|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:2281975..2285495+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_010081-T1 ID=KJC3_010081-T1|Name=KJC3_010081-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3521bp|location=Sequence derived from alignment at ch7:2281975..2285495+ (Aspergillus niger KJC3)
GTGGGAAGCTCAGGCTCTATCGATCTATCCTCTGCATTAGTCTACATCAC
CATTACCCAGCATGGAGAAGCTGGTCCGCACACTTGTGCCTATCACTCTT
CACACCCAGTAAATCCCCCCATATCCCATATCCCAACTTTTCAGTCCTTC
TTTTCCACAAACTTTCCTTTTCCATCAAGTACGGAATACTTCCCCAATCC
CATTCCCCGGTCGGCTTCGGGCAGTATCCTCTGGTCCCAATTGTCTCCCG
CAAAGTGGTCAACGTCATCGTCATCCAATTCCTCCATTCTCTCGTTTAAA
AGTACCCTTCCTGCCCAGAGTGTTAAGTTAAAAAGATTTTCTAACCCGTC
CCAGGTAGCATTACGACCATCACTACGAGTAACTACTTTACTCTTCCTCC
AACTTAGCCCCCCCACCCCTGCTTCCATCACACTGGCAGCTTTCCACTCT
TCCCCCTCCATCAATCCCTGGAACGTTGGATGATCTGGATTGAGGCTGTG
CTGCTGCCTCCTCTTTTTGGTCCAAATCCCTCAGTCCTTGGTCCACCAGA
ATTCCCTCACCAACCAATTACCGTGGCCAGTGGAACGTCCGGAATCGTGA
TCACTGCTTAGCGACTCTTTCGACTACCACTAGAATCTGTACGGTTTGGA
GTACGTAGCCACCATCTCTTGGCCCCTGTACCTTGCAAAAACTCCCTTTC
TTTGGTTGATCCTTCACCCTGGGGTAAAAATCTCAACGTGTGCACGCGTC
GCACGGTTCTAGCCATTCCTTATCCGCCGTGTCCAAGCCTGCAAGGTGGC
TTGTGCTGTGATAATCCTTTGCTAAACGCAAGCAAAGTTCAGAGAAAGCC
TACCCACGCGACAAGCCACACCATCAGACTTGCTCCTCCATCCGATCACG
GGGGTGCTACATTGCCAATCGACTGTTCATTTCGATTAAGCCCCGTTTCC
AAGAGTCGACTGGAAAAGTTTAGATCAGAAGACCCAGTCGTTCATATCGC
TTATATCTCTCAACCCCCGTTTGTTGTGGTTCCAGATTGTCGCCACAGGA
CTTGACATTTCCCAATGGGTAAGTGTTAGAGAGAGAACCATCGTTCCTTA
GCACTCCTCATCCATGTTTCGAGTCCTGCTCCTACCTAATTCTTAATTCC
CGTTTCCCCACCTCCAGTTTCTTCACAGCTACGTTCCTCTTATTCAGGTA
TCACAGTCCTTCCATTCGTTCGCTTTTCTATCTCGCTTTTTGACCCTCTT
GCTTGCTATGATCGGCACGGCTTGTTGTCTCTTCACGCACACTTAGATCA
CTATACTCTTTGGCAGTATATCCGGTCGTTTATAAGCTTTTCACTTTCCC
CACTCCTTTGTTCGTTTAAACTGCTTTGTCGTGTCAACTCGCCTTCCTTT
CCTATTTGTTTTTCTGACAGCACCGTCCGCGGCGAATGACAACCGTTGCC
AGCCTTTGTCTCATCTTTTCACATCTACCCGCCTGGTCCTATTAGGTGCC
ACGCTCTGTAGACTGGGCTAACAAAATTCCCAACCTGCCTTTACAGCGAC
CAACAATATCTTCAAGTCATTTAGACGCTACTCCTGGGGCCCCAAACGGA
GAATGACGGGCTTATCATCAGAGAATGGTTCCACGGAGCCTGATGAGAGA
GCAGCATTGCTCGGTGACATTGCTCGCAGTAACTCCGGCCTCCGTCCGCG
