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KJC3_008548-T1, KJC3_008548-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008548-T1
Unique NameKJC3_008548-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:2357240..2358657-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008548-T1 ID=KJC3_008548-T1|Name=KJC3_008548-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1418bp|location=Sequence derived from alignment at ch6:2357240..2358657- (Aspergillus niger KJC3)
ATGGTTATGGCACCGACTGCTTGTGTACCTGCTGAAGTATGCACTCCTAA
ATACTACCAGGAGAAACACGACTATAATCTCAATTGGGATCATGGTCAAT
TCAGCAATCATGGAGGGGACGATTTATCGCAATCTAGGTTGGCTGCCAAG
GAACTAGTCTTGGACATCCTGAAGAAGCGCGCAGCTGAGGTCAATGTGGA
CAGCTGCGCGCCAGGAGAGGAGGACCCGTTTTACGTGGCAGATATGGGGG
AGGTCTACCGCCAGCATCTGCGCTGGAAAATGAACTTGAGCCGTGTTCGG
CCTTTCTACGGTAAGGATATGAATGCACAACTGGGATTTTCATGACAGCG
GCTAACAGTGAGTCAATAGCGGTCAAGTGCAACCCCGACCCGGAGATCCT
TCGCCTCATGGCTAAACTCGGAAACGGTTTTGATTGTGCGTCCAAGGCCG
AGATCGATATGGCCCTCGAGACCGGCGTCGACCCAAGCCGCATCATCTAC
GCGCAGCCCTGCAAGACCAAGTCCTATCTGCGCTACGCCGCCCAGGTGGG
CGTCAAGCAGATGACCTTTGACAACGCCGACGAGCTGTACAAGATCAAGG
CCAACTACCCGGACGCCGAGCTTTATCTGCGCATCCTCACGGATGATTCG
AACAGCTTGTGCCAGTTCAGCATGAAATTCGGAGCTTCCTTGGACGTTGC
TCGCCAGCTCCTCGAATTGGCGCACCAGCTCGAGCTGAAGGTGGTCGGCG
TGAGTTTTCACGTCGGATCAGGCGCTGAGGATCCTAAGGCTTTCCTGAAA
GCCGTGCAGGACGCGCGCCTTGTGTTTGATCAAGCCGCAGAGATTGGCCA
CGAACTGCACACTTTGGATGTCGGCGGAGGTTTCTCCCAGGACACTTTTG
AGAAATTCGCCGGCGTCCTGAGCGAGGCGTTGGAGACCTATTTCCCGCCC
AACATCCGGGTCATTGCCGAACCGGGTCGCTACTATGTTGCCAATGCGTT
CACTCTGGCGGCCAACATCATTGCTCGCCGTGAGGTGCGCGACCCGGAGG
ACCCGGCCAACGACGCCTACATGCTGTATCTCAACGACGGGGTGTATGGA
AACTTCTCCAACATCATCTTTGACCACCAGCACCCCGTGGCCCAGGTCCT
GACCTGTGCGTCGGCCGCTAACTCCCCTTATGCTGCGACTTCGGGGGGTG
TCACGTACTCCATCTGGGGGCCGACCTGTGACGGCATTGATGTTATCTCC
AAGCGCATTGCGCTGCCAGCTCTGCTGGAAGTTGGAGATTGGCTTTACTT
CGAGGAGATGGGAGCCTACACCAAGTGTAGCGCGACCCGCTTCAACGGCT
TTTCGGACAACCACGAGGTGATCTACATCTCCAGCGAAGCCGGGGCTTCT
GCGCTCCTCGAGTATTAG
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Coding sequence (CDS) from alignment at ch6:2357240..2358657-

>KJC3_008548-T1 ID=KJC3_008548-T1|Name=KJC3_008548-T1|organism=Aspergillus niger KJC3|type=CDS|length=2718bp|location=Sequence derived from alignment at ch6:2357240..2358657- (Aspergillus niger KJC3)
CGGTCAAGTGCAACCCCGACCCGGAGATCCTTCGCCTCATGGCTAAACTC
GGAAACGGTTTTGATTGTGCGTCCAAGGCCGAGATCGATATGGCCCTCGA
GACCGGCGTCGACCCAAGCCGCATCATCTACGCGCAGCCCTGCAAGACCA
AGTCCTATCTGCGCTACGCCGCCCAGGTGGGCGTCAAGCAGATGACCTTT
GACAACGCCGACGAGCTGTACAAGATCAAGGCCAACTACCCGGACGCCGA
GCTTTATCTGCGCATCCTCACGGATGATTCGAACAGCTTGTGCCAGTTCA
GCATGAAATTCGGAGCTTCCTTGGACGTTGCTCGCCAGCTCCTCGAATTG
GCGCACCAGCTCGAGCTGAAGGTGGTCGGCGTGAGTTTTCACGTCGGATC
AGGCGCTGAGGATCCTAAGGCTTTCCTGAAAGCCGTGCAGGACGCGCGCC
TTGTGTTTGATCAAGCCGCAGAGATTGGCCACGAACTGCACACTTTGGAT
GTCGGCGGAGGTTTCTCCCAGGACACTTTTGAGAAATTCGCCGGCGTCCT
GAGCGAGGCGTTGGAGACCTATTTCCCGCCCAACATCCGGGTCATTGCCG
AACCGGGTCGCTACTATGTTGCCAATGCGTTCACTCTGGCGGCCAACATC
ATTGCTCGCCGTGAGGTGCGCGACCCGGAGGACCCGGCCAACGACGCCTA
