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KJC3_013104-T1, KJC3_013104-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_013104-T1
Unique NameKJC3_013104-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:2865762..2867661+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_013104-T1 ID=KJC3_013104-T1|Name=KJC3_013104-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1900bp|location=Sequence derived from alignment at ch7:2865762..2867661+ (Aspergillus niger KJC3)
CAATCCCCCTCACAGGTTATACATACTATATTCTAACGCACCTCAGACGA
CCCGACAGTCAAGATGAGGGCCAAGCGATCCAAGAAGTACCGCAAGCTCA
TGCACCAGTATGAGCTTACGTTTGGGTTCCGTGAGCCGTATCAGGTTCTG
GGTATGCAGACATCCATTCAACCAATCACTCATACTATCATGTCCAGGAT
AAGGGTATACTAACTAATATATGTGACAGTTGACTCTAATTTCCTCCGCG
CCGTCCACTCCTTCAAAATGGACTTGATCCCCGCTCTGGAGCGCACTCTT
CAAGGCAAACCCAAGCCTCGTATGTTGCCCCGGATATCAACTTTCGACTG
CAATCAGTACAGTATACTAACAAATTGGATCAGTCCTCACAAAATGCTCC
CTCGCCGCAATCATGGCCTCCCAACCCATCAACCCCAGGACCAACAACCC
CTACCGACCCGACCACCTCCCCCCACCCACCACCCTTCCTCTCCGCCACT
GCTCCCACAACGCTGACTCGACCCCCATCGACGAAGTCGAGTGCCTCCTC
TCTCTCCTCTCGCCCTCCGCGGAGAGCAAAAAGAACAAGGAACATTACAT
CCTCGCGACGGCGGACCCGCACAACGCCAAGGACAAGTCCGCGACGGATA
ACACAGCCGCCGGTCGGAAACGGAAGCGCGACGCAGAGGACAAGGCTGAG
GCGGCGTTACGGAAGTCGAGGTTGCTACGGCGCCAGGCTCGGTCGATTCC
AGGTGTGCCGATTGTCTATGTGAAGAGGTCGGTGATGGTGTTGGAGCCGA
TGAGTGATCCTTCGGATGCGATCAGAGAGGGTGTGGAGAAGGGCAAGTTT
AGGGTTGGGTTGAATGATGAAGCGAGAAAGCCGACGACGGCTGGGGACGG
GGAGAAGACGAAGAAGAAGAGGGATTTGAAGAAGCCCAAGGGACCGAATC
CGCTGAGTGTGAAGAAGCCGAAGAAGAGGGCGCCGGAAGATACTCCCGGG
AAGGCGGAGAAGCCGAAGAGAGAGGCTGAGGAGAGACCTGCTGCGGAGGA
GCGGGATGGAGAGGATGGAGATGCTGCGCCGAAGGCGAAGCGCAGACGTC
GTCATCATAATCGCGGTGCTGGGAAGACGGATGGTGATGAGGGTGGTGCG
CAGGAGGCTGCCGCGCCGGCCGATGCCATGGATGATTGATTGTTTTGCTA
GGGGCTACTTTTTTTTTTATTTGACTTCCATGGTACGGCGTTCGGCGGAC
GAGATAAAAAAGTGTCCATATGTATTGTGTATAGGTAGTTATCATCGATA
TTGATAGACGATTCCAACATCTAACATACCCATCCCAACACAACACAACA
CAGCCCAAACAAGCATAAACATACACCGTCAAAGAAGCAGCATAAGAAGA
GAGAGATATGATATAGTATAATAATCCCGAACGCCAATCAATGTAAGTAA
CCCACATGCACCCAGCCCATCAGACACATACATCAACATATCATACACCC
CCCACCGCCACCAAGCACAACCACAAATACATACACCCATTTATTTCTCC
GCCGCACTTGAACCCGAAGAAGTCGAAGCAGAAGAAGCCAACGAAGAAAT
CGACCCCGTCTCCGCAAGCGCCTTCTCTTCAGCCCAAATACGCTCAATCT
TCTTGCGCTTCTCCTTCGCCTCATCCCGGTTGCGCTTAGCGCGCGCATAC
