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KJC3_010544-T1, KJC3_010544-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010544-T1
Unique NameKJC3_010544-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:3693364..3694605+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010544-T1 ID=KJC3_010544-T1|Name=KJC3_010544-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1242bp|location=Sequence derived from alignment at ch7:3693364..3694605+ (Aspergillus niger KJC3)
CCCTGACACAATTGACCTTTAACCTTGAATAAACACTCTACAGCAACTTA
TCGGGCTTACATGCTTATAGTGTGAGATCCATCTTTGTCGAGTCTACATT
ATTAGTAGTACAATTCTCATATACGGCCAACGGCGCATGTACATCACCCG
AAAGCCGGAACATTCCTCTTGAGGTCGTCCCCAATCGTCATGTACGGCGA
ACACGGAAACAAGCTCGTATGTGCTTTTCTAATGAGCCATGCTTTATGAA
TAACCCGTCCTGACGAAACCCACAAACAGGTTCAACATGCCAAGCGCACT
CAAGCTCTCACCCATCTCCCTCCCTACCAAACCGAATTGGTCCGTTCCGT
AGCCCGCGAAGTACGCGACCTCGACCGTGATGTCGCACACCTCCTCGGTC
CATTCGAAGGCAGTTTCAATCCGTCACAAGAACCAGCCGTTGCCTGTGCC
CTCTTAGTGGATCATCTCTGCATGCGCCGCAACAAACGATGTCTTCTTGC
CTACCACCGTGTCCGCGCTGAAAAGCTCGAGGAGCTATGCTGGAGCGGCG
TTGATTTGCTCGAACAGCAGCTACCGACGGCAGACGAAGGGGCTGCAGGT
GCATCAGGCCAGGGGAACGGGGGATATGCAGCGATGGGCACTGCGAGTGG
GAACCACAGTTCGTTGAGTCCGGAAGAAGAAGAATACTTCCGACAATATA
GCGATCTTCTGGCGGCGTATAAGGGACAGTGGACAGATATTGATCTTACG
GGAAGCCTGGAGCCCCCGAAGGATCTCTTCATAGACGTGAGAGTCTTGAA
GGATGCGGGGGAGATTCAGACTGAGTATGGGTATGTGAGGCATTTTCTAT
ATTTTCCCTCGCGCGTATTGTTGATCGGCAGGTTGGAATGCTGACATTGC
ATATAGGGTGATCAATTTGACGAAAAACAGTCAACTCTACGTGCGGCAAG
GGGATGTGGAACGATTAATCGCGCAGGGGTTTCTAGAGCGTCTGAGTTGA
TGGAGGATGATGAGTTTCAGATCATGCAATTTATGTCTTATGATACCCCA
ATGATTGATGCCTCTGAACGGAGTATAGTAAAGGACGGTCTAGCTAGGAT
ATGCTGTGTAGCGTTGTTTTCTTTTTTTTCAATGATCCATTTTTTCGTCG
TTGTGTTCAAAAATCGGACCAAAACTGCATACGTGTGGCGCATTAGCAGA
AGCTATTATCGTATTGATTACGTAGAGTAATTTATATATCAC
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Coding sequence (CDS) from alignment at ch7:3693364..3694605+

>KJC3_010544-T1 ID=KJC3_010544-T1|Name=KJC3_010544-T1|organism=Aspergillus niger KJC3|type=CDS|length=2016bp|location=Sequence derived from alignment at ch7:3693364..3694605+ (Aspergillus niger KJC3)
ATGTACGGCGAACACGGAAACAAGCTCGTTCAACATGCCAAGCGCACTCA
AGCTCTCACCCATCTCCCTCCCTACCAAACCGAATTGGTCCGTTCCGTAG
CCCGCGAAGTACGCGACCTCGACCGTGATGTCGCACACCTCCTCGGTCCA
TTCGAAGGCAGTTTCAATCCGTCACAAGAACCAGCCGTTGCCTGTGCCCT
CTTAGTGGATCATCTCTGCATGCGCCGCAACAAACGATGTCTTCTTGCCT
ACCACCGTGTCCGCGCTGAAAAGCTCGAGGAGCTATGCTGGAGCGGCGTT
GATTTGCTCGAACAGCAGCTACCGACGGCAGACGAAGGGGCTGCAGGTGC
ATCAGGCCAGGGGAACGGGGGATATGCAGCGATGGGCACTGCGAGTGGGA
ACCACAGTTCGTTGAGTCCGGAAGAAGAAGAATACTTCCGACAATATAGC
GATCTTCTGGCGGCGTATAAGGGACAGTGGACAGATATTGATCTTACGGG
AAGCCTGGAGCCCCCGAAGGATCTCTTCATAGACGTGAGAGTCTTGAAGG
ATGCGGGGGAGATTCAGACTGAGTATGGGGTGATCAATTTGACGAAAAAC
AGTCAACTCTACGTGCGGCAAGGGGATGTGGAACGATTAATCGCGCAGGG
GTTTCTAGAGCGTCTGAGTTGAATGTACGGCGAACACGGAAACAAGCTCG
TTCAACATGCCAAGCGCACTCAAGCTCTCACCCATCTCCCTCCCTACCAA
ACCGAATTGGTCCGTTCCGTAGCCCGCGAAGTACGCGACCTCGACCGTGA
TGTCGCACACCTCCTCGGTCCATTCGAAGGCAGTTTCAATCCGTCACAAG
AACCAGCCGTTGCCTGTGCCCTCTTAGTGGATCATCTCTGCATGCGCCGC
AACAAACGATGTCTTCTTGCCTACCACCGTGTCCGCGCTGAAAAGCTCGA
GGAGCTATGCTGGAGCGGCGTTGATTTGCTCGAACAGCAGCTACCGACGG
CAGACGAAGGGGCTGCAGGTGCATCAGGCCAGGGGAACGGGGGATATGCA
GCGATGGGCACTGCGAGTGGGAACCACAGTTCGTTGAGTCCGGAAGAAGA
AGAATACTTCCGACAATATAGCGATCTTCTGGCGGCGTATAAGGGACAGT
GGACAGATATTGATCTTACGGGAAGCCTGGAGCCCCCGAAGGATCTCTTC
ATAGACGTGAGAGTCTTGAAGGATGCGGGGGAGATTCAGACTGAGTATGG
GGTGATCAATTTGACGAAAAACAGTCAACTCTACGTGCGGCAAGGGGATG
TGGAACGATTAATCGCGCAGGGGTTTCTAGAGCGTCTGAGTTGAATGTAC
GGCGAACACGGAAACAAGCTCGTTCAACATGCCAAGCGCACTCAAGCTCT
CACCCATCTCCCTCCCTACCAAACCGAATTGGTCCGTTCCGTAGCCCGCG
AAGTACGCGACCTCGACCGTGATGTCGCACACCTCCTCGGTCCATTCGAA
GGCAGTTTCAATCCGTCACAAGAACCAGCCGTTGCCTGTGCCCTCTTAGT
GGATCATCTCTGCATGCGCCGCAACAAACGATGTCTTCTTGCCTACCACC
GTGTCCGCGCTGAAAAGCTCGAGGAGCTATGCTGGAGCGGCGTTGATTTG
CTCGAACAGCAGCTACCGACGGCAGACGAAGGGGCTGCAGGTGCATCAGG
CCAGGGGAACGGGGGATATGCAGCGATGGGCACTGCGAGTGGGAACCACA
GTTCGTTGAGTCCGGAAGAAGAAGAATACTTCCGACAATATAGