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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:3290991..3293232+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_008868-T1 ID=KJC3_008868-T1|Name=KJC3_008868-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2242bp|location=Sequence derived from alignment at ch6:3290991..3293232+ (Aspergillus niger KJC3) ATGGCTGCAGCCACCAAAATCCGTAAGCCCAACTGTTCTCTCTTGCTTGT
ACTCTGCTGTGCACAACATCCCGGCTCCCATACTTACATTCCCTGCTTGC
TATTTCAGCCGCACGAAGCCTCAATGGTTGCTGGACATGCCGTGTCCGCC
GGAAGAAATGCGATGAGACTCGCCCGGCATGCACCCGATGCATCTCCTTG
GACCTCGAGTGCCACGGATACTGTCCGCGGCCGTATTGGATGGACAATGG
GACCCTGCAAAATGAGCAAGCCTCGAAGTTCCGGCAGATGGTTAGTCAGG
CCCGGTCAAGAAAGAGAAGACAGAAACTTCTTCTTTCTACTCGCCCATCA
GCCCGCAATACCGGTAAGGGTCTCCATCTACAGATGTCAAGCAAAGGACC
CGCACTAAGATCGATCACTCTAGTCTACCCTTTCTTCAATGTAGCCCCAG
ACGAACTGCAAGGTCTAACCCGAGACAGCAATGTGGCTGCTATTAATAAT
AGTACGCTGGTGTACAGCACCGTGCCTCTCCACCAGCTCCCCACCCCTGA
AGGCACCTCGGTCTTCCCTGAGGAAGACTATACCACGTTCTCGAAGCAGT
TAGAGTGGGCGCACAACCCTTCGTCTCCCTCATCGTCAGTAGAAGGAATC
TTAACCCCAAACGTGCTGGAAACGCAAGAGCCCGGAATTGTATGGGGTGA
CATGATGAACTCGGACGATTTTGGCTTGGCCATGAGTAAATCCTCCCTGT
CGGACTTGGATGACTTGATGTGGAGCGCATCCCTGGATAGCCCCCACCTG
CAGAAAGAACCTACTTTGTCTCCTGACCCGACAAGCCTGCAACCGACGTC
CGGCATGCATATGCTGGCAGCTGCAACCTGCGGACAGACCATCTCGTGGC
CCGGGACACCCCTTGACCCCATCCCGGGAAGCAGATCCGAGGATGAGTTA
CTGATGCACTACTTGGACCGGGTCTTCTACATTCAATATCCATTTTACCA
CACCCAAGACCGACAAGGGAGAGGTTGGCTTCTCTCACTTCTGCGGCGCA
TCAAACCCGCATACTATGCCAGTTTGGCTCTCAGTGAGCTCGACTTGCTC
TCGGCATCGCTTCCTAAAAGTGAGCTCCCGGCACGACTGGCGCAATTACG
TACCAAAGATGGCTATCACGACCTGGCTCTTCAGGGAATGCAGCGCATCA
TGGCCGACTCGTTTAGCTGGAATGCACAGAGCCAAATTACGCACAGTCTT
GAGGGACTTGTTTCAATACTTCAACTTTTGTATTGGGAGGTAGGTGGCTC
AACCTGATGATACGGTGTGATTGAAGGTACTGACTTCTTCAGATATTTGC
GGGCGGAACTAAGAACTGGCAATGGCTTCTTCGGCTAGCTGGCAACCTGA
TGCCCGTGTTCATGCAGGTGCGGATGCCTTCTACACCTCATGAAACATCG
AGCCAGATCTGCCCAAGTATACCGCTAGACAATCAGAGCCCGTCCCCCGA
AGACGACTCTACTGCAAGACTCCTCCTTGGGTCTCTCGTGTCGATGGATA
