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KJC3_009442-T1, KJC3_009442-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_009442-T1
Unique NameKJC3_009442-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:406802..409309-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_009442-T1 ID=KJC3_009442-T1|Name=KJC3_009442-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2508bp|location=Sequence derived from alignment at ch7:406802..409309- (Aspergillus niger KJC3)
GTTTCTTTGACTATTAACGTCCACCCTACGTTATCTTGCGCATGAACAAC
CTACTGCGTACCTGTCATGGAGCATATTAAGCAGTCCTTCGCGAAAGCGA
AGCATCAGAACCGTGCTGCTCTGGGGGCCTATGTTACCGCTGGGTATCCG
ACAGTCAAAGAGACGCCAGATATCCTACTCAGTCTCGAAAGCAGCGGTGC
AGGTGAGTCGCCTTTGAATATATCTTGACGAATCACGTGTGCATGACATC
TAACGCACTACGACTGAATAGACATGATTGAGCTGGGCATGCCGTTTTCT
GACCCCATTGCGGACGGCCCGATTATCCAAGAGGCCAATATGATCGCTCT
CGCCAATGGTGTCACCATCACAGGGGTATTGGACATGGTGCGAGAAGCAA
GACGACGGGGACTAAAGATACCCGTTCTGCTCATGGGGTACTATAATCCA
GTCATCCGCTATGGTGAGGAGAAGTTGTTGCATGACTGCAAGCAGGCAGG
CGTACATGGGTTCGTCCTGGTGGACCTCCCCATTGAGGAAGCCGTTCGGT
TCAGAAGACTCTCTGCCACGCATGGGTACGTACATGATCGTCTGTCTTTC
TAGTTATGAGCTAAAGAACGCCAGGCTTTCTTATATCCCCCTCATTGCTC
CCTCTACGTCTATACCTCGCATGAAAGCCTTGTGCAGCATAGCCGACTCA
TTTATCTTGCTGTGTCGAGAATGGGTGTGACTGGTGCCTCCCAGTCACTA
AGCGCCAACCTTCCTGAGTTTCTTGACCGCATCCACACCTATGCCGGCGA
CACACCGATTGCTCTCGGCTTTGGCATCAGTACACGAGAACACTTTCTAT
CCGTACAAGCCTTGACTGAAGGCTGTATCATTGGCAGTCAGATCATCAGT
ACCATCGGCGCTGCGCTACCCGGTCGCGCTGCTGAATACGTCGGGAAGTA
CCTGTCTGGTATCACCGGGCGCAAGCTCGAGCGAGATGAGCACGGTGCGA
TTGTCCGTGAGGTCACTGTGTTAGAACCCCCTGTGACTAGGGTGAGGCCT
CAAGCGATGACTTCAGAGGGTTCACGTTCGGAAACCACCGACCTCACAGC
CGAGCAGGATTCCGTGCCATCCACGCGATTCGGCGAATTTGGTGGCCAAT
ACGTGTCCGAATCGTTGATGGGCTGTTTATCTGAATTAGACCGGGCCTTT
GAAGGGGTACGACAAGACCCGGCCTTCTGGGAAGAGTACCGCTCCTATTA
TCCTTATATGGGTCGGCCGAGTGGATTGTACTTTGCTCAACACCTTACTG
AAAAGATTGGTGGTGCAAATATCTGGATCAAACGGGAAGATCTCAATCAC
ACTGGCAGCCACAAGATCAATAATGCCCTGGGCCAGATCCTACTAGCTCG
ACGACTGGGAAAGTCACGCATTATCGCCGAAACGGGCGCGGGCCAGCATG
GCGTGGCCACTGCGACGGTCTGCGCCAAATTCGGAATGGAATGTGTTGTC
TACATGGGCGCTGAGGATGTTCGTCGTCAAGCGCTGAATGTGTTCCGGAT
GAAGCTTCTCGGTGCTAAAGTAGTACCAGTGACATCTGGTAGTCGCACCC
TGCGTGATGCAGTGAATGAAGCATTGCGTGCGTGGGTCAAAGATGTTGAG
ACCACTCATTATATTCTCGGTTCGGTTGTTGGCCCTCACCCGTTCCCTAC
TATCGTGCGCACCTTCCAGTCCATCATTGGGCAGGAAACGAAAGAACAGA
TGCGACAGGCTATCGGAAAACTCCCTGACGCTGTTGTGGCCTGTGTCGGG
GGAGGCAGCAATGCATCAGGAATGTTCTATCCTTTCATAGACGAGCCAAG
TGTCCAGATGCTGGGTGTGGAAGCCGGTGGCGATGGCCTCGATACCTCAC
GCCATTCAGCAACCCTGTCCGGTGGCAGTAAGGGAGTCCTTCATGGAGTA
TACACCTATCTCTTACAGGACGAACATGGGCAGATCTCGGAGACACACTC
TGTCTCGGCTGGTATGGACTACCCAGCGGTAGGGCCCGAACTCAGCTCCT
GGAAGGACAGTGGAAGGGCCCGATTCATTGCAGCCACCGATTCCCAGGCC
CTGGCTGGCTTCCGCGCTCTAGCAATGTACGAAGGCATCATTCCCGCGCT
AGAGTCCTCTCACGCTGTCTACGGTGCTATTGAACTCGCCAAGACAATGA
AGAAGGGCGAACAGGATATTGTTCTCAACCTTAGCGGACGAGGTGACAAG
GATGTCAATACTGTCGCTGAGGTCCTGCCTCGTCTGGGACCTGAGATCGG
GTGGGATTTGTGGTTTTGATGTTTGATGCTGTGGTTTGGATCAGTTGGTG
TACCAAATAGATTTGGATGAGACTTGATTAGATCGTACGGGAGTTCTTAC
TTACATAGAGGGTAGGGGTTAGCTGACATTTTATCATATAGAGTAATCAT
GTTGGAGATCAGTCTATGAATACTGGCAAGTGAACAATAGAAAGATTGCA
TTAAGGCA
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Coding sequence (CDS) from alignment at ch7:406802..409309-

