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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch6:4757185..4759078+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009172-T1 ID=KJC3_009172-T1|Name=KJC3_009172-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1894bp|location=Sequence derived from alignment at ch6:4757185..4759078+ (Aspergillus niger KJC3)
CTTTCATATGCTAGAGATGGCTACGATCAACTACACAATGTCCCCTCATC
CCATTACTGCATTAAAGCATAACCGCATGCCTCGGTCCCTTCATCGGAGG
TTTCTTCACATCGGGTTAGCCCAGGACCGCTGTTCAGCAGCGCCGTCATG
GTTGGGTGGCATCCAGGAATCCCCCCTAGATTCGTCCGTGGCGGTCAAAT
AATCTTCATAGCGGTTGTTTCCTATCTGTATTTGCTATCCAGTGTGTCTA
CTCGTATATCGTTAACCGGTAAAGCCTCGTGAACAAATGGAATCCAACAA
GCAATATGATCTGATCGTCCTGGGGCCCACGGGCTATACAGGACGGTTCT
GTGCTGACCACATTGTCAAGAACTTTCCCACCAACCTGAAGTGGGCTCTG
GCCGGTCGTTCTCTCAGCAAGTTGGAGAATATCGCCAAAGAGCTGAAGAA
TGTGAACCCGGATCGTGCCGATCCAGGTACTTGATACCGTGAATCTATAT
GTCTGTTGACCGAACATACCGTTGACTTGCTAGTAGATCTCCTCCCCGTG
CAACTCAATCGTGAGGAGTTGCACCCGTTGGTTCAAAAGACGCGAGTTAT
CATTAACTGCGTGGGTCCCTACTGTCTATACTCTACGCCCGTGATTGAAG
CTTGCGCCAGTAATGGAACTCACTATGTCGATGCGTCAGTTTGCCGCCAT
GGAATCAGTTCACCAATGTATAGCTAACCGATGTAGTACCGGAGAGACAC
ACTGGGTCAAGGAAATCATCAGTGAATACCATGAAACCGCCAAAGCGAAC
GGTGCTGTTGTATGTACCTTCTCCTCATGACTCCGCAGTACGACAGCATC
CTGACAATCAATCAGATCATCCCTTGCGTTGGCATAGAAAGCGCACCTGC
AGACCTGCTCGCATGGGCTACAGTGAAGCGAGTCCGCGAAGATCTGTCAT
GCCACACCAGATCAATCACCGGTGACATCCACGAGATCAAGTGAGATAAA
AGAACTTAACCCACGGATCATCCAATACCTAACACCAGCCCTCGCAGGTC
CTCCGGAGCAAGCGGTGGCACCCTCTCCACCGTACTCACTTTCTTTGAAA
ATGTGCCACCTTCCGAAATGCGCAAAATATCCACCCCTTTTGCACTGGCC
GCAGCTCCCCCTCCGAAAGACATCCCTCGCGAGCCGTTATGGACGAGGCT
ACTCGGTATTCGATCCGTGCGTGACTTGGGCATCTTGACCACCTCACCAT
CAGGTCTAGCAGACATCACCACCGTCCACCGCAGCAGTACCCTGATGCCG
GAGTTCTACGGACCCCGGTTCTACTTCAGACAATTCCTCCGCGCCAGGAA
CGCTTTCACCGGAATTCTATGGCATTATGCGTTCCTTTTCGCCGTTACGG
CTTTACTCCTGCCTCCGATTCGCACCCTTGTCAGGAAGTACATCTATACC
CCGGGTACTGGTCCTACTCTCGAGGATTCCGTCAACGACTTCGTCGAGTA
CCGCGCCGTCGCGACTGCGGACCAGGATACGGCAAAGCCTCAACGTGTGC
TGGGCAAGTTGAGATACCAGGGTACTATGTACGAGTTTACTGGGTTGAGT
CTGGCTGAGGCGGCCATGACTATAATTGAGAATGAGGAGAAGGTGAAGAA
GGTGTCTCGTTGCGGTATCGTGACTACTGCTACTTTGGGTCAGGAGTTTA
TTGATCGCTGGGATAAGGTCGGATGTCATATCGAGACTCAGGTCGTTGAT
AATTGATTTGCTTGTGGCCTTATCCGATTGACAAACTCGCAATATTTTGT
TATATAGCTACTTATGACTTGATTCACCTGTTTATAGAGATTTACTTGGT
