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KJC3_008848-T1, KJC3_008848-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_008848-T1
Unique NameKJC3_008848-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch6:3238919..3240292-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_008848-T1 ID=KJC3_008848-T1|Name=KJC3_008848-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1374bp|location=Sequence derived from alignment at ch6:3238919..3240292- (Aspergillus niger KJC3)
CTCCATCAACCTTCCACTTTTCCATCATATTCCTTTTCGTTCAGCGACGA
CACAACCATTAGATCCATGACCTTTCAGCTCCTCGTTACTCCTACTGCAG
TATAGAGCATCCTCTTCATCAAACACATCACATTCTCCCAACATGTCGCT
TTGCAAAGCTACCATGCCCTCGCCGGTGACATCATCCGCCACGATCCTCA
CCTGGCTCAGACAGTCCTCCTCCAGACGCTCGACGCAGACTTGCCGTCTA
TTCTCCTCATACGGCAATGCTCACCGGTCTTCGAAGCGTGAATTGCAAAC
TGCCACTGCCTACCGTCCTCACTCGCTGCCCACCTCCTTCCCGCCGCCCC
GGAACACGGGCAACCCTGACACTTCCATCGCTGCCGACTTCCCTTCTTTC
CGTGAAATTTCTCAGCCCCAGATGCCCGGCCAGCAAGGCCTGTCCGACCT
AAGCCTCCGGGAAAGCGAGGCCCAGAAGTCCAAGCCCGTGCCTGCTCCTG
CTCCCGCCGAGAAGACCGCCGCCAAGCCCACTGAGAAGCCTCGGCGCAAG
CTGCGTGCCAGGAAGGCCGCGATGAAGCTGACCCCCGTGGCAATTGAGCA
GCTTCGCAAACTCCTCTCACAGCCGAATCCCAAGCTGATTCGAGTCGGTG
TGAAGAACCGTGGCTGCTCCGGTCTCGCGTACCACCTGGAGTACGTGGAG
AAGCCGGGCACTTTCGACGAAGTGGTGGAGCAGGACGGTGTCAAAGTTCT
CATCGACAGCAAGGCATTGTTCAGTATCATCGGTAGCGAGATGGACTGGC
AGGAGGACAAGCTGAGCAGGAGATTCGTTTTCCGCAACCCGAATATTAGT
AAGCTTCCCTTTGTCCGCGGGAAACCCCAGAAACAGTCGCTAACGTAATA
CTTGTGCAGAGGAACAATGTGGATGCGGTGAATCCTTCATGGTCTGATTT
ATGAAACTGAAATTGGGACCTTTTTCTATTTCGAGTTCATAATCATGCGG
ATTCATGGGTTTTCTCGCGTTTGTGCATTGGCCGGCGTTTACTGGTGGCA
GGTTTGGCGGGTTCGGATAATTCCTTCTTTTATTGCTTGATTGCTGGACA
TACATCATTGATTCCCGGGCAAAGAGCCCACTACTGTGCAATATATTTAC
TTTGTCATATGATTTGATGCACTGAAGCAGAAGCATCGAAGCAGACAGCA
TATGTTGAAGATCGGCGACACAAGCCGTGATTCAATATCTATCACCTAAC
ATCATCATTGCTGATCCCGATGTTTCCAGCTCTTGGAGCAGTTTCATACA
ACGTGAAACCACCCCGGGCTTGCATGAGCAGTATGTAGGATGATCATGAA
ATACAACGACAAACTTAATGACCA
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Coding sequence (CDS) from alignment at ch6:3238919..3240292-

>KJC3_008848-T1 ID=KJC3_008848-T1|Name=KJC3_008848-T1|organism=Aspergillus niger KJC3|type=CDS|length=1488bp|location=Sequence derived from alignment at ch6:3238919..3240292- (Aspergillus niger KJC3)
AGGAACAATGTGGATGCGGTGAATCCTTCATGGTCTGAATGTCGCTTTGC
AAAGCTACCATGCCCTCGCCGGTGACATCATCCGCCACGATCCTCACCTG
GCTCAGACAGTCCTCCTCCAGACGCTCGACGCAGACTTGCCGTCTATTCT
CCTCATACGGCAATGCTCACCGGTCTTCGAAGCGTGAATTGCAAACTGCC
