|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:190164..193778+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009359-T2 ID=KJC3_009359-T2|Name=KJC3_009359-T2|organism=Aspergillus niger KJC3|type=mRNA|length=3615bp|location=Sequence derived from alignment at ch7:190164..193778+ (Aspergillus niger KJC3)
ACCAAATCCACATAGAGCCAAAATCACCATAGTGGAGGACAAGAGACCAC
AGAATCAACTATCAACCATCGGTGAGGGTTATGAGTGATAGGAAAGATCC
CATGCGGCGCCGGAATGTCGCCATCGCCGAGTGCGCTTTATCGACCCAAT
CACACCCACTCAAACTGATGCGGTATCGCCAGCATAAAGTGATCGCCATT
TCCCCCACCATTCAGCTAATCTTGAATTGTTTGCTTTTCTCCATCGCATC
GGCCTCAATTTTGAGAACCCACCATGGATGATATCCATAACACCCAAAAA
GACCCAGATGTCTTCATCTCGCCCACCCTCGAACCAGGCCCTGCGCTCCC
CAAAGTCGGAGACCGCACACCACGTATCGTCCACGATGAAGAGGCCCAGA
ATCTACGCAAGGGGTTGCAGGAGCGCCATACCCAGATGATAGCCATCGCG
GGCGCCATTGTACGTCAATTCCCATCTTTACAATTTGAAATGTTCATATT
TGTACGACGTACTGAATAAATATCCCACCAGGGAACCGGCCTCTTCCTCG
GTCTAGGCAGCTCGATCCAAACCGGTGGCCCGCTCGGCGCTCTACTCGGT
TATCTACTGATCGGCCTGGTGGTCTGCGCGGTGCAAATCGCCCTAGGCGA
AGTGTCAGCCCTGATGCCCGTGACCGGCTCTTTTGTCCGACACGTCGAGC
TGCTCGTCGATCCGGCTCTCGGGTTCGCAATAGGCTGGAACGTCGTCTAC
GGTTGCTTCATGTCCGTGCCCAGCGAGATCTCCGCAGCTGTCGTCCTAAT
CCAGTACTGGAACGACACCCTCAATCCCGCTATCTGGGTGACGATCCTGA
TCGTCATCTCGGCAATCGTCTCGTTCCTCTTCATCCGAGTCTACGGAGAA
GTTGAGTTCGTCTTCGCCATCCTCAAGATCCTCCTCATCATCGGCATCAT
CCTCATGGGCTTGGTGATCGACCTCGGCGGCGTCTCGGGTACTCCACGTC
TCGGATTCCATTACTGGAAAGACCCCGGCCCGTTCGTGGAATACATCGCC
TCGGGCCCGTGGGGCCGATTCCTCGGTTTCTGGGCCGTCACGACAAACGC
AGTTTATTCCTTCTCCGGGGTGGAAAGTCTAACCATCGCGGCAGCGGAAA
TGGCGAATCCAAGACAGAATATCCCCCGCGCGTGTAAACGCGTCTTTGCG
CGCGTTACCATCTTCTACTTTTTGGCTGTGCTAATCGTGGGGATGATAGT
CCCTAGTAACGATCCCCGACTGGGAAATGAATCTGGCACGGCCGCGCAGA
GTCCGTTCGTAATTGCGGCTTCCGATGCGGGGATCAAAGTAGTGCCTTCT
ATTATCAATGCCGTGGTGTTGACGTCTGCGTGGTCAGCGTCAAATCAGAG
TATCCTGGCTGGAACGCGCACGTTGTATGGTCTTGCGCTGAAGGGCCACG
CACCGGCGGTGTTTCTGCGCACAACGAGGCACGGTGTGCCGTATGCTTGT