TGTTAATAGTACTTACTACTTGCCATTGATTTATAATACCCCGC back to topCoding sequence (CDS) from alignment at ch6:4757185..4759078+ >KJC3_009172-T1 ID=KJC3_009172-T1|Name=KJC3_009172-T1|organism=Aspergillus niger KJC3|type=CDS|length=6225bp|location=Sequence derived from alignment at ch6:4757185..4759078+ (Aspergillus niger KJC3)
ATGGAATCCAACAAGCAATATGATCTGATCGTCCTGGGGCCCACGGGCTA
TACAGGACGGTTCTGTGCTGACCACATTGTCAAGAACTTTCCCACCAACC
TGAAGTGGGCTCTGGCCGGTCGTTCTCTCAGCAAGTTGGAGAATATCGCC
AAAGAGCTGAAGAATGTGAACCCGGATCGTGCCGATCCAGATCTCCTCCC
CGTGCAACTCAATCGTGAGGAGTTGCACCCGTTGGTTCAAAAGACGCGAG
TTATCATTAACTGCGTGGGTCCCTACTGTCTATACTCTACGCCCGTGATT
GAAGCTTGCGCCAGTAATGGAACTCACTATGTCGATGCTACCGGAGAGAC
ACACTGGGTCAAGGAAATCATCAGTGAATACCATGAAACCGCCAAAGCGA
ACGGTGCTGTTATCATCCCTTGCGTTGGCATAGAAAGCGCACCTGCAGAC
CTGCTCGCATGGGCTACAGTGAAGCGAGTCCGCGAAGATCTGTCATGCCA
CACCAGATCAATCACCGGTGACATCCACGAGATCAAGTCCTCCGGAGCAA
GCGGTGGCACCCTCTCCACCGTACTCACTTTCTTTGAAAATGTGCCACCT
TCCGAAATGCGCAAAATATCCACCCCTTTTGCACTGGCCGCAGCTCCCCC
TCCGAAAGACATCCCTCGCGAGCCGTTATGGACGAGGCTACTCGGTATTC
GATCCGTGCGTGACTTGGGCATCTTGACCACCTCACCATCAGGTCTAGCA
GACATCACCACCGTCCACCGCAGCAGTACCCTGATGCCGGAGTTCTACGG
ACCCCGGTTCTACTTCAGACAATTCCTCCGCGCCAGGAACGCTTTCACCG
GAATTCTATGGCATTATGCGTTCCTTTTCGCCGTTACGGCTTTACTCCTG
CCTCCGATTCGCACCCTTGTCAGGAAGTACATCTATACCCCGGGTACTGG
TCCTACTCTCGAGGATTCCGTCAACGACTTCGTCGAGTACCGCGCCGTCG
CGACTGCGGACCAGGATACGGCAAAGCCTCAACGTGTGCTGGGCAAGTTG
AGATACCAGGGTACTATGTACGAGTTTACTGGGTTGAGTCTGGCTGAGGC
GGCCATGACTATAATTGAGAATGAGGAGAAGGTGAAGAAGGTGTCTCGTT
GCGGTATCGTGACTACTGCTACTTTGGGTCAGGAGTTTATTGATCGCTGG
GATAAGGTCGGATGTCATATCGAGACTCAGGTCGTTGATAATTGAATGGA
ATCCAACAAGCAATATGATCTGATCGTCCTGGGGCCCACGGGCTATACAG
GACGGTTCTGTGCTGACCACATTGTCAAGAACTTTCCCACCAACCTGAAG
TGGGCTCTGGCCGGTCGTTCTCTCAGCAAGTTGGAGAATATCGCCAAAGA
GCTGAAGAATGTGAACCCGGATCGTGCCGATCCAGATCTCCTCCCCGTGC
AACTCAATCGTGAGGAGTTGCACCCGTTGGTTCAAAAGACGCGAGTTATC
ATTAACTGCGTGGGTCCCTACTGTCTATACTCTACGCCCGTGATTGAAGC
TTGCGCCAGTAATGGAACTCACTATGTCGATGCTACCGGAGAGACACACT
GGGTCAAGGAAATCATCAGTGAATACCATGAAACCGCCAAAGCGAACGGT
GCTGTTATCATCCCTTGCGTTGGCATAGAAAGCGCACCTGCAGACCTGCT
CGCATGGGCTACAGTGAAGCGAGTCCGCGAAGATCTGTCATGCCACACCA
GATCAATCACCGGTGACATCCACGAGATCAAGTCCTCCGGAGCAAGCGGT
GGCACCCTCTCCACCGTACTCACTTTCTTTGAAAATGTGCCACCTTCCGA
AATGCGCAAAATATCCACCCCTTTTGCACTGGCCGCAGCTCCCCCTCCGA
AAGACATCCCTCGCGAGCCGTTATGGACGAGGCTACTCGGTATTCGATCC
GTGCGTGACTTGGGCATCTTGACCACCTCACCATCAGGTCTAGCAGACAT
CACCACCGTCCACCGCAGCAGTACCCTGATGCCGGAGTTCTACGGACCCC