>KJC3_009442-T1 ID=KJC3_009442-T1|Name=KJC3_009442-T1|organism=Aspergillus niger KJC3|type=CDS|length=1599bp|location=Sequence derived from alignment at ch7:406802..409309- (Aspergillus niger KJC3)
ATGGGTGTGACTGGTGCCTCCCAGTCACTAAGCGCCAACCTTCCTGAGTT
TCTTGACCGCATCCACACCTATGCCGGCGACACACCGATTGCTCTCGGCT
TTGGCATCAGTACACGAGAACACTTTCTATCCGTACAAGCCTTGACTGAA
GGCTGTATCATTGGCAGTCAGATCATCAGTACCATCGGCGCTGCGCTACC
CGGTCGCGCTGCTGAATACGTCGGGAAGTACCTGTCTGGTATCACCGGGC
GCAAGCTCGAGCGAGATGAGCACGGTGCGATTGTCCGTGAGGTCACTGTG
TTAGAACCCCCTGTGACTAGGGTGAGGCCTCAAGCGATGACTTCAGAGGG
TTCACGTTCGGAAACCACCGACCTCACAGCCGAGCAGGATTCCGTGCCAT
CCACGCGATTCGGCGAATTTGGTGGCCAATACGTGTCCGAATCGTTGATG
GGCTGTTTATCTGAATTAGACCGGGCCTTTGAAGGGGTACGACAAGACCC
GGCCTTCTGGGAAGAGTACCGCTCCTATTATCCTTATATGGGTCGGCCGA
GTGGATTGTACTTTGCTCAACACCTTACTGAAAAGATTGGTGGTGCAAAT
ATCTGGATCAAACGGGAAGATCTCAATCACACTGGCAGCCACAAGATCAA
TAATGCCCTGGGCCAGATCCTACTAGCTCGACGACTGGGAAAGTCACGCA
TTATCGCCGAAACGGGCGCGGGCCAGCATGGCGTGGCCACTGCGACGGTC
TGCGCCAAATTCGGAATGGAATGTGTTGTCTACATGGGCGCTGAGGATGT
TCGTCGTCAAGCGCTGAATGTGTTCCGGATGAAGCTTCTCGGTGCTAAAG
TAGTACCAGTGACATCTGGTAGTCGCACCCTGCGTGATGCAGTGAATGAA
GCATTGCGTGCGTGGGTCAAAGATGTTGAGACCACTCATTATATTCTCGG
TTCGGTTGTTGGCCCTCACCCGTTCCCTACTATCGTGCGCACCTTCCAGT
CCATCATTGGGCAGGAAACGAAAGAACAGATGCGACAGGCTATCGGAAAA
CTCCCTGACGCTGTTGTGGCCTGTGTCGGGGGAGGCAGCAATGCATCAGG
AATGTTCTATCCTTTCATAGACGAGCCAAGTGTCCAGATGCTGGGTGTGG
AAGCCGGTGGCGATGGCCTCGATACCTCACGCCATTCAGCAACCCTGTCC
GGTGGCAGTAAGGGAGTCCTTCATGGAGTATACACCTATCTCTTACAGGA
CGAACATGGGCAGATCTCGGAGACACACTCTGTCTCGGCTGGTATGGACT
ACCCAGCGGTAGGGCCCGAACTCAGCTCCTGGAAGGACAGTGGAAGGGCC
CGATTCATTGCAGCCACCGATTCCCAGGCCCTGGCTGGCTTCCGCGCTCT
AGCAATGTACGAAGGCATCATTCCCGCGCTAGAGTCCTCTCACGCTGTCT
ACGGTGCTATTGAACTCGCCAAGACAATGAAGAAGGGCGAACAGGATATT
GTTCTCAACCTTAGCGGACGAGGTGACAAGGATGTCAATACTGTCGCTGA
GGTCCTGCCTCGTCTGGGACCTGAGATCGGGTGGGATTTGTGGTTTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0004834tryptophan synthase activity
Vocabulary: Biological Process
TermDefinition
GO:0000162tryptophan biosynthetic process
GO:0006568tryptophan metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TRP3_3KJC3_009442Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009442-T1KJC3_009442-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009442-T1.cdsKJC3_009442-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009442-T1.utr3p1KJC3_009442-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009442-T1.exon3KJC3_009442-T1.exon3Aspergillus niger KJC3exon
KJC3_009442-T1.exon2KJC3_009442-T1.exon2Aspergillus niger KJC3exon
KJC3_009442-T1.exon1KJC3_009442-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_009442-T1.utr5p3KJC3_009442-T1.utr5p3Aspergillus niger KJC3five_prime_UTR
KJC3_009442-T1.utr5p2KJC3_009442-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_009442-T1.utr5p1KJC3_009442-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR011060
DBxrefInterPro:IPR023026
DBxrefInterPro:IPR006653
DBxrefInterPro:IPR001926
DBxrefInterPro:IPR006654
DBxrefInterPro:IPR013785
DBxrefInterPro:IPR036052
DBxrefInterPro:IPR002028
DBxrefPFAM:PF00291
Productanthranilate synthase / indole-3-glycerol phosphate synthase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:406802..409309 -
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