GCGGTGGCGCAGATTTCTGTGTCCGCGTTGGCGTACCTTACGTGTCAGAA
TGAGGCATATACGGTTTTCAATTGGTTGTTGGATTTGACGGCAGCGGGGG
TGTTGATCTCGTGGGGGACGATTGCGTTGAATCATATTAGGTTGATGAGA
GGGTTCAGGGCGCAGGGATTGGATACGGCGGAAATGCCGTGGCATCATTG
GTGGTCTGGTGAGTTATTTGAATATTCTACAGGTATTGACTGTGGCTGAT
GAAAGCAGTGTATACATCCTGGTTTGCTCTGGTGATGTGTGTGATTGTTT
TGTTCACGGGCGGGTTCACGGTGTTTACTCATGGCAATTGGGATGCTTCG
AGCTTCGTGTCGTCGTATTTGTGAGTCAGATTCTGTGTTGATGGATGATG
TTGTACTAACTGAGTGGTAGGGACATTCCGCTCGTACTGGCTTTCTATCT
GGGCTATAAGTTCTACCGCAAGACAGAGATGGTATCGAGTTATGAGATGC
CGCTGGAGCAGGCTCTGCTCGAGTGTCGGAACGACCCAGATAATGTACCC
ATCCAGAGGAGCAAGTGGTCGAGGTGGAACATTTTGTGGGGATGATAGAC
CTTGGGATGCACATTCTTGTAGGTAGGTCAGGTTATCCCACAAAACTACA
TCAATAGACTGACACATGTACCGCACTCAGAGGAAAGTGATATAGACCAT
CACTGTATGACATATCATCTGATAGATTACGCAAGAGGTAACGCAAATCC
TGATTGACAAATAAATCCATGTGCTCTGGCACAGCAGCATGCTTCGAAGC
GTAATTTCTTCGGTTTACTCGCTGTCAGCTGCAATGTATGCATACAATGC
AGTGGCCTTGTCATCGCGTTTCCTGTCCAGCTCCGAGTCGGCCGCAATGT
ACGCATATAGCGCCGTGGCCTCGTCATCGCGCTTCTCTTTGTCATCAAGC
TCGGTGTCGGCGACTATATAGCCATACAGCGCCGTGGCCTCATTGCCTGC
TCTTTCCCGAAGAGCATGAAAGTCCTCTGACCTGACGCGAAGGGTCACCG
CTGCTAGTTTGTCAGTTGCATGGACACCACATCGATTCTAAGTTTGTTTC
GGGGCTTGCATACGCTTGGCTGTCGGGGCAGAGGTGGCCATATGGCTCAG
CAACAGTCCGTAGGTGGCCGAGAGGAGGATAGAATACTGCATCGTGGGCT
GGATACGCTTCACGGAGGTCGTGGGAGAGTCGAGAGTAGGACAAAAGATG
GTCTATCAAGCAGAAGGGCAGGAAGAAGGAACCTATTTATGTGAGGCCTC
GGGCATCGGCCACTCTGTTCGCACCACCCCTACACAGTCGCCCGTGATCA
GGCGGGGTGAAACAGCTACACAACCAAAGTGTGCGATCCTTTCGTATCAG
TGCGACTGTGACGGCAGCAAGCATCTGCGCCTGGTTCAAAGAGGAAAGCA
GGCGTCAACGCCATGCTGGATGGCATGTGCGGTGGCGACAGTTCACAAGC
ACTAATGCGTACTTGGCAGACATTTGATGCATCCTAAAATTACCAGGGAT
GTTGCGCAGTTCAGCTGACCATATTGCGCGGAGCGAGGATATTTGATCTC
CTTGAACCGAACACTGCCTATTCTTTTCCAGATCATCTTTCTCAAGTCTG
ACAGACAATGGTGAAGATGAAGCCGGCCGTATCTCCATCATACGAACCTC
TAGGAACCAGAGACAACGACGATGTTGCCTACAGCGTCTCCGGAGATACA
CAAAGCGAGGAGGATGTATCTCTCTTGAAACAAGCACCCCGGCCGTCTGA
