATCCAAACCCAGACATAATCACCTA
TTCCGACGTGAGACGTCTCCTAAGACTTGCCTTGTACGCGCCGATCGACC
TTTTCCCCACTCTCGCTATCATCCTAGCAGATCTCGAACAACGGAACGCA
ACGAGCATGGCTGAATGGAAAACCATGCTACGCGAGGAAATGCAGCCAGC
TCACTGCCTTAGCTCAGAATGTCAGTCTGATGCTCCGTGTCGTGAGGCAT
GCCAATACTCGTACCGCGTAGAAGTGACTGCTGGTACCGTATGTTTGGAC
CTAAATCAGAAGCTACTGAATGCCACCCGCGAGGAATACTGGGATGAGTA
TCTTCGGCCTTCCATTGAGAGCAGCCATTGGATGGGGGACACGTTTGCAG
ATTTCTTAATGCCGTGTGCTAGATGGAATGGTCGAGGACCAGGGGATTTC
AAAGGTTCGTTCTTGTATCACTGCAACTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007958-T2.utr5p1 | KJC3_007958-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_007958-T2.utr3p1 | KJC3_007958-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | MEROPS:MER0004231 |
| DBxref | InterPro:IPR029058 |
| DBxref | InterPro:IPR000073 |
| DBxref | PFAM:PF00561 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:533626..535931 + |
|
