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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:261070..262403+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009390-T1 ID=KJC3_009390-T1|Name=KJC3_009390-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1334bp|location=Sequence derived from alignment at ch7:261070..262403+ (Aspergillus niger KJC3) CATCCCATCCTCATCCTCAACATCAGCCCCACACCCGGCAACAACAACAG
GAACATCCCTACTTACGTTCGATTACCTATCATTAACCTCCAAAATGTCC
GACCCCCAACACCAAATTCGCCACATCAACCCCAATTACCTGGAAACATT
CATCCAGTCCATCCTCACCAAAAACGGCGTTTCCACCGACCACGCCAAGA
TCATATCATCGTGCCTCGTGCAAGCCGACCTCCGCGGCGTAGACACGCAC
GGCTCCAACCGCATCCCCTCATACATGCAACGTATCCGGCAAAAAGTCCT
CTCACCCAGTGCCACCCCCACCTTGACTGAGAAAACCCCCGTCGTCGCAC
AAGTAGACGGCCACAATGCCTTCGGCTTCGTCTCCGCGCACATGGGCATG
CAACGCGCCATTGAAATGGCCAAGGTATACGGCATCGGTCTCGTATCCAT
CAAGCACTCGAACCACTTCGGCATGTCCGCATGGCTAGTCCAACAGGCCC
TGGACGCAGGGATGATGTCCCTCGTGTTCACGAATTCCTCGCCCGCCCTA
CCCGTCTGGGGCGGTAAATCTAAGCTCATGGGCGTGTCTCCGATCGCGTG
CGGTGCTCCGGCTGGATCGGCTCCGCCGTTTATTCTGGATATGGCGCCGT
CCATCGCCGCCCGGGGAAAGATCTATAAGGCGCTTCGCCGCGGAGAGAAA
ATCCCGACTGATTGGGCGCTTGATGGGGAGGGCAATATCACAGATGATCC
TGCTAAGGCACTTCAGGGTGTGATGCTCCCCATGGGTGGGCCGAAGGGGT
CTGCGCTGGCGATCATGATGGATGTGTTTTCTGGGGTGTTGTCCGGGTCT
GCGTTTGCTGGGGAAGTGACGGGCCCGTATGATCCGTCTAAGCCGGCGGA
TGTGGGGCATTTCTTGGTGGCGATTAAGCCGGATTTGTTTATGGGGTTGG
AGGAGTTTAAGGAGAGGATGGATTATTTGTATCAGAAGGTCGTGGGGAGT
GACAAGATGGCGGGTGTGGAGAGGATTTATTATCCCGGGGAGATTGAGCA
GATTACGAGGGAGACGAGGTTGAAGGAGGGCATTCCGTTTACGGAAGCAG
AGATTGAGGCGTTGAATAAGGAGGCGGAGATGGTAGGTGCGGAGAAGTTG
AGGGTTGATTAGGATTATTGGTGATGTATTGGGAATTGATGGCCAGATGA
GTACAGGCCGGGTGTAGGTTTGAAGAATACATGTTTACATGATATCATTG
TACAATGGAATCCTACTATATGAAGTATAGTCACACCTTGAGACCATGAG
GCCCATATGGCTCGAATTGACAAAGCCAGGGAAC back to topCoding sequence (CDS) from alignment at ch7:261070..262403+ >KJC3_009390-T1 ID=KJC3_009390-T1|Name=KJC3_009390-T1|organism=Aspergillus niger KJC3|type=CDS|length=1068bp|location=Sequence derived from alignment at ch7:261070..262403+ (Aspergillus niger KJC3) ATGTCCGACCCCCAACACCAAATTCGCCACATCAACCCCAATTACCTGGA AACATTCATCCAGTCCATCCTCACCAAAAACGGCGTTTCCACCGACCACG CCAAGATCATATCATCGTGCCTCGTGCAAGCCGACCTCCGCGGCGTAGAC ACGCACGGCTCCAACCGCATCCCCTCATACATGCAACGTATCCGGCAAAA AGTCCTCTCACCCAGTGCCACCCCCACCTTGACTGAGAAAACCCCCGTCG TCGCACAAGTAGACGGCCACAATGCCTTCGGCTTCGTCTCCGCGCACATG GGCATGCAACGCGCCATTGAAATGGCCAAGGTATACGGCATCGGTCTCGT ATCCATCAAGCACTCGAACCACTTCGGCATGTCCGCATGGCTAGTCCAAC AGGCCCTGGACGCAGGGATGATGTCCCTCGTGTTCACGAATTCCTCGCCC GCCCTACCCGTCTGGGGCGGTAAATCTAAGCTCATGGGCGTGTCTCCGAT CGCGTGCGGTGCTCCGGCTGGATCGGCTCCGCCGTTTATTCTGGATATGG CGCCGTCCATCGCCGCCCGGGGAAAGATCTATAAGGCGCTTCGCCGCGGA GAGAAAATCCCGACTGATTGGGCGCTTGATGGGGAGGGCAATATCACAGA TGATCCTGCTAAGGCACTTCAGGGTGTGATGCTCCCCATGGGTGGGCCGA AGGGGTCTGCGCTGGCGATCATGATGGATGTGTTTTCTGGGGTGTTGTCC GGGTCTGCGTTTGCTGGGGAAGTGACGGGCCCGTATGATCCGTCTAAGCC GGCGGATGTGGGGCATTTCTTGGTGGCGATTAAGCCGGATTTGTTTATGG GGTTGGAGGAGTTTAAGGAGAGGATGGATTATTTGTATCAGAAGGTCGTG GGGAGTGACAAGATGGCGGGTGTGGAGAGGATTTATTATCCCGGGGAGAT TGAGCAGATTACGAGGGAGACGAGGTTGAAGGAGGGCATTCCGTTTACGG AAGCAGAGATTGAGGCGTTGAATAAGGAGGCGGAGATGGTAGGTGCGGAG AAGTTGAGGGTTGATTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
Term | Definition |
GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
Term | Definition |
GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_009390-T1.utr5p1 | KJC3_009390-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_009390-T1.utr3p1 | KJC3_009390-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
Property Name | Value |
Note | antiSMASH:Cluster_7.2 |
DBxref | InterPro:IPR036111 |
DBxref | InterPro:IPR043144 |
DBxref | InterPro:IPR043143 |
DBxref | InterPro:IPR003767 |
DBxref | PFAM:PF02615 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch7 | supercontig | ch7:261070..262403 + |
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