CATGCTGTATCTCAACGACGGGGTGTATGGAAACTTCTCCAACATCATCT
TTGACCACCAGCACCCCGTGGCCCAGGTCCTGACCTGTGCGTCGGCCGCT
AACTCCCCTTATGCTGCGACTTCGGGGGGTGTCACGTACTCCATCTGGGG
GCCGACCTGTGACGGCATTGATGTTATCTCCAAGCGCATTGCGCTGCCAG
CTCTGCTGGAAGTTGGAGATTGGCTTTACTTCGAGGAGATGGGAGCCTAC
ACCAAGTGTAGCGCGACCCGCTTCAACGGCTTTTCGGACAACCACGAGGT
GATCTACATCTCCAGCGAAGCCGGGGCTTCTGCGCTCCTCGAGTATTAGA
TGGTTATGGCACCGACTGCTTGTGTACCTGCTGAAGTATGCACTCCTAAA
TACTACCAGGAGAAACACGACTATAATCTCAATTGGGATCATGGTCAATT
CAGCAATCATGGAGGGGACGATTTATCGCAATCTAGGTTGGCTGCCAAGG
AACTAGTCTTGGACATCCTGAAGAAGCGCGCAGCTGAGGTCAATGTGGAC
AGCTGCGCGCCAGGAGAGGAGGACCCGTTTTACGTGGCAGATATGGGGGA
GGTCTACCGCCAGCATCTGCGCTGGAAAATGAACTTGAGCCGTGTTCGGC
CTTTCTACGCGGTCAAGTGCAACCCCGACCCGGAGATCCTTCGCCTCATG
GCTAAACTCGGAAACGGTTTTGATTGTGCGTCCAAGGCCGAGATCGATAT
GGCCCTCGAGACCGGCGTCGACCCAAGCCGCATCATCTACGCGCAGCCCT
GCAAGACCAAGTCCTATCTGCGCTACGCCGCCCAGGTGGGCGTCAAGCAG
ATGACCTTTGACAACGCCGACGAGCTGTACAAGATCAAGGCCAACTACCC
GGACGCCGAGCTTTATCTGCGCATCCTCACGGATGATTCGAACAGCTTGT
GCCAGTTCAGCATGAAATTCGGAGCTTCCTTGGACGTTGCTCGCCAGCTC
CTCGAATTGGCGCACCAGCTCGAGCTGAAGGTGGTCGGCGTGAGTTTTCA
CGTCGGATCAGGCGCTGAGGATCCTAAGGCTTTCCTGAAAGCCGTGCAGG
ACGCGCGCCTTGTGTTTGATCAAGCCGCAGAGATTGGCCACGAACTGCAC
ACTTTGGATGTCGGCGGAGGTTTCTCCCAGGACACTTTTGAGAAATTCGC
CGGCGTCCTGAGCGAGGCGTTGGAGACCTATTTCCCGCCCAACATCCGGG
TCATTGCCGAACCGGGTCGCTACTATGTTGCCAATGCGTTCACTCTGGCG
GCCAACATCATTGCTCGCCGTGAGGTGCGCGACCCGGAGGACCCGGCCAA
CGACGCCTACATGCTGTATCTCAACGACGGGGTGTATGGAAACTTCTCCA
ACATCATCTTTGACCACCAGCACCCCGTGGCCCAGGTCCTGACCTGTGCG
TCGGCCGCTAACTCCCCTTATGCTGCGACTTCGGGGGGTGTCACGTACTC
CATCTGGGGGCCGACCTGTGACGGCATTGATGTTATCTCCAAGCGCATTG
CGCTGCCAGCTCTGCTGGAAGTTGGAGATTGGCTTTACTTCGAGGAGATG
GGAGCCTACACCAAGTGTAGCGCGACCCGCTTCAACGGCTTTTCGGACAA
CCACGAGGTGATCTACATCTCCAGCGAAGCCGGGGCTTCTGCGCTCCTCG
AGTATTAGATGGTTATGGCACCGACTGCTTGTGTACCTGCTGAAGTATGC
ACTCCTAAATACTACCAGGAGAAACACGACTATAATCTCAATTGGGATCA
TGGTCAATTCAGCAATCATGGAGGGGACGATTTATCGCAATCTAGGTTGG
CTGCCAAGGAACTAGTCTTGGACATCCTGAAGAAGCGCGCAGCTGAGGTC
AATGTGGACAGCTGCGCGCCAGGAGAGGAGGACCCGTTTTACGTGGCAGA
TATGGGGGAGGTCTACCGCCAGCATCTGCGCTGGAAAATGAACTTGAGCC
GTGTTCGGCCTTTCTACG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006596polyamine biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SPE1KJC3_008548Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008548-T1KJC3_008548-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008548-T1.cdsKJC3_008548-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008548-T1.exon2KJC3_008548-T1.exon2Aspergillus niger KJC3exon
KJC3_008548-T1.exon1KJC3_008548-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
NoteBUSCO:EOG09261V03
DBxrefInterPro:IPR022653
DBxrefInterPro:IPR022657
DBxrefInterPro:IPR029066
DBxrefInterPro:IPR022644
DBxrefInterPro:IPR009006
DBxrefInterPro:IPR022643
DBxrefInterPro:IPR002433
DBxrefInterPro:IPR000183
DBxrefPFAM:PF00278
DBxrefPFAM:PF02784
ProductOrnithine decarboxylase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:2357240..2358657 -
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