CGCTCCGCCGCTAGACATTTGTTCACGTCGCGCTTGACATCGTTGCATCC
GCCCAGAGCTTTGTGAATGAAGCCTCGTGCGTGGCATTCGTCGAGGGCGG
TCATGATTTCTTCGCAGTCTGTTGAGAGAGAAAGTTAGTTGAGTGCTTAG
TATGGTATGATGTGATATGATGTTAGTGGTGGAGAGATTTTGGAGGGGGG
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Coding sequence (CDS) from alignment at ch7:2865762..2867661+

>KJC3_013104-T1 ID=KJC3_013104-T1|Name=KJC3_013104-T1|organism=Aspergillus niger KJC3|type=CDS|length=2952bp|location=Sequence derived from alignment at ch7:2865762..2867661+ (Aspergillus niger KJC3)
ATGAGGGCCAAGCGATCCAAGAAGTACCGCAAGCTCATGCACCAGTATGA
GCTTACGTTTGGGTTCCGTGAGCCGTATCAGGTTCTGGTTGACTCTAATT
TCCTCCGCGCCGTCCACTCCTTCAAAATGGACTTGATCCCCGCTCTGGAG
CGCACTCTTCAAGGCAAACCCAAGCCTCTCCTCACAAAATGCTCCCTCGC
CGCAATCATGGCCTCCCAACCCATCAACCCCAGGACCAACAACCCCTACC
GACCCGACCACCTCCCCCCACCCACCACCCTTCCTCTCCGCCACTGCTCC
CACAACGCTGACTCGACCCCCATCGACGAAGTCGAGTGCCTCCTCTCTCT
CCTCTCGCCCTCCGCGGAGAGCAAAAAGAACAAGGAACATTACATCCTCG
CGACGGCGGACCCGCACAACGCCAAGGACAAGTCCGCGACGGATAACACA
GCCGCCGGTCGGAAACGGAAGCGCGACGCAGAGGACAAGGCTGAGGCGGC
GTTACGGAAGTCGAGGTTGCTACGGCGCCAGGCTCGGTCGATTCCAGGTG
TGCCGATTGTCTATGTGAAGAGGTCGGTGATGGTGTTGGAGCCGATGAGT
GATCCTTCGGATGCGATCAGAGAGGGTGTGGAGAAGGGCAAGTTTAGGGT
TGGGTTGAATGATGAAGCGAGAAAGCCGACGACGGCTGGGGACGGGGAGA
AGACGAAGAAGAAGAGGGATTTGAAGAAGCCCAAGGGACCGAATCCGCTG
AGTGTGAAGAAGCCGAAGAAGAGGGCGCCGGAAGATACTCCCGGGAAGGC
GGAGAAGCCGAAGAGAGAGGCTGAGGAGAGACCTGCTGCGGAGGAGCGGG
ATGGAGAGGATGGAGATGCTGCGCCGAAGGCGAAGCGCAGACGTCGTCAT
CATAATCGCGGTGCTGGGAAGACGGATGGTGATGAGGGTGGTGCGCAGGA
GGCTGCCGCGCCGGCCGATGCCATGGATGATTGAATGAGGGCCAAGCGAT
CCAAGAAGTACCGCAAGCTCATGCACCAGTATGAGCTTACGTTTGGGTTC
CGTGAGCCGTATCAGGTTCTGGTTGACTCTAATTTCCTCCGCGCCGTCCA
CTCCTTCAAAATGGACTTGATCCCCGCTCTGGAGCGCACTCTTCAAGGCA
AACCCAAGCCTCTCCTCACAAAATGCTCCCTCGCCGCAATCATGGCCTCC
CAACCCATCAACCCCAGGACCAACAACCCCTACCGACCCGACCACCTCCC
CCCACCCACCACCCTTCCTCTCCGCCACTGCTCCCACAACGCTGACTCGA
CCCCCATCGACGAAGTCGAGTGCCTCCTCTCTCTCCTCTCGCCCTCCGCG
GAGAGCAAAAAGAACAAGGAACATTACATCCTCGCGACGGCGGACCCGCA
CAACGCCAAGGACAAGTCCGCGACGGATAACACAGCCGCCGGTCGGAAAC
GGAAGCGCGACGCAGAGGACAAGGCTGAGGCGGCGTTACGGAAGTCGAGG
TTGCTACGGCGCCAGGCTCGGTCGATTCCAGGTGTGCCGATTGTCTATGT
GAAGAGGTCGGTGATGGTGTTGGAGCCGATGAGTGATCCTTCGGATGCGA
TCAGAGAGGGTGTGGAGAAGGGCAAGTTTAGGGTTGGGTTGAATGATGAA