TTATCGCTTCTGCTTCTACCCGGCGGGCTCCCTTTCTGGATATTGATCAT
GTCCAGGTGCTGGACCGCTTCGGGATTTCTCTAGAAAGTCTAATAGGGTG
TCGGAACTCAATCATGGCCCTGATCGCGGATGTTTCTGCGCTGGATCGAT
GGAAGAAAGAGTCTGAGGGGGCCCGTAAGCTCAGCATCATTGAATTAGCA
CAGCGTGGTGGGCAATTGGAGCAGCGCCTACGACGAGAACTCGTCGATCC
CGAGCAGATGTCCGCTTCAGAGCCATTTGCAGCATGGGGCTCTTCCGCTA
CCCCGGGCGTTTCTCGGGCTCACCCAGGAATCAACAAGGCGTTTGGGCTT
GGAGCCATCGCCTATCTCCATGTTGTGCTCTCTGGGGCTCATCCCGAGCT
GCCGGAGATTGCACAAACTGTTTCCGAGGCCATTCTTGTGTTCCAGGTGC
TTCGCGATCAGCGACTCCTGTCGAGTGTGGTGTGGCCTTTTTGCATCGTG
GGCTGTTTAGCGCAGCCCGAACAACAGCCTTCTTTCCGGGAGCTCTTCAC
GACGGCGGAGGCCACGGAGGGAACACTGGCAGAGGCATATCGAGTGATGG
AGGAATGTTGGAAGGCAAGGAAAAGTCGCACATCGGATTGCGACTGGGTT
TCGGTGATGAATGAGCGGGGGGATTATGTGCTGCTTCGATAG back to topCoding sequence (CDS) from alignment at ch6:3290991..3293232+ >KJC3_008868-T1 ID=KJC3_008868-T1|Name=KJC3_008868-T1|organism=Aspergillus niger KJC3|type=CDS|length=8172bp|location=Sequence derived from alignment at ch6:3290991..3293232+ (Aspergillus niger KJC3) ATGGCTGCAGCCACCAAAATCCCCGCACGAAGCCTCAATGGTTGCTGGAC ATGCCGTGTCCGCCGGAAGAAATGCGATGAGACTCGCCCGGCATGCACCC GATGCATCTCCTTGGACCTCGAGTGCCACGGATACTGTCCGCGGCCGTAT TGGATGGACAATGGGACCCTGCAAAATGAGCAAGCCTCGAAGTTCCGGCA GATGGTTAGTCAGGCCCGGTCAAGAAAGAGAAGACAGAAACTTCTTCTTT CTACTCGCCCATCAGCCCGCAATACCGTCTACCCTTTCTTCAATGTAGCC CCAGACGAACTGCAAGGTCTAACCCGAGACAGCAATGTGGCTGCTATTAA TAATAGTACGCTGGTGTACAGCACCGTGCCTCTCCACCAGCTCCCCACCC CTGAAGGCACCTCGGTCTTCCCTGAGGAAGACTATACCACGTTCTCGAAG CAGTTAGAGTGGGCGCACAACCCTTCGTCTCCCTCATCGTCAGTAGAAGG AATCTTAACCCCAAACGTGCTGGAAACGCAAGAGCCCGGAATTGTATGGG GTGACATGATGAACTCGGACGATTTTGGCTTGGCCATGAGTAAATCCTCC CTGTCGGACTTGGATGACTTGATGTGGAGCGCATCCCTGGATAGCCCCCA CCTGCAGAAAGAACCTACTTTGTCTCCTGACCCGACAAGCCTGCAACCGA CGTCCGGCATGCATATGCTGGCAGCTGCAACCTGCGGACAGACCATCTCG TGGCCCGGGACACCCCTTGACCCCATCCCGGGAAGCAGATCCGAGGATGA GTTACTGATGCACTACTTGGACCGGGTCTTCTACATTCAATATCCATTTT ACCACACCCAAGACCGACAAGGGAGAGGTTGGCTTCTCTCACTTCTGCGG CGCATCAAACCCGCATACTATGCCAGTTTGGCTCTCAGTGAGCTCGACTT GCTCTCGGCATCGCTTCCTAAAAGTGAGCTCCCGGCACGACTGGCGCAAT