ACAGCAGAAGCTTCACTGGTCTCACTGGCCTAGACGGGTGGCTCATTTGA
CTTGGTCGACTCTCGTTCGCGATTATGTCAATGTCCTGCTCATTTTTGTG
CCACTCGGTATCATCTCCGGTGCTCTCCATTGGGACAGTACTGTCATCTT
CACCTTGAACTTTCTCGCAATCATCCCTTTGGCCTCTCTTTTGAGCTTCG
CGACTGAAGAGCTGGCAGCTACTATGGGTCAAGCCCTGGGAGGCTTGATG
AATGCCACTTTCGGCAATGCGGTTGAGTTGATCGTATGTACATCTCTGAC
TTTTGTCTGAAGTCTAATGTGTTACAATGACCCGGCGCTGACAAGAATCG
CTACGGATAGGTCAGTATCATTGCTCTGAAAGACAACCAAATCCGCGTCG
TCCAAGCCAGTATGCTTGGTAGCATCCTGTCCAACATTCTGCTGGTCCTC
GGCTGCTGCTTCTTCGTCGGTGGTCTCAAGTACTCGCAGCAATCTTTCAA
CAGCACGGTAGCGTCGACAATGTCATCCCTGATGACTGTTTCATCTGCTT
CGCTGATCATTCCCGCCACCCTGTACGCCTCTTTGAGTGGCTCTAAAGAT
AAGGAGCAAAGACGTGACAACATTCTGATCCTCTCGCATGGAACTGCTAT
TATTCTTTTGGTTCTCTATGTGATGTACCTTTACTTTCAGCTCAAGTCGC
ATGCAGAGCTCTTCGAAGCAGCCAACGATGAGCTCAACGATACAGAGAAC
CAGGGTGGCGAAGTTGAAGAAGCCGAGGAGGAGGAGCATTTGCTCAGTCC
GTGGGCGGCCACTGTTGCATTGATTGTCATCACGGTCTTGGTTGCTATCT
GCGCCGACTATCTGGTTGGAAGTATTGACAGTATTGTGACGAAGACTGGA
ATGAGTCGCACGTTCATCGGTCTTGTTCTTATTCCCATTGTTGGAAATGC
CGCAGAGCATGTGACCGCTGTTGTTGTTGCTTGGAAAGGAAAAATGGACC
TTGCCATTGGCGTTGCCATCGGAAGCAGTCTTCAGATCGCTCTTTTTGTG
ACGCCATTCCTTGTCATTCTTGGATGGATCATGAATGTGGATATGACGCT
ACACTTCCATATCTTCGAGACAATGGCCTTTTTCATCTCTGGACTGGTTG
TGACATTCCTGATTCAGGACGGAAAGTCGAATTACCTCGAGGGTGGACTA
TGCTTGGGAATGTATGTTGCTCCTATACCGCTATATTGTCTCACTCACCT
TTGAGCTTTTATACTGACCCATCCCAGGTATCTAATTCTGGCAATTGCCT
TCTACATCTACCCAGACGATGTCAACGAAGATGCCCTATTCAACCACTAA
TATGTTGTTCAATGGGTTGGGCACCTTATTGAGCTGCTGCCTATCAGCCG
TCTCCGCTCACTATTCTCATTTTCAATCTGTACTCCTTCGTCGTCTCTCC
TTAATTCTGTTTAACTCGAAAATGCCGTTGTAAAAAGCGAGCTAGCTTCC
TCAGTGGGTTTTGTACAGACATGTCCAGTTGCCGTTTTGGGCATTTTTCA
CGTTCTACTATGGGAGGTGCTCTCTTTGTTTCAGTCAAGCTGCGGGCCAG
TACCAACGTATGCCGAATAGGCTACAATCCTGTATTTCAATAGGCTAAGA
GCCAGGTTTTCAAATGTCACCTTAACAACTTGAGTCTCTGCTGCGGACCG
AAAAACGAATTATTAGGGATCACGCCTTTGTCAGTAGCACCAACCTCAGC
TAGGACGGTTTGTCTGCTGTATGATTCAACTCTTAGTAAAACTCGTAAAT
AATTGTGTAGAAATCGTCACT back to topCoding sequence (CDS) from alignment at ch7:2281975..2285495+ >KJC3_010081-T1 ID=KJC3_010081-T1|Name=KJC3_010081-T1|organism=Aspergillus niger KJC3|type=CDS|length=5460bp|location=Sequence derived from alignment at ch7:2281975..2285495+ (Aspergillus niger KJC3)