GGTTCTACTTCAGACAATTCCTCCGCGCCAGGAACGCTTTCACCGGAATT
CTATGGCATTATGCGTTCCTTTTCGCCGTTACGGCTTTACTCCTGCCTCC
GATTCGCACCCTTGTCAGGAAGTACATCTATACCCCGGGTACTGGTCCTA
CTCTCGAGGATTCCGTCAACGACTTCGTCGAGTACCGCGCCGTCGCGACT
GCGGACCAGGATACGGCAAAGCCTCAACGTGTGCTGGGCAAGTTGAGATA
CCAGGGTACTATGTACGAGTTTACTGGGTTGAGTCTGGCTGAGGCGGCCA
TGACTATAATTGAGAATGAGGAGAAGGTGAAGAAGGTGTCTCGTTGCGGT
ATCGTGACTACTGCTACTTTGGGTCAGGAGTTTATTGATCGCTGGGATAA
GGTCGGATGTCATATCGAGACTCAGGTCGTTGATAATTGAATGGAATCCA
ACAAGCAATATGATCTGATCGTCCTGGGGCCCACGGGCTATACAGGACGG
TTCTGTGCTGACCACATTGTCAAGAACTTTCCCACCAACCTGAAGTGGGC
TCTGGCCGGTCGTTCTCTCAGCAAGTTGGAGAATATCGCCAAAGAGCTGA
AGAATGTGAACCCGGATCGTGCCGATCCAGATCTCCTCCCCGTGCAACTC
AATCGTGAGGAGTTGCACCCGTTGGTTCAAAAGACGCGAGTTATCATTAA
CTGCGTGGGTCCCTACTGTCTATACTCTACGCCCGTGATTGAAGCTTGCG
CCAGTAATGGAACTCACTATGTCGATGCTACCGGAGAGACACACTGGGTC
AAGGAAATCATCAGTGAATACCATGAAACCGCCAAAGCGAACGGTGCTGT
TATCATCCCTTGCGTTGGCATAGAAAGCGCACCTGCAGACCTGCTCGCAT
GGGCTACAGTGAAGCGAGTCCGCGAAGATCTGTCATGCCACACCAGATCA
ATCACCGGTGACATCCACGAGATCAAGTCCTCCGGAGCAAGCGGTGGCAC
CCTCTCCACCGTACTCACTTTCTTTGAAAATGTGCCACCTTCCGAAATGC
GCAAAATATCCACCCCTTTTGCACTGGCCGCAGCTCCCCCTCCGAAAGAC
ATCCCTCGCGAGCCGTTATGGACGAGGCTACTCGGTATTCGATCCGTGCG
TGACTTGGGCATCTTGACCACCTCACCATCAGGTCTAGCAGACATCACCA
CCGTCCACCGCAGCAGTACCCTGATGCCGGAGTTCTACGGACCCCGGTTC
TACTTCAGACAATTCCTCCGCGCCAGGAACGCTTTCACCGGAATTCTATG
GCATTATGCGTTCCTTTTCGCCGTTACGGCTTTACTCCTGCCTCCGATTC
GCACCCTTGTCAGGAAGTACATCTATACCCCGGGTACTGGTCCTACTCTC
GAGGATTCCGTCAACGACTTCGTCGAGTACCGCGCCGTCGCGACTGCGGA
CCAGGATACGGCAAAGCCTCAACGTGTGCTGGGCAAGTTGAGATACCAGG
GTACTATGTACGAGTTTACTGGGTTGAGTCTGGCTGAGGCGGCCATGACT
ATAATTGAGAATGAGGAGAAGGTGAAGAAGGTGTCTCGTTGCGGTATCGT
GACTACTGCTACTTTGGGTCAGGAGTTTATTGATCGCTGGGATAAGGTCG
GATGTCATATCGAGACTCAGGTCGTTGATAATTGAATGGAATCCAACAAG
CAATATGATCTGATCGTCCTGGGGCCCACGGGCTATACAGGACGGTTCTG
TGCTGACCACATTGTCAAGAACTTTCCCACCAACCTGAAGTGGGCTCTGG
CCGGTCGTTCTCTCAGCAAGTTGGAGAATATCGCCAAAGAGCTGAAGAAT
GTGAACCCGGATCGTGCCGATCCAGATCTCCTCCCCGTGCAACTCAATCG
TGAGGAGTTGCACCCGTTGGTTCAAAAGACGCGAGTTATCATTAACTGCG
TGGGTCCCTACTGTCTATACTCTACGCCCGTGATTGAAGCTTGCGCCAGT
AATGGAACTCACTATGTCGATGCTACCGGAGAGACACACTGGGTCAAGGA
AATCATCAGTGAATACCATGAAACCGCCAAAGCGAACGGTGCTGTTATCA
TCCCTTGCGTTGGCATAGAAAGCGCACCTGCAGACCTGCTCGCATGGGCT
ACAGTGAAGCGAGTCCGCGAAGATCTGTCATGCCACACCAGATCAATCAC
CGGTGACATCCACGAGATCAAGTCCTCCGGAGCAAGCGGTGGCACCCTCT
CCACCGTACTCACTTTCTTTGAAAATGTGCCACCTTCCGAAATGCGCAAA
