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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:1317752..1321753- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_009751-T1 ID=KJC3_009751-T1|Name=KJC3_009751-T1|organism=Aspergillus niger KJC3|type=mRNA|length=4002bp|location=Sequence derived from alignment at ch7:1317752..1321753- (Aspergillus niger KJC3) AACTTATTTATATTTCTCTCTAGGGATTGGCTCAACCCATTGTCTGGATG
CCGGACTTGAACATGTGCCTTCCCTGCCATTCCGTGCCATCGACTCCATC
TGCAACAAATAAGAATCCCCAATGTTGCATGTCCGCCCATAGGTATTCCC
ATCTTCTGTGAAGCCAATTGACCTTAGAGCTGGTCTTTTTGTTTCTCAGA
ACTTCCTGACGAGGTCTTGGGCAATCATTCTTCCCAGACATTCGTTTATC
TTGTTTTCCTCTTTCTTTCTCTCTCTTTTCCTCTGCCTCCGTCCTCCTAT
CCCGTTCATACTACTCGGAGACCATATAATCATATTCTTTCTGTCTCTCC
TCTGCCCAAATTTGCCAAGTAACAACAGAACTTCTATACTATATTGCCAG
AGCGGTGCCCAGCACTTTCGTTATTTTCTTCACCCCCGATAGCGCTGCGC
CCCCTGCGAGCACAGTGCGCAGTGTCAGTCCCGGTTTCTGTAGTTTGATT
CCGCATTGGCGAGAGATCGGGGGCGAAACTCGCACTTGGAGTGAAGTTTA
TAGCGACTGAAACAATCAATTGGCTTGAGGAGAGTAATCCTAGGCCTGAT
CAGATTGTTTCAATCATGGAGTTTCCATTCTTGCGAGCATTTATTGCCCT
CTTGTTAGTATTGACCTGAACTCTGGCCTGGAGCTTACTTTTGATGTATC
GCCAGTGGTTGGACATCTGATCGTATCAAGGTTCTCTGGCTGACTTTCCT
GATACATAGTTTATATCGCTACTTCCGCCTTGTTGTGAATCTCTTTTCTT
TCTGGACGTTCAAACCAATTCCTCCGCCGGAAAATCCGAAGTTAACTGCC
CAAGATGTAACGGTTATTTTACCAACGTTAGAGGGGTGTGGTGATGAACT
CGTGGAAACCATAAGAACGATTCTCGACACCCAGCCTTATGAACTTCTTC
TGGTCACCATTGAAGCGAATCGACAAAAGGCCGAGAATATGCTGAGCTTG
ATGCCCGCTTCGAAGTCAAGAATCCGCTTGTTCACCGTTACCCACCCCAA
CAAGCGCCGACAAATGACTAGAGCGATCCCGGAAGTCCGGACTACTATCA
CGGTATTCGCAGATGATGACGTGAGCTGGCCACGCACAGTCCTTCCTTGG
ATGCTAGCACCTTTTGAGAAGGATGAGCGATTCGGTGGTGTGGTAACTTG
CCAACGTCTACGACGGGCTGTTTCGCCATCATTTTCTCAACGCATATGGG
GATTTCTGGGCGCTCTTTACTTGGAACGAAGAAACTTCGATTGCGCGGCA
ACAACGCATATTGACGGTGGGCTTCCCTGCATGTCAGGCCGGACAGTCGC
ATACAGAACAGATATCCTTCAGAATGAAGGCTTCACGTATGGATTCACGA
ACGAGGAATGGTGGTTTGGGAAGTACCAATTGAACGCAGACGACGACAAT
TTCATTACCCGCTGGATGGTGTCACATGGCTGGGAGACTTTCATGCAATA
TCATCCTGAAGCGGAGGTCCTGACAACTCTGGAAGACAACCCCAAGTTTC
TCAAACAGTGCGCGCGCTGGTCCCGAAGCAACTGGAGGAGCAACCTTACA
AGCATGTTCCATGAAAAACACATCTGGTAGTAAGTTTACCCCTTTTAACT
TGTCTGGCGGGTGTGCGTACAGTGCACACCGGGACGGATGTCTATGTCCT
GCTATGAATTTGCCTTTCATTCACGGACCCTACTCGCTTCCTGCATCATT
AGTCAATGATGCCGTTGAATGCAAGATTTCCCTTCATTCTGATTATAATT
TCCCGGATACTACGACAGACTTAAGGAACTGGTCTTGGAAGGCTGGATCG
TTCTTAGTCTTGGTAACCGACTGTGGAAAATTTTTGTTTGGCCACTTAAT
GCAAATGTCTGTCTGATCCGCACGCTAACGTTTGGTTTACTGTAATACTA
GTCGCCAGCCTTGGAGCGCATACGCTGTCCACTTGACGACGCTTTCGCCG
CCAGCTCTCCTCGGCGATTTATTGCTCCTTATACTTTGTCACAAGGCTAC
GGTTTCTTGGGACAATGATACGCACGCGCTAGCTATGCAAGCTCTCGGAC
TGTGGATGTTTATAAGCAAGTTCATCAAACTTCTCGGACATTACATCCGT
TACCCGGTTGATGTTATCCTTTTGCCGGTGTCCATTCTCTTCGGCTATTT
TCACGGGGCTATTAAAATATACGCCGTGCTAACTCTGAACGTGGTAAGTT
GCAGCACCCCAACACAACATAAGTTCTGGTCCGTTGTTTCGTTTCTACAG
AGGGTGCATGTACAAGTGCAGCCTAGTATCTTTGGGCGACGCTTGTAGCA
TGGAAGTGGGCTCTAGCCCTTGGCCTGCTTCCGTGCTCGACACCCAACCC
CTCCCATAATGCAATTGCATTGGCCATGGGCCTCACCTCATTCTCGCCCT
TTCTGTATCCACCCACGGCCTTCCCCGTCTTGGTAACCCGCTTTTGCCTC
TGCATCGTTTTATTTTTTACTTGCGTTTCTTTTTGCCCTCTGGCCTTCTA
CTTTTGTCTTAGCTTGCTTGTCGCTTTTTCTTTCGGGTTTCTCTCCTCAT
TATTGGTCTCATTTCCCTTTTCTTATCATCTGTGCTTCGCTGTCCGAACA
ACCTAGTGCGGTGGCTGTTACTTGTTCCGTCTTATTGTCTGACCTCTGAT
TCTTCACTTTCTCACCCAACATCTGGCCTCTATTGAACGAAGACTACTCC
CTGCTATTCGACTCAGATTTGCTAACTAAACCTTTTTTTTTTTTTTTTTT
TTTTCAGACCACATGGGGTAGCAGAGACGGTGCCGATGATTATGACGCGG
AGCGGATGAAGAAGCGAACGGACACGGATCGTATGAAACGGCCTTATTAC
CCGAGTTACATAACTCAATGAAGCCCACATGCGCGATGTGTGGACGTGTG
TTAAATTACTAAATGCCTTTGCTTTTACCTTGAGCCAACCTTATATCGTG
TCCGTGGCTAGCGACTGCTCGCACTCCAGGCGTGCTTGCCCTGCTGGTTA
CTGAAGCTCGCCTATGATATCCCAGCGACCTTCCAGCAATCGCTCTAAAC
TCTCGGTTGCACGATACACAATTACGACGAAATGCCTTGATGACGCTAAA
TTGGGAGCCATGAGATTAGGGTTCCCATGGCCTTCAGTTGATGTATAACT
TCTCTTTGCACAAATATTCTTATCTTTCCACTTGACTCTTTCCCGGAGGT
TTTGTGGACCGATCCTGTTGCACGCACGGTCCCGTTCAAAAAAAACATCT
TTTCTACGCTCAGATTGACTTCTCTTTCTAACATATCCCCTGTATCTGTC
CTTTTCTCGCTGGTTGATTGGTGGTTGTCGTTTGGGTCCGCAACACCAGT
ACCTGACACTCGTCGACCCGACCTTACCACTCCTGAACACACAAGTTATT
TCAAGGATTCTGGGTTCTGTAAATTATAAAAGCGTGGGCGGATTCTTCTT
TTATCCAAATTGGCATTGCTAATTAATGTGCTGTTTCCCTCACTGTCGCC
TGTATGTTCAGGTTTTCCTTCCCTTTTCATCATCTTTGCTTTTCCTACCG
CTAGACTCTGCATGTGGGAAAATTTGCCGGAGAGTTCCATTTTCATTATC
GATTTGGGTCTATTCTCCTTCGTACACTCTATGCATAATACCTAATGCTC
AATATGCCATCAAGAGAATCAATTTGGAACATGCTGTGCTTATGAAAAGG
GTGCGATGCGATGTATCGCCATTCCGGAAATTTCGCTTGTAGATAAGCGT
CGCCAGGCATCGTCGCACATAGTGCTGCAACTGATACTCATATGTATTAT
CTCTCTTTTCACTCCCTCCGTACCATAACTACCTTTGTTTGCCCTTGTAA
GAAGCAGGTGGACAGCAGAACCACCTCTATTCTGCTGTCTTCATCATCTA
TCGTTGCTTCGATGCAGCGACCAGCAAATATTGTATGTGGCGTGAACTGT
GG back to topCoding sequence (CDS) from alignment at ch7:1317752..1321753- >KJC3_009751-T1 ID=KJC3_009751-T1|Name=KJC3_009751-T1|organism=Aspergillus niger KJC3|type=CDS|length=5256bp|location=Sequence derived from alignment at ch7:1317752..1321753- (Aspergillus niger KJC3) ACCACATGGGGTAGCAGAGACGGTGCCGATGATTATGACGCGGAGCGGAT GAAGAAGCGAACGGACACGGATCGTATGAAACGGCCTTATTACCCGAGTT ACATAACTCAATGATCGCCAGCCTTGGAGCGCATACGCTGTCCACTTGAC GACGCTTTCGCCGCCAGCTCTCCTCGGCGATTTATTGCTCCTTATACTTT GTCACAAGGCTACGGTTTCTTGGGACAATGATACGCACGCGCTAGCTATG CAAGCTCTCGGACTGTGGATGTTTATAAGCAAGTTCATCAAACTTCTCGG ACATTACATCCGTTACCCGGTTGATGTTATCCTTTTGCCGGTGTCCATTC TCTTCGGCTATTTTCACGGGGCTATTAAAATATACGCCGTGCTAACTCTG AACGTGTTTATATCGCTACTTCCGCCTTGTTGTGAATCTCTTTTCTTTCT GGACGTTCAAACCAATTCCTCCGCCGGAAAATCCGAAGTTAACTGCCCAA GATGTAACGGTTATTTTACCAACGTTAGAGGGGTGTGGTGATGAACTCGT GGAAACCATAAGAACGATTCTCGACACCCAGCCTTATGAACTTCTTCTGG TCACCATTGAAGCGAATCGACAAAAGGCCGAGAATATGCTGAGCTTGATG CCCGCTTCGAAGTCAAGAATCCGCTTGTTCACCGTTACCCACCCCAACAA GCGCCGACAAATGACTAGAGCGATCCCGGAAGTCCGGACTACTATCACGG TATTCGCAGATGATGACGTGAGCTGGCCACGCACAGTCCTTCCTTGGATG CTAGCACCTTTTGAGAAGGATGAGCGATTCGGTGGTGTGGTAACTTGCCA ACGTCTACGACGGGCTGTTTCGCCATCATTTTCTCAACGCATATGGGGAT TTCTGGGCGCTCTTTACTTGGAACGAAGAAACTTCGATTGCGCGGCAACA ACGCATATTGACGGTGGGCTTCCCTGCATGTCAGGCCGGACAGTCGCATA CAGAACAGATATCCTTCAGAATGAAGGCTTCACGTATGGATTCACGAACG AGGAATGGTGGTTTGGGAAGTACCAATTGAACGCAGACGACGACAATTTC ATTACCCGCTGGATGGTGTCACATGGCTGGGAGACTTTCATGCAATATCA TCCTGAAGCGGAGGTCCTGACAACTCTGGAAGACAACCCCAAGTTTCTCA AACAGTGCGCGCGCTGGTCCCGAAGCAACTGGAGGAGCAACCTTACAAGC ATGTTCCATGAAAAACACATCTGGTAATGGAGTTTCCATTCTTGCGAGCA TTTATTGCCCTCTTACCACATGGGGTAGCAGAGACGGTGCCGATGATTAT GACGCGGAGCGGATGAAGAAGCGAACGGACACGGATCGTATGAAACGGCC TTATTACCCGAGTTACATAACTCAATGATCGCCAGCCTTGGAGCGCATAC GCTGTCCACTTGACGACGCTTTCGCCGCCAGCTCTCCTCGGCGATTTATT GCTCCTTATACTTTGTCACAAGGCTACGGTTTCTTGGGACAATGATACGC ACGCGCTAGCTATGCAAGCTCTCGGACTGTGGATGTTTATAAGCAAGTTC ATCAAACTTCTCGGACATTACATCCGTTACCCGGTTGATGTTATCCTTTT GCCGGTGTCCATTCTCTTCGGCTATTTTCACGGGGCTATTAAAATATACG CCGTGCTAACTCTGAACGTGTTTATATCGCTACTTCCGCCTTGTTGTGAA TCTCTTTTCTTTCTGGACGTTCAAACCAATTCCTCCGCCGGAAAATCCGA AGTTAACTGCCCAAGATGTAACGGTTATTTTACCAACGTTAGAGGGGTGT GGTGATGAACTCGTGGAAACCATAAGAACGATTCTCGACACCCAGCCTTA TGAACTTCTTCTGGTCACCATTGAAGCGAATCGACAAAAGGCCGAGAATA TGCTGAGCTTGATGCCCGCTTCGAAGTCAAGAATCCGCTTGTTCACCGTT ACCCACCCCAACAAGCGCCGACAAATGACTAGAGCGATCCCGGAAGTCCG GACTACTATCACGGTATTCGCAGATGATGACGTGAGCTGGCCACGCACAG TCCTTCCTTGGATGCTAGCACCTTTTGAGAAGGATGAGCGATTCGGTGGT GTGGTAACTTGCCAACGTCTACGACGGGCTGTTTCGCCATCATTTTCTCA ACGCATATGGGGATTTCTGGGCGCTCTTTACTTGGAACGAAGAAACTTCG ATTGCGCGGCAACAACGCATATTGACGGTGGGCTTCCCTGCATGTCAGGC CGGACAGTCGCATACAGAACAGATATCCTTCAGAATGAAGGCTTCACGTA TGGATTCACGAACGAGGAATGGTGGTTTGGGAAGTACCAATTGAACGCAG ACGACGACAATTTCATTACCCGCTGGATGGTGTCACATGGCTGGGAGACT TTCATGCAATATCATCCTGAAGCGGAGGTCCTGACAACTCTGGAAGACAA CCCCAAGTTTCTCAAACAGTGCGCGCGCTGGTCCCGAAGCAACTGGAGGA GCAACCTTACAAGCATGTTCCATGAAAAACACATCTGGTAATGGAGTTTC CATTCTTGCGAGCATTTATTGCCCTCTTACCACATGGGGTAGCAGAGACG GTGCCGATGATTATGACGCGGAGCGGATGAAGAAGCGAACGGACACGGAT CGTATGAAACGGCCTTATTACCCGAGTTACATAACTCAATGATCGCCAGC CTTGGAGCGCATACGCTGTCCACTTGACGACGCTTTCGCCGCCAGCTCTC CTCGGCGATTTATTGCTCCTTATACTTTGTCACAAGGCTACGGTTTCTTG GGACAATGATACGCACGCGCTAGCTATGCAAGCTCTCGGACTGTGGATGT TTATAAGCAAGTTCATCAAACTTCTCGGACATTACATCCGTTACCCGGTT GATGTTATCCTTTTGCCGGTGTCCATTCTCTTCGGCTATTTTCACGGGGC TATTAAAATATACGCCGTGCTAACTCTGAACGTGTTTATATCGCTACTTC CGCCTTGTTGTGAATCTCTTTTCTTTCTGGACGTTCAAACCAATTCCTCC GCCGGAAAATCCGAAGTTAACTGCCCAAGATGTAACGGTTATTTTACCAA CGTTAGAGGGGTGTGGTGATGAACTCGTGGAAACCATAAGAACGATTCTC GACACCCAGCCTTATGAACTTCTTCTGGTCACCATTGAAGCGAATCGACA AAAGGCCGAGAATATGCTGAGCTTGATGCCCGCTTCGAAGTCAAGAATCC GCTTGTTCACCGTTACCCACCCCAACAAGCGCCGACAAATGACTAGAGCG ATCCCGGAAGTCCGGACTACTATCACGGTATTCGCAGATGATGACGTGAG CTGGCCACGCACAGTCCTTCCTTGGATGCTAGCACCTTTTGAGAAGGATG AGCGATTCGGTGGTGTGGTAACTTGCCAACGTCTACGACGGGCTGTTTCG CCATCATTTTCTCAACGCATATGGGGATTTCTGGGCGCTCTTTACTTGGA ACGAAGAAACTTCGATTGCGCGGCAACAACGCATATTGACGGTGGGCTTC CCTGCATGTCAGGCCGGACAGTCGCATACAGAACAGATATCCTTCAGAAT GAAGGCTTCACGTATGGATTCACGAACGAGGAATGGTGGTTTGGGAAGTA CCAATTGAACGCAGACGACGACAATTTCATTACCCGCTGGATGGTGTCAC ATGGCTGGGAGACTTTCATGCAATATCATCCTGAAGCGGAGGTCCTGACA ACTCTGGAAGACAACCCCAAGTTTCTCAAACAGTGCGCGCGCTGGTCCCG AAGCAACTGGAGGAGCAACCTTACAAGCATGTTCCATGAAAAACACATCT GGTAATGGAGTTTCCATTCTTGCGAGCATTTATTGCCCTCTTACCACATG GGGTAGCAGAGACGGTGCCGATGATTATGACGCGGAGCGGATGAAGAAGC GAACGGACACGGATCGTATGAAACGGCCTTATTACCCGAGTTACATAACT CAATGATCGCCAGCCTTGGAGCGCATACGCTGTCCACTTGACGACGCTTT CGCCGCCAGCTCTCCTCGGCGATTTATTGCTCCTTATACTTTGTCACAAG GCTACGGTTTCTTGGGACAATGATACGCACGCGCTAGCTATGCAAGCTCT CGGACTGTGGATGTTTATAAGCAAGTTCATCAAACTTCTCGGACATTACA TCCGTTACCCGGTTGATGTTATCCTTTTGCCGGTGTCCATTCTCTTCGGC TATTTTCACGGGGCTATTAAAATATACGCCGTGCTAACTCTGAACGTGTT TATATCGCTACTTCCGCCTTGTTGTGAATCTCTTTTCTTTCTGGACGTTC AAACCAATTCCTCCGCCGGAAAATCCGAAGTTAACTGCCCAAGATGTAAC GGTTATTTTACCAACGTTAGAGGGGTGTGGTGATGAACTCGTGGAAACCA TAAGAACGATTCTCGACACCCAGCCTTATGAACTTCTTCTGGTCACCATT GAAGCGAATCGACAAAAGGCCGAGAATATGCTGAGCTTGATGCCCGCTTC GAAGTCAAGAATCCGCTTGTTCACCGTTACCCACCCCAACAAGCGCCGAC AAATGACTAGAGCGATCCCGGAAGTCCGGACTACTATCACGGTATTCGCA GATGATGACGTGAGCTGGCCACGCACAGTCCTTCCTTGGATGCTAGCACC TTTTGAGAAGGATGAGCGATTCGGTGGTGTGGTAACTTGCCAACGTCTAC GACGGGCTGTTTCGCCATCATTTTCTCAACGCATATGGGGATTTCTGGGC GCTCTTTACTTGGAACGAAGAAACTTCGATTGCGCGGCAACAACGCATAT TGACGGTGGGCTTCCCTGCATGTCAGGCCGGACAGTCGCATACAGAACAG ATATCCTTCAGAATGAAGGCTTCACGTATGGATTCACGAACGAGGAATGG TGGTTTGGGAAGTACCAATTGAACGCAGACGACGACAATTTCATTACCCG CTGGATGGTGTCACATGGCTGGGAGACTTTCATGCAATATCATCCTGAAG CGGAGGTCCTGACAACTCTGGAAGACAACCCCAAGTTTCTCAAACAGTGC GCGCGCTGGTCCCGAAGCAACTGGAGGAGCAACCTTACAAGCATGTTCCA TGAAAAACACATCTGGTAATGGAGTTTCCATTCTTGCGAGCATTTATTGC CCTCTT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_009751-T1.utr3p1 | KJC3_009751-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_009751-T1.utr5p1 | KJC3_009751-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
Property Name | Value |
Note | CAZy:GT2_Glyco_tranf_2_3 |
DBxref | InterPro:IPR029044 |
DBxref | PFAM:PF13506 |
DBxref | PFAM:PF13641 |
DBxref | PFAM:PF00535 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch7 | supercontig | ch7:1317752..1321753 - |
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