ATGGCGACCAACAATATCTTCAAGTCATTTAGACGCTACTCCTGGGGCCC
CAAACGGAGAATGACGGGCTTATCATCAGAGAATGGTTCCACGGAGCCTG
ATGAGAGAGCAGCATTGCTCGGTGACATTGCTCGCAGTAACTCCGGCCTC
CGTCCGCGACAGCAGAAGCTTCACTGGTCTCACTGGCCTAGACGGGTGGC
TCATTTGACTTGGTCGACTCTCGTTCGCGATTATGTCAATGTCCTGCTCA
TTTTTGTGCCACTCGGTATCATCTCCGGTGCTCTCCATTGGGACAGTACT
GTCATCTTCACCTTGAACTTTCTCGCAATCATCCCTTTGGCCTCTCTTTT
GAGCTTCGCGACTGAAGAGCTGGCAGCTACTATGGGTCAAGCCCTGGGAG
GCTTGATGAATGCCACTTTCGGCAATGCGGTTGAGTTGATCGTCAGTATC
ATTGCTCTGAAAGACAACCAAATCCGCGTCGTCCAAGCCAGTATGCTTGG
TAGCATCCTGTCCAACATTCTGCTGGTCCTCGGCTGCTGCTTCTTCGTCG
GTGGTCTCAAGTACTCGCAGCAATCTTTCAACAGCACGGTAGCGTCGACA
ATGTCATCCCTGATGACTGTTTCATCTGCTTCGCTGATCATTCCCGCCAC
CCTGTACGCCTCTTTGAGTGGCTCTAAAGATAAGGAGCAAAGACGTGACA
ACATTCTGATCCTCTCGCATGGAACTGCTATTATTCTTTTGGTTCTCTAT
GTGATGTACCTTTACTTTCAGCTCAAGTCGCATGCAGAGCTCTTCGAAGC
AGCCAACGATGAGCTCAACGATACAGAGAACCAGGGTGGCGAAGTTGAAG
AAGCCGAGGAGGAGGAGCATTTGCTCAGTCCGTGGGCGGCCACTGTTGCA
TTGATTGTCATCACGGTCTTGGTTGCTATCTGCGCCGACTATCTGGTTGG
AAGTATTGACAGTATTGTGACGAAGACTGGAATGAGTCGCACGTTCATCG
GTCTTGTTCTTATTCCCATTGTTGGAAATGCCGCAGAGCATGTGACCGCT
GTTGTTGTTGCTTGGAAAGGAAAAATGGACCTTGCCATTGGCGTTGCCAT
CGGAAGCAGTCTTCAGATCGCTCTTTTTGTGACGCCATTCCTTGTCATTC
TTGGATGGATCATGAATGTGGATATGACGCTACACTTCCATATCTTCGAG
ACAATGGCCTTTTTCATCTCTGGACTGGTTGTGACATTCCTGATTCAGGA
CGGAAAGTCGAATTACCTCGAGGGTGGACTATGCTTGGGAATGTATCTAA
TTCTGGCAATTGCCTTCTACATCTACCCAGACGATGTCAACGAAGATGCC
CTATTCAACCACTAAATGGCGACCAACAATATCTTCAAGTCATTTAGACG
CTACTCCTGGGGCCCCAAACGGAGAATGACGGGCTTATCATCAGAGAATG
GTTCCACGGAGCCTGATGAGAGAGCAGCATTGCTCGGTGACATTGCTCGC
AGTAACTCCGGCCTCCGTCCGCGACAGCAGAAGCTTCACTGGTCTCACTG
GCCTAGACGGGTGGCTCATTTGACTTGGTCGACTCTCGTTCGCGATTATG
TCAATGTCCTGCTCATTTTTGTGCCACTCGGTATCATCTCCGGTGCTCTC
CATTGGGACAGTACTGTCATCTTCACCTTGAACTTTCTCGCAATCATCCC
TTTGGCCTCTCTTTTGAGCTTCGCGACTGAAGAGCTGGCAGCTACTATGG
GTCAAGCCCTGGGAGGCTTGATGAATGCCACTTTCGGCAATGCGGTTGAG
TTGATCGTCAGTATCATTGCTCTGAAAGACAACCAAATCCGCGTCGTCCA
AGCCAGTATGCTTGGTAGCATCCTGTCCAACATTCTGCTGGTCCTCGGCT
GCTGCTTCTTCGTCGGTGGTCTCAAGTACTCGCAGCAATCTTTCAACAGC
ACGGTAGCGTCGACAATGTCATCCCTGATGACTGTTTCATCTGCTTCGCT
GATCATTCCCGCCACCCTGTACGCCTCTTTGAGTGGCTCTAAAGATAAGG
AGCAAAGACGTGACAACATTCTGATCCTCTCGCATGGAACTGCTATTATT
CTTTTGGTTCTCTATGTGATGTACCTTTACTTTCAGCTCAAGTCGCATGC
AGAGCTCTTCGAAGCAGCCAACGATGAGCTCAACGATACAGAGAACCAGG
GTGGCGAAGTTGAAGAAGCCGAGGAGGAGGAGCATTTGCTCAGTCCGTGG
GCGGCCACTGTTGCATTGATTGTCATCACGGTCTTGGTTGCTATCTGCGC
CGACTATCTGGTTGGAAGTATTGACAGTATTGTGACGAAGACTGGAATGA
GTCGCACGTTCATCGGTCTTGTTCTTATTCCCATTGTTGGAAATGCCGCA
GAGCATGTGACCGCTGTTGTTGTTGCTTGGAAAGGAAAAATGGACCTTGC
CATTGGCGTTGCCATCGGAAGCAGTCTTCAGATCGCTCTTTTTGTGACGC
CATTCCTTGTCATTCTTGGATGGATCATGAATGTGGATATGACGCTACAC
TTCCATATCTTCGAGACAATGGCCTTTTTCATCTCTGGACTGGTTGTGAC
ATTCCTGATTCAGGACGGAAAGTCGAATTACCTCGAGGGTGGACTATGCT
TGGGAATGTATCTAATTCTGGCAATTGCCTTCTACATCTACCCAGACGAT
GTCAACGAAGATGCCCTATTCAACCACTAAATGGCGACCAACAATATCTT
CAAGTCATTTAGACGCTACTCCTGGGGCCCCAAACGGAGAATGACGGGCT
TATCATCAGAGAATGGTTCCACGGAGCCTGATGAGAGAGCAGCATTGCTC
GGTGACATTGCTCGCAGTAACTCCGGCCTCCGTCCGCGACAGCAGAAGCT
TCACTGGTCTCACTGGCCTAGACGGGTGGCTCATTTGACTTGGTCGACTC
TCGTTCGCGATTATGTCAATGTCCTGCTCATTTTTGTGCCACTCGGTATC
ATCTCCGGTGCTCTCCATTGGGACAGTACTGTCATCTTCACCTTGAACTT
TCTCGCAATCATCCCTTTGGCCTCTCTTTTGAGCTTCGCGACTGAAGAGC
TGGCAGCTACTATGGGTCAAGCCCTGGGAGGCTTGATGAATGCCACTTTC
GGCAATGCGGTTGAGTTGATCGTCAGTATCATTGCTCTGAAAGACAACCA
AATCCGCGTCGTCCAAGCCAGTATGCTTGGTAGCATCCTGTCCAACATTC
TGCTGGTCCTCGGCTGCTGCTTCTTCGTCGGTGGTCTCAAGTACTCGCAG
CAATCTTTCAACAGCACGGTAGCGTCGACAATGTCATCCCTGATGACTGT
TTCATCTGCTTCGCTGATCATTCCCGCCACCCTGTACGCCTCTTTGAGTG
GCTCTAAAGATAAGGAGCAAAGACGTGACAACATTCTGATCCTCTCGCAT
GGAACTGCTATTATTCTTTTGGTTCTCTATGTGATGTACCTTTACTTTCA
GCTCAAGTCGCATGCAGAGCTCTTCGAAGCAGCCAACGATGAGCTCAACG
ATACAGAGAACCAGGGTGGCGAAGTTGAAGAAGCCGAGGAGGAGGAGCAT
TTGCTCAGTCCGTGGGCGGCCACTGTTGCATTGATTGTCATCACGGTCTT
GGTTGCTATCTGCGCCGACTATCTGGTTGGAAGTATTGACAGTATTGTGA
CGAAGACTGGAATGAGTCGCACGTTCATCGGTCTTGTTCTTATTCCCATT
GTTGGAAATGCCGCAGAGCATGTGACCGCTGTTGTTGTTGCTTGGAAAGG
AAAAATGGACCTTGCCATTGGCGTTGCCATCGGAAGCAGTCTTCAGATCG
CTCTTTTTGTGACGCCATTCCTTGTCATTCTTGGATGGATCATGAATGTG
GATATGACGCTACACTTCCATATCTTCGAGACAATGGCCTTTTTCATCTC
TGGACTGGTTGTGACATTCCTGATTCAGGACGGAAAGTCGAATTACCTCG