ACACTTCAGTAGACGACAGAAATTGCTCCTCTGGCTCAATGCTACTGTTT
TCGCACTGTCAGTGTTTCTTTTCGTCATCACTGTCTGCATTTTCCGGGGC
ACTGGTGACGCAAACCATCTCCTACGAAAAACCTCCGAGTACTGTGAGTG
TGACTGACGACGAGCGTCTTCTCAGTTTGCTGACCAGTTGCAGCTCCTGT
GTTCGATCGCCTTGAGATACCCCTCATCAGCCAGAAGATGAATGCAACAC
TGTTGGAGCCAGACCCCCTCCCCATCTATCGCCAACCCCCGAGCCCCGAG
GTCGACGCAGCCTGG back to topCoding sequence (CDS) from alignment at ch7:190164..193778+ >KJC3_009359-T2 ID=KJC3_009359-T2|Name=KJC3_009359-T2|organism=Aspergillus niger KJC3|type=CDS|length=4437bp|location=Sequence derived from alignment at ch7:190164..193778+ (Aspergillus niger KJC3)
ATGGATGATATCCATAACACCCAAAAAGACCCAGATGTCTTCATCTCGCC
CACCCTCGAACCAGGCCCTGCGCTCCCCAAAGTCGGAGACCGCACACCAC
GTATCGTCCACGATGAAGAGGCCCAGAATCTACGCAAGGGGTTGCAGGAG
CGCCATACCCAGATGATAGCCATCGCGGGCGCCATTGGAACCGGCCTCTT
CCTCGGTCTAGGCAGCTCGATCCAAACCGGTGGCCCGCTCGGCGCTCTAC
TCGGTTATCTACTGATCGGCCTGGTGGTCTGCGCGGTGCAAATCGCCCTA
GGCGAAGTGTCAGCCCTGATGCCCGTGACCGGCTCTTTTGTCCGACACGT
CGAGCTGCTCGTCGATCCGGCTCTCGGGTTCGCAATAGGCTGGAACGTCG
TCTACGGTTGCTTCATGTCCGTGCCCAGCGAGATCTCCGCAGCTGTCGTC
CTAATCCAGTACTGGAACGACACCCTCAATCCCGCTATCTGGGTGACGAT
CCTGATCGTCATCTCGGCAATCGTCTCGTTCCTCTTCATCCGAGTCTACG
GAGAAGTTGAGTTCGTCTTCGCCATCCTCAAGATCCTCCTCATCATCGGC
ATCATCCTCATGGGCTTGGTGATCGACCTCGGCGGCGTCTCGGGTACTCC
ACGTCTCGGATTCCATTACTGGAAAGACCCCGGCCCGTTCGTGGAATACA
TCGCCTCGGGCCCGTGGGGCCGATTCCTCGGTTTCTGGGCCGTCACGACA
AACGCAGTTTATTCCTTCTCCGGGGTGGAAAGTCTAACCATCGCGGCAGC
GGAAATGGCGAATCCAAGACAGAATATCCCCCGCGCGTGTAAACGCGTCT
TTGCGCGCGTTACCATCTTCTACTTTTTGGCTGTGCTAATCGTGGGGATG
ATAGTCCCTAGTAACGATCCCCGACTGGGAAATGAATCTGGCACGGCCGC
GCAGAGTCCGTTCGTAATTGCGGCTTCCGATGCGGGGATCAAAGTAGTGC
CTTCTATTATCAATGCCGTGGTGTTGACGTCTGCGTGGTCAGCGTCAAAT
CAGAGTATCCTGGCTGGAACGCGCACGTTGTATGGTCTTGCGCTGAAGGG
CCACGCACCGGCGGTGTTTCTGCGCACAACGAGGCACGGTGTGCCGTATG
CTTGTGCGGTGGCGCAGATTTCTGTGTCCGCGTTGGCGTACCTTACGTGT