ATATCCACCCCTTTTGCACTGGCCGCAGCTCCCCCTCCGAAAGACATCCC
TCGCGAGCCGTTATGGACGAGGCTACTCGGTATTCGATCCGTGCGTGACT
TGGGCATCTTGACCACCTCACCATCAGGTCTAGCAGACATCACCACCGTC
CACCGCAGCAGTACCCTGATGCCGGAGTTCTACGGACCCCGGTTCTACTT
CAGACAATTCCTCCGCGCCAGGAACGCTTTCACCGGAATTCTATGGCATT
ATGCGTTCCTTTTCGCCGTTACGGCTTTACTCCTGCCTCCGATTCGCACC
CTTGTCAGGAAGTACATCTATACCCCGGGTACTGGTCCTACTCTCGAGGA
TTCCGTCAACGACTTCGTCGAGTACCGCGCCGTCGCGACTGCGGACCAGG
ATACGGCAAAGCCTCAACGTGTGCTGGGCAAGTTGAGATACCAGGGTACT
ATGTACGAGTTTACTGGGTTGAGTCTGGCTGAGGCGGCCATGACTATAAT
TGAGAATGAGGAGAAGGTGAAGAAGGTGTCTCGTTGCGGTATCGTGACTA
CTGCTACTTTGGGTCAGGAGTTTATTGATCGCTGGGATAAGGTCGGATGT
CATATCGAGACTCAGGTCGTTGATAATTGAATGGAATCCAACAAGCAATA
TGATCTGATCGTCCTGGGGCCCACGGGCTATACAGGACGGTTCTGTGCTG
ACCACATTGTCAAGAACTTTCCCACCAACCTGAAGTGGGCTCTGGCCGGT
CGTTCTCTCAGCAAGTTGGAGAATATCGCCAAAGAGCTGAAGAATGTGAA
CCCGGATCGTGCCGATCCAGATCTCCTCCCCGTGCAACTCAATCGTGAGG
AGTTGCACCCGTTGGTTCAAAAGACGCGAGTTATCATTAACTGCGTGGGT
CCCTACTGTCTATACTCTACGCCCGTGATTGAAGCTTGCGCCAGTAATGG
AACTCACTATGTCGATGCTACCGGAGAGACACACTGGGTCAAGGAAATCA
TCAGTGAATACCATGAAACCGCCAAAGCGAACGGTGCTGTTATCATCCCT
TGCGTTGGCATAGAAAGCGCACCTGCAGACCTGCTCGCATGGGCTACAGT
GAAGCGAGTCCGCGAAGATCTGTCATGCCACACCAGATCAATCACCGGTG
ACATCCACGAGATCAAGTCCTCCGGAGCAAGCGGTGGCACCCTCTCCACC
GTACTCACTTTCTTTGAAAATGTGCCACCTTCCGAAATGCGCAAAATATC
CACCCCTTTTGCACTGGCCGCAGCTCCCCCTCCGAAAGACATCCCTCGCG
AGCCGTTATGGACGAGGCTACTCGGTATTCGATCCGTGCGTGACTTGGGC
ATCTTGACCACCTCACCATCAGGTCTAGCAGACATCACCACCGTCCACCG
CAGCAGTACCCTGATGCCGGAGTTCTACGGACCCCGGTTCTACTTCAGAC
AATTCCTCCGCGCCAGGAACGCTTTCACCGGAATTCTATGGCATTATGCG
TTCCTTTTCGCCGTTACGGCTTTACTCCTGCCTCCGATTCGCACCCTTGT
CAGGAAGTACATCTATACCCCGGGTACTGGTCCTACTCTCGAGGATTCCG
TCAACGACTTCGTCGAGTACCGCGCCGTCGCGACTGCGGACCAGGATACG
GCAAAGCCTCAACGTGTGCTGGGCAAGTTGAGATACCAGGGTACTATGTA
CGAGTTTACTGGGTTGAGTCTGGCTGAGGCGGCCATGACTATAATTGAGA
ATGAGGAGAAGGTGAAGAAGGTGTCTCGTTGCGGTATCGTGACTACTGCT
ACTTTGGGTCAGGAGTTTATTGATCGCTGGGATAAGGTCGGATGTCATAT
CGAGACTCAGGTCGTTGATAATTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009172-T1.utr5p1 | KJC3_009172-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009172-T1.utr3p1 | KJC3_009172-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR005097 |
| DBxref | PFAM:PF03435 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch6 | supercontig | ch6:4757185..4759078 + |
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