AGGGTGGACTATGCTTGGGAATGTATCTAATTCTGGCAATTGCCTTCTAC
ATCTACCCAGACGATGTCAACGAAGATGCCCTATTCAACCACTAAATGGC
GACCAACAATATCTTCAAGTCATTTAGACGCTACTCCTGGGGCCCCAAAC
GGAGAATGACGGGCTTATCATCAGAGAATGGTTCCACGGAGCCTGATGAG
AGAGCAGCATTGCTCGGTGACATTGCTCGCAGTAACTCCGGCCTCCGTCC
GCGACAGCAGAAGCTTCACTGGTCTCACTGGCCTAGACGGGTGGCTCATT
TGACTTGGTCGACTCTCGTTCGCGATTATGTCAATGTCCTGCTCATTTTT
GTGCCACTCGGTATCATCTCCGGTGCTCTCCATTGGGACAGTACTGTCAT
CTTCACCTTGAACTTTCTCGCAATCATCCCTTTGGCCTCTCTTTTGAGCT
TCGCGACTGAAGAGCTGGCAGCTACTATGGGTCAAGCCCTGGGAGGCTTG
ATGAATGCCACTTTCGGCAATGCGGTTGAGTTGATCGTCAGTATCATTGC
TCTGAAAGACAACCAAATCCGCGTCGTCCAAGCCAGTATGCTTGGTAGCA
TCCTGTCCAACATTCTGCTGGTCCTCGGCTGCTGCTTCTTCGTCGGTGGT
CTCAAGTACTCGCAGCAATCTTTCAACAGCACGGTAGCGTCGACAATGTC
ATCCCTGATGACTGTTTCATCTGCTTCGCTGATCATTCCCGCCACCCTGT
ACGCCTCTTTGAGTGGCTCTAAAGATAAGGAGCAAAGACGTGACAACATT
CTGATCCTCTCGCATGGAACTGCTATTATTCTTTTGGTTCTCTATGTGAT
GTACCTTTACTTTCAGCTCAAGTCGCATGCAGAGCTCTTCGAAGCAGCCA
ACGATGAGCTCAACGATACAGAGAACCAGGGTGGCGAAGTTGAAGAAGCC
GAGGAGGAGGAGCATTTGCTCAGTCCGTGGGCGGCCACTGTTGCATTGAT
TGTCATCACGGTCTTGGTTGCTATCTGCGCCGACTATCTGGTTGGAAGTA
TTGACAGTATTGTGACGAAGACTGGAATGAGTCGCACGTTCATCGGTCTT
GTTCTTATTCCCATTGTTGGAAATGCCGCAGAGCATGTGACCGCTGTTGT
TGTTGCTTGGAAAGGAAAAATGGACCTTGCCATTGGCGTTGCCATCGGAA
GCAGTCTTCAGATCGCTCTTTTTGTGACGCCATTCCTTGTCATTCTTGGA
TGGATCATGAATGTGGATATGACGCTACACTTCCATATCTTCGAGACAAT
GGCCTTTTTCATCTCTGGACTGGTTGTGACATTCCTGATTCAGGACGGAA
AGTCGAATTACCTCGAGGGTGGACTATGCTTGGGAATGTATCTAATTCTG
GCAATTGCCTTCTACATCTACCCAGACGATGTCAACGAAGATGCCCTATT
CAACCACTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006816 | calcium ion transport |
| GO:0006812 | cation transport |
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0015369 | calcium:proton antiporter activity |
| GO:0008324 | cation transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_010081-T1.utr3p1 | KJC3_010081-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR004798 |
| DBxref | InterPro:IPR004837 |
| DBxref | InterPro:IPR004713 |
| DBxref | PFAM:PF01699 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:2281975..2285495 + |
|