ACTGCCTACCGTCCTCACTCGCTGCCCACCTCCTTCCCGCCGCCCCGGAA
CACGGGCAACCCTGACACTTCCATCGCTGCCGACTTCCCTTCTTTCCGTG
AAATTTCTCAGCCCCAGATGCCCGGCCAGCAAGGCCTGTCCGACCTAAGC
CTCCGGGAAAGCGAGGCCCAGAAGTCCAAGCCCGTGCCTGCTCCTGCTCC
CGCCGAGAAGACCGCCGCCAAGCCCACTGAGAAGCCTCGGCGCAAGCTGC
GTGCCAGGAAGGCCGCGATGAAGCTGACCCCCGTGGCAATTGAGCAGCTT
CGCAAACTCCTCTCACAGCCGAATCCCAAGCTGATTCGAGTCGGTGTGAA
GAACCGTGGCTGCTCCGGTCTCGCGTACCACCTGGAGTACGTGGAGAAGC
CGGGCACTTTCGACGAAGTGGTGGAGCAGGACGGTGTCAAAGTTCTCATC
GACAGCAAGGCATTGTTCAGTATCATCGGTAGCGAGATGGACTGGCAGGA
GGACAAGCTGAGCAGGAGATTCGTTTTCCGCAACCCGAATATTAAGGAAC
AATGTGGATGCGGTGAATCCTTCATGGTCTGAATGTCGCTTTGCAAAGCT
ACCATGCCCTCGCCGGTGACATCATCCGCCACGATCCTCACCTGGCTCAG
ACAGTCCTCCTCCAGACGCTCGACGCAGACTTGCCGTCTATTCTCCTCAT
ACGGCAATGCTCACCGGTCTTCGAAGCGTGAATTGCAAACTGCCACTGCC
TACCGTCCTCACTCGCTGCCCACCTCCTTCCCGCCGCCCCGGAACACGGG
CAACCCTGACACTTCCATCGCTGCCGACTTCCCTTCTTTCCGTGAAATTT
CTCAGCCCCAGATGCCCGGCCAGCAAGGCCTGTCCGACCTAAGCCTCCGG
GAAAGCGAGGCCCAGAAGTCCAAGCCCGTGCCTGCTCCTGCTCCCGCCGA
GAAGACCGCCGCCAAGCCCACTGAGAAGCCTCGGCGCAAGCTGCGTGCCA
GGAAGGCCGCGATGAAGCTGACCCCCGTGGCAATTGAGCAGCTTCGCAAA
CTCCTCTCACAGCCGAATCCCAAGCTGATTCGAGTCGGTGTGAAGAACCG
TGGCTGCTCCGGTCTCGCGTACCACCTGGAGTACGTGGAGAAGCCGGGCA
CTTTCGACGAAGTGGTGGAGCAGGACGGTGTCAAAGTTCTCATCGACAGC
AAGGCATTGTTCAGTATCATCGGTAGCGAGATGGACTGGCAGGAGGACAA
GCTGAGCAGGAGATTCGTTTTCCGCAACCCGAATATTA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0097428protein maturation by iron-sulfur cluster transfer
Vocabulary: Molecular Function
TermDefinition
GO:0005198structural molecule activity
GO:0051536iron-sulfur cluster binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_008848KJC3_008848Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008848-T1KJC3_008848-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008848-T1.cdsKJC3_008848-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008848-T1.utr3p1KJC3_008848-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008848-T1.exon2KJC3_008848-T1.exon2Aspergillus niger KJC3exon
KJC3_008848-T1.exon1KJC3_008848-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_008848-T1.utr5p1KJC3_008848-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR017870
DBxrefInterPro:IPR035903
DBxrefInterPro:IPR000361
DBxrefInterPro:IPR016092
DBxrefPFAM:PF01521
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch6supercontigch6:3238919..3240292 -
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