TACGTACCAAAGATGGCTATCACGACCTGGCTCTTCAGGGAATGCAGCGC ATCATGGCCGACTCGTTTAGCTGGAATGCACAGAGCCAAATTACGCACAG TCTTGAGGGACTTGTTTCAATACTTCAACTTTTGTATTGGGAGATATTTG CGGGCGGAACTAAGAACTGGCAATGGCTTCTTCGGCTAGCTGGCAACCTG ATGCCCGTGTTCATGCAGGTGCGGATGCCTTCTACACCTCATGAAACATC GAGCCAGATCTGCCCAAGTATACCGCTAGACAATCAGAGCCCGTCCCCCG AAGACGACTCTACTGCAAGACTCCTCCTTGGGTCTCTCGTGTCGATGGAT ATTATCGCTTCTGCTTCTACCCGGCGGGCTCCCTTTCTGGATATTGATCA TGTCCAGGTGCTGGACCGCTTCGGGATTTCTCTAGAAAGTCTAATAGGGT GTCGGAACTCAATCATGGCCCTGATCGCGGATGTTTCTGCGCTGGATCGA TGGAAGAAAGAGTCTGAGGGGGCCCGTAAGCTCAGCATCATTGAATTAGC ACAGCGTGGTGGGCAATTGGAGCAGCGCCTACGACGAGAACTCGTCGATC CCGAGCAGATGTCCGCTTCAGAGCCATTTGCAGCATGGGGCTCTTCCGCT ACCCCGGGCGTTTCTCGGGCTCACCCAGGAATCAACAAGGCGTTTGGGCT TGGAGCCATCGCCTATCTCCATGTTGTGCTCTCTGGGGCTCATCCCGAGC TGCCGGAGATTGCACAAACTGTTTCCGAGGCCATTCTTGTGTTCCAGGTG CTTCGCGATCAGCGACTCCTGTCGAGTGTGGTGTGGCCTTTTTGCATCGT GGGCTGTTTAGCGCAGCCCGAACAACAGCCTTCTTTCCGGGAGCTCTTCA CGACGGCGGAGGCCACGGAGGGAACACTGGCAGAGGCATATCGAGTGATG GAGGAATGTTGGAAGGCAAGGAAAAGTCGCACATCGGATTGCGACTGGGT TTCGGTGATGAATGAGCGGGGGGATTATGTGCTGCTTCGATAGATGGCTG CAGCCACCAAAATCCCCGCACGAAGCCTCAATGGTTGCTGGACATGCCGT GTCCGCCGGAAGAAATGCGATGAGACTCGCCCGGCATGCACCCGATGCAT CTCCTTGGACCTCGAGTGCCACGGATACTGTCCGCGGCCGTATTGGATGG ACAATGGGACCCTGCAAAATGAGCAAGCCTCGAAGTTCCGGCAGATGGTT AGTCAGGCCCGGTCAAGAAAGAGAAGACAGAAACTTCTTCTTTCTACTCG CCCATCAGCCCGCAATACCGTCTACCCTTTCTTCAATGTAGCCCCAGACG AACTGCAAGGTCTAACCCGAGACAGCAATGTGGCTGCTATTAATAATAGT ACGCTGGTGTACAGCACCGTGCCTCTCCACCAGCTCCCCACCCCTGAAGG CACCTCGGTCTTCCCTGAGGAAGACTATACCACGTTCTCGAAGCAGTTAG AGTGGGCGCACAACCCTTCGTCTCCCTCATCGTCAGTAGAAGGAATCTTA ACCCCAAACGTGCTGGAAACGCAAGAGCCCGGAATTGTATGGGGTGACAT GATGAACTCGGACGATTTTGGCTTGGCCATGAGTAAATCCTCCCTGTCGG ACTTGGATGACTTGATGTGGAGCGCATCCCTGGATAGCCCCCACCTGCAG AAAGAACCTACTTTGTCTCCTGACCCGACAAGCCTGCAACCGACGTCCGG CATGCATATGCTGGCAGCTGCAACCTGCGGACAGACCATCTCGTGGCCCG GGACACCCCTTGACCCCATCCCGGGAAGCAGATCCGAGGATGAGTTACTG ATGCACTACTTGGACCGGGTCTTCTACATTCAATATCCATTTTACCACAC CCAAGACCGACAAGGGAGAGGTTGGCTTCTCTCACTTCTGCGGCGCATCA