GCGAGAAAGCCGACGACGGCTGGGGACGGGGAGAAGACGAAGAAGAAGAG
GGATTTGAAGAAGCCCAAGGGACCGAATCCGCTGAGTGTGAAGAAGCCGA
AGAAGAGGGCGCCGGAAGATACTCCCGGGAAGGCGGAGAAGCCGAAGAGA
GAGGCTGAGGAGAGACCTGCTGCGGAGGAGCGGGATGGAGAGGATGGAGA
TGCTGCGCCGAAGGCGAAGCGCAGACGTCGTCATCATAATCGCGGTGCTG
GGAAGACGGATGGTGATGAGGGTGGTGCGCAGGAGGCTGCCGCGCCGGCC
GATGCCATGGATGATTGAATGAGGGCCAAGCGATCCAAGAAGTACCGCAA
GCTCATGCACCAGTATGAGCTTACGTTTGGGTTCCGTGAGCCGTATCAGG
TTCTGGTTGACTCTAATTTCCTCCGCGCCGTCCACTCCTTCAAAATGGAC
TTGATCCCCGCTCTGGAGCGCACTCTTCAAGGCAAACCCAAGCCTCTCCT
CACAAAATGCTCCCTCGCCGCAATCATGGCCTCCCAACCCATCAACCCCA
GGACCAACAACCCCTACCGACCCGACCACCTCCCCCCACCCACCACCCTT
CCTCTCCGCCACTGCTCCCACAACGCTGACTCGACCCCCATCGACGAAGT
CGAGTGCCTCCTCTCTCTCCTCTCGCCCTCCGCGGAGAGCAAAAAGAACA
AGGAACATTACATCCTCGCGACGGCGGACCCGCACAACGCCAAGGACAAG
TCCGCGACGGATAACACAGCCGCCGGTCGGAAACGGAAGCGCGACGCAGA
GGACAAGGCTGAGGCGGCGTTACGGAAGTCGAGGTTGCTACGGCGCCAGG
CTCGGTCGATTCCAGGTGTGCCGATTGTCTATGTGAAGAGGTCGGTGATG
GTGTTGGAGCCGATGAGTGATCCTTCGGATGCGATCAGAGAGGGTGTGGA
GAAGGGCAAGTTTAGGGTTGGGTTGAATGATGAAGCGAGAAAGCCGACGA
CGGCTGGGGACGGGGAGAAGACGAAGAAGAAGAGGGATTTGAAGAAGCCC
AAGGGACCGAATCCGCTGAGTGTGAAGAAGCCGAAGAAGAGGGCGCCGGA
AGATACTCCCGGGAAGGCGGAGAAGCCGAAGAGAGAGGCTGAGGAGAGAC
CTGCTGCGGAGGAGCGGGATGGAGAGGATGGAGATGCTGCGCCGAAGGCG
AAGCGCAGACGTCGTCATCATAATCGCGGTGCTGGGAAGACGGATGGTGA
TGAGGGTGGTGCGCAGGAGGCTGCCGCGCCGGCCGATGCCATGGATGATT
GA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0032040small-subunit processome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_013104KJC3_013104Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013104-T1KJC3_013104-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013104-T1.utr5p1KJC3_013104-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013104-T1.exon1KJC3_013104-T1.exon1Aspergillus niger KJC3exon
KJC3_013104-T1.exon2KJC3_013104-T1.exon2Aspergillus niger KJC3exon
KJC3_013104-T1.exon3KJC3_013104-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013104-T1.cdsKJC3_013104-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_013104-T1.utr3p1KJC3_013104-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR006984
DBxrefPFAM:PF04900
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:2865762..2867661 +
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