CAGAATGAGGCATATACGGTTTTCAATTGGTTGTTGGATTTGACGGCAGC
GGGGGTGTTGATCTCGTGGGGGACGATTGCGTTGAATCATATTAGGTTGA
TGAGAGGGTTCAGGGCGCAGGGATTGGATACGGCGGAAATGCCGTGGCAT
CATTGGTGGTCTGTGTATACATCCTGGTTTGCTCTGGTGATGTGTGTGAT
TGTTTTGTTCACGGGCGGGTTCACGGTGTTTACTCATGGCAATTGGGATG
CTTCGAGCTTCGTGTCGTCGTATTTGTGAATGGATGATATCCATAACACC
CAAAAAGACCCAGATGTCTTCATCTCGCCCACCCTCGAACCAGGCCCTGC
GCTCCCCAAAGTCGGAGACCGCACACCACGTATCGTCCACGATGAAGAGG
CCCAGAATCTACGCAAGGGGTTGCAGGAGCGCCATACCCAGATGATAGCC
ATCGCGGGCGCCATTGGAACCGGCCTCTTCCTCGGTCTAGGCAGCTCGAT
CCAAACCGGTGGCCCGCTCGGCGCTCTACTCGGTTATCTACTGATCGGCC
TGGTGGTCTGCGCGGTGCAAATCGCCCTAGGCGAAGTGTCAGCCCTGATG
CCCGTGACCGGCTCTTTTGTCCGACACGTCGAGCTGCTCGTCGATCCGGC
TCTCGGGTTCGCAATAGGCTGGAACGTCGTCTACGGTTGCTTCATGTCCG
TGCCCAGCGAGATCTCCGCAGCTGTCGTCCTAATCCAGTACTGGAACGAC
ACCCTCAATCCCGCTATCTGGGTGACGATCCTGATCGTCATCTCGGCAAT
CGTCTCGTTCCTCTTCATCCGAGTCTACGGAGAAGTTGAGTTCGTCTTCG
CCATCCTCAAGATCCTCCTCATCATCGGCATCATCCTCATGGGCTTGGTG
ATCGACCTCGGCGGCGTCTCGGGTACTCCACGTCTCGGATTCCATTACTG
GAAAGACCCCGGCCCGTTCGTGGAATACATCGCCTCGGGCCCGTGGGGCC
GATTCCTCGGTTTCTGGGCCGTCACGACAAACGCAGTTTATTCCTTCTCC
GGGGTGGAAAGTCTAACCATCGCGGCAGCGGAAATGGCGAATCCAAGACA
GAATATCCCCCGCGCGTGTAAACGCGTCTTTGCGCGCGTTACCATCTTCT
ACTTTTTGGCTGTGCTAATCGTGGGGATGATAGTCCCTAGTAACGATCCC
CGACTGGGAAATGAATCTGGCACGGCCGCGCAGAGTCCGTTCGTAATTGC
GGCTTCCGATGCGGGGATCAAAGTAGTGCCTTCTATTATCAATGCCGTGG
TGTTGACGTCTGCGTGGTCAGCGTCAAATCAGAGTATCCTGGCTGGAACG
CGCACGTTGTATGGTCTTGCGCTGAAGGGCCACGCACCGGCGGTGTTTCT
GCGCACAACGAGGCACGGTGTGCCGTATGCTTGTGCGGTGGCGCAGATTT
CTGTGTCCGCGTTGGCGTACCTTACGTGTCAGAATGAGGCATATACGGTT
TTCAATTGGTTGTTGGATTTGACGGCAGCGGGGGTGTTGATCTCGTGGGG
GACGATTGCGTTGAATCATATTAGGTTGATGAGAGGGTTCAGGGCGCAGG
GATTGGATACGGCGGAAATGCCGTGGCATCATTGGTGGTCTGTGTATACA
TCCTGGTTTGCTCTGGTGATGTGTGTGATTGTTTTGTTCACGGGCGGGTT
CACGGTGTTTACTCATGGCAATTGGGATGCTTCGAGCTTCGTGTCGTCGT
ATTTGTGAATGGATGATATCCATAACACCCAAAAAGACCCAGATGTCTTC