AACCCGCATACTATGCCAGTTTGGCTCTCAGTGAGCTCGACTTGCTCTCG GCATCGCTTCCTAAAAGTGAGCTCCCGGCACGACTGGCGCAATTACGTAC CAAAGATGGCTATCACGACCTGGCTCTTCAGGGAATGCAGCGCATCATGG CCGACTCGTTTAGCTGGAATGCACAGAGCCAAATTACGCACAGTCTTGAG GGACTTGTTTCAATACTTCAACTTTTGTATTGGGAGATATTTGCGGGCGG AACTAAGAACTGGCAATGGCTTCTTCGGCTAGCTGGCAACCTGATGCCCG TGTTCATGCAGGTGCGGATGCCTTCTACACCTCATGAAACATCGAGCCAG ATCTGCCCAAGTATACCGCTAGACAATCAGAGCCCGTCCCCCGAAGACGA CTCTACTGCAAGACTCCTCCTTGGGTCTCTCGTGTCGATGGATATTATCG CTTCTGCTTCTACCCGGCGGGCTCCCTTTCTGGATATTGATCATGTCCAG GTGCTGGACCGCTTCGGGATTTCTCTAGAAAGTCTAATAGGGTGTCGGAA CTCAATCATGGCCCTGATCGCGGATGTTTCTGCGCTGGATCGATGGAAGA AAGAGTCTGAGGGGGCCCGTAAGCTCAGCATCATTGAATTAGCACAGCGT GGTGGGCAATTGGAGCAGCGCCTACGACGAGAACTCGTCGATCCCGAGCA GATGTCCGCTTCAGAGCCATTTGCAGCATGGGGCTCTTCCGCTACCCCGG GCGTTTCTCGGGCTCACCCAGGAATCAACAAGGCGTTTGGGCTTGGAGCC ATCGCCTATCTCCATGTTGTGCTCTCTGGGGCTCATCCCGAGCTGCCGGA GATTGCACAAACTGTTTCCGAGGCCATTCTTGTGTTCCAGGTGCTTCGCG ATCAGCGACTCCTGTCGAGTGTGGTGTGGCCTTTTTGCATCGTGGGCTGT TTAGCGCAGCCCGAACAACAGCCTTCTTTCCGGGAGCTCTTCACGACGGC GGAGGCCACGGAGGGAACACTGGCAGAGGCATATCGAGTGATGGAGGAAT GTTGGAAGGCAAGGAAAAGTCGCACATCGGATTGCGACTGGGTTTCGGTG ATGAATGAGCGGGGGGATTATGTGCTGCTTCGATAGATGGCTGCAGCCAC CAAAATCCCCGCACGAAGCCTCAATGGTTGCTGGACATGCCGTGTCCGCC GGAAGAAATGCGATGAGACTCGCCCGGCATGCACCCGATGCATCTCCTTG GACCTCGAGTGCCACGGATACTGTCCGCGGCCGTATTGGATGGACAATGG GACCCTGCAAAATGAGCAAGCCTCGAAGTTCCGGCAGATGGTTAGTCAGG CCCGGTCAAGAAAGAGAAGACAGAAACTTCTTCTTTCTACTCGCCCATCA GCCCGCAATACCGTCTACCCTTTCTTCAATGTAGCCCCAGACGAACTGCA AGGTCTAACCCGAGACAGCAATGTGGCTGCTATTAATAATAGTACGCTGG TGTACAGCACCGTGCCTCTCCACCAGCTCCCCACCCCTGAAGGCACCTCG GTCTTCCCTGAGGAAGACTATACCACGTTCTCGAAGCAGTTAGAGTGGGC GCACAACCCTTCGTCTCCCTCATCGTCAGTAGAAGGAATCTTAACCCCAA ACGTGCTGGAAACGCAAGAGCCCGGAATTGTATGGGGTGACATGATGAAC TCGGACGATTTTGGCTTGGCCATGAGTAAATCCTCCCTGTCGGACTTGGA TGACTTGATGTGGAGCGCATCCCTGGATAGCCCCCACCTGCAGAAAGAAC CTACTTTGTCTCCTGACCCGACAAGCCTGCAACCGACGTCCGGCATGCAT ATGCTGGCAGCTGCAACCTGCGGACAGACCATCTCGTGGCCCGGGACACC