ATCTCGCCCACCCTCGAACCAGGCCCTGCGCTCCCCAAAGTCGGAGACCG
CACACCACGTATCGTCCACGATGAAGAGGCCCAGAATCTACGCAAGGGGT
TGCAGGAGCGCCATACCCAGATGATAGCCATCGCGGGCGCCATTGGAACC
GGCCTCTTCCTCGGTCTAGGCAGCTCGATCCAAACCGGTGGCCCGCTCGG
CGCTCTACTCGGTTATCTACTGATCGGCCTGGTGGTCTGCGCGGTGCAAA
TCGCCCTAGGCGAAGTGTCAGCCCTGATGCCCGTGACCGGCTCTTTTGTC
CGACACGTCGAGCTGCTCGTCGATCCGGCTCTCGGGTTCGCAATAGGCTG
GAACGTCGTCTACGGTTGCTTCATGTCCGTGCCCAGCGAGATCTCCGCAG
CTGTCGTCCTAATCCAGTACTGGAACGACACCCTCAATCCCGCTATCTGG
GTGACGATCCTGATCGTCATCTCGGCAATCGTCTCGTTCCTCTTCATCCG
AGTCTACGGAGAAGTTGAGTTCGTCTTCGCCATCCTCAAGATCCTCCTCA
TCATCGGCATCATCCTCATGGGCTTGGTGATCGACCTCGGCGGCGTCTCG
GGTACTCCACGTCTCGGATTCCATTACTGGAAAGACCCCGGCCCGTTCGT
GGAATACATCGCCTCGGGCCCGTGGGGCCGATTCCTCGGTTTCTGGGCCG
TCACGACAAACGCAGTTTATTCCTTCTCCGGGGTGGAAAGTCTAACCATC
GCGGCAGCGGAAATGGCGAATCCAAGACAGAATATCCCCCGCGCGTGTAA
ACGCGTCTTTGCGCGCGTTACCATCTTCTACTTTTTGGCTGTGCTAATCG
TGGGGATGATAGTCCCTAGTAACGATCCCCGACTGGGAAATGAATCTGGC
ACGGCCGCGCAGAGTCCGTTCGTAATTGCGGCTTCCGATGCGGGGATCAA
AGTAGTGCCTTCTATTATCAATGCCGTGGTGTTGACGTCTGCGTGGTCAG
CGTCAAATCAGAGTATCCTGGCTGGAACGCGCACGTTGTATGGTCTTGCG
CTGAAGGGCCACGCACCGGCGGTGTTTCTGCGCACAACGAGGCACGGTGT
GCCGTATGCTTGTGCGGTGGCGCAGATTTCTGTGTCCGCGTTGGCGTACC
TTACGTGTCAGAATGAGGCATATACGGTTTTCAATTGGTTGTTGGATTTG
ACGGCAGCGGGGGTGTTGATCTCGTGGGGGACGATTGCGTTGAATCATAT
TAGGTTGATGAGAGGGTTCAGGGCGCAGGGATTGGATACGGCGGAAATGC
CGTGGCATCATTGGTGGTCTGTGTATACATCCTGGTTTGCTCTGGTGATG
TGTGTGATTGTTTTGTTCACGGGCGGGTTCACGGTGTTTACTCATGGCAA
TTGGGATGCTTCGAGCTTCGTGTCGTCGTATTTGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009359-T2.utr5p1 | KJC3_009359-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_009359-T2.utr3p1 | KJC3_009359-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR004841 |
| DBxref | PFAM:PF13520 |
| DBxref | PFAM:PF00324 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:190164..193778 + |
|