CCTTGACCCCATCCCGGGAAGCAGATCCGAGGATGAGTTACTGATGCACT ACTTGGACCGGGTCTTCTACATTCAATATCCATTTTACCACACCCAAGAC CGACAAGGGAGAGGTTGGCTTCTCTCACTTCTGCGGCGCATCAAACCCGC ATACTATGCCAGTTTGGCTCTCAGTGAGCTCGACTTGCTCTCGGCATCGC TTCCTAAAAGTGAGCTCCCGGCACGACTGGCGCAATTACGTACCAAAGAT GGCTATCACGACCTGGCTCTTCAGGGAATGCAGCGCATCATGGCCGACTC GTTTAGCTGGAATGCACAGAGCCAAATTACGCACAGTCTTGAGGGACTTG TTTCAATACTTCAACTTTTGTATTGGGAGATATTTGCGGGCGGAACTAAG AACTGGCAATGGCTTCTTCGGCTAGCTGGCAACCTGATGCCCGTGTTCAT GCAGGTGCGGATGCCTTCTACACCTCATGAAACATCGAGCCAGATCTGCC CAAGTATACCGCTAGACAATCAGAGCCCGTCCCCCGAAGACGACTCTACT GCAAGACTCCTCCTTGGGTCTCTCGTGTCGATGGATATTATCGCTTCTGC TTCTACCCGGCGGGCTCCCTTTCTGGATATTGATCATGTCCAGGTGCTGG ACCGCTTCGGGATTTCTCTAGAAAGTCTAATAGGGTGTCGGAACTCAATC ATGGCCCTGATCGCGGATGTTTCTGCGCTGGATCGATGGAAGAAAGAGTC TGAGGGGGCCCGTAAGCTCAGCATCATTGAATTAGCACAGCGTGGTGGGC AATTGGAGCAGCGCCTACGACGAGAACTCGTCGATCCCGAGCAGATGTCC GCTTCAGAGCCATTTGCAGCATGGGGCTCTTCCGCTACCCCGGGCGTTTC TCGGGCTCACCCAGGAATCAACAAGGCGTTTGGGCTTGGAGCCATCGCCT ATCTCCATGTTGTGCTCTCTGGGGCTCATCCCGAGCTGCCGGAGATTGCA CAAACTGTTTCCGAGGCCATTCTTGTGTTCCAGGTGCTTCGCGATCAGCG ACTCCTGTCGAGTGTGGTGTGGCCTTTTTGCATCGTGGGCTGTTTAGCGC AGCCCGAACAACAGCCTTCTTTCCGGGAGCTCTTCACGACGGCGGAGGCC ACGGAGGGAACACTGGCAGAGGCATATCGAGTGATGGAGGAATGTTGGAA GGCAAGGAAAAGTCGCACATCGGATTGCGACTGGGTTTCGGTGATGAATG AGCGGGGGGATTATGTGCTGCTTCGATAGATGGCTGCAGCCACCAAAATC CCCGCACGAAGCCTCAATGGTTGCTGGACATGCCGTGTCCGCCGGAAGAA ATGCGATGAGACTCGCCCGGCATGCACCCGATGCATCTCCTTGGACCTCG AGTGCCACGGATACTGTCCGCGGCCGTATTGGATGGACAATGGGACCCTG CAAAATGAGCAAGCCTCGAAGTTCCGGCAGATGGTTAGTCAGGCCCGGTC AAGAAAGAGAAGACAGAAACTTCTTCTTTCTACTCGCCCATCAGCCCGCA ATACCGTCTACCCTTTCTTCAATGTAGCCCCAGACGAACTGCAAGGTCTA ACCCGAGACAGCAATGTGGCTGCTATTAATAATAGTACGCTGGTGTACAG CACCGTGCCTCTCCACCAGCTCCCCACCCCTGAAGGCACCTCGGTCTTCC CTGAGGAAGACTATACCACGTTCTCGAAGCAGTTAGAGTGGGCGCACAAC CCTTCGTCTCCCTCATCGTCAGTAGAAGGAATCTTAACCCCAAACGTGCT GGAAACGCAAGAGCCCGGAATTGTATGGGGTGACATGATGAACTCGGACG ATTTTGGCTTGGCCATGAGTAAATCCTCCCTGTCGGACTTGGATGACTTG ATGTGGAGCGCATCCCTGGATAGCCCCCACCTGCAGAAAGAACCTACTTT GTCTCCTGACCCGACAAGCCTGCAACCGACGTCCGGCATGCATATGCTGG CAGCTGCAACCTGCGGACAGACCATCTCGTGGCCCGGGACACCCCTTGAC CCCATCCCGGGAAGCAGATCCGAGGATGAGTTACTGATGCACTACTTGGA CCGGGTCTTCTACATTCAATATCCATTTTACCACACCCAAGACCGACAAG GGAGAGGTTGGCTTCTCTCACTTCTGCGGCGCATCAAACCCGCATACTAT GCCAGTTTGGCTCTCAGTGAGCTCGACTTGCTCTCGGCATCGCTTCCTAA AAGTGAGCTCCCGGCACGACTGGCGCAATTACGTACCAAAGATGGCTATC ACGACCTGGCTCTTCAGGGAATGCAGCGCATCATGGCCGACTCGTTTAGC TGGAATGCACAGAGCCAAATTACGCACAGTCTTGAGGGACTTGTTTCAAT ACTTCAACTTTTGTATTGGGAGATATTTGCGGGCGGAACTAAGAACTGGC AATGGCTTCTTCGGCTAGCTGGCAACCTGATGCCCGTGTTCATGCAGGTG CGGATGCCTTCTACACCTCATGAAACATCGAGCCAGATCTGCCCAAGTAT ACCGCTAGACAATCAGAGCCCGTCCCCCGAAGACGACTCTACTGCAAGAC TCCTCCTTGGGTCTCTCGTGTCGATGGATATTATCGCTTCTGCTTCTACC CGGCGGGCTCCCTTTCTGGATATTGATCATGTCCAGGTGCTGGACCGCTT CGGGATTTCTCTAGAAAGTCTAATAGGGTGTCGGAACTCAATCATGGCCC TGATCGCGGATGTTTCTGCGCTGGATCGATGGAAGAAAGAGTCTGAGGGG GCCCGTAAGCTCAGCATCATTGAATTAGCACAGCGTGGTGGGCAATTGGA GCAGCGCCTACGACGAGAACTCGTCGATCCCGAGCAGATGTCCGCTTCAG AGCCATTTGCAGCATGGGGCTCTTCCGCTACCCCGGGCGTTTCTCGGGCT CACCCAGGAATCAACAAGGCGTTTGGGCTTGGAGCCATCGCCTATCTCCA TGTTGTGCTCTCTGGGGCTCATCCCGAGCTGCCGGAGATTGCACAAACTG TTTCCGAGGCCATTCTTGTGTTCCAGGTGCTTCGCGATCAGCGACTCCTG TCGAGTGTGGTGTGGCCTTTTTGCATCGTGGGCTGTTTAGCGCAGCCCGA ACAACAGCCTTCTTTCCGGGAGCTCTTCACGACGGCGGAGGCCACGGAGG GAACACTGGCAGAGGCATATCGAGTGATGGAGGAATGTTGGAAGGCAAGG AAAAGTCGCACATCGGATTGCGACTGGGTTTCGGTGATGAATGAGCGGGG GGATTATGTGCTGCTTCGATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
Term | Definition |
GO:0042025 | host cell nucleus |
Vocabulary: Biological Process
Term | Definition |
GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
Term | Definition |
GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
Property Name | Value |
Note | antiSMASH:Cluster_6.18 |
DBxref | InterPro:IPR036864 |
DBxref | InterPro:IPR021858 |
DBxref | InterPro:IPR001138 |
DBxref | PFAM:PF00172 |
DBxref | PFAM:PF11951 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch6 | supercontig | ch6:3290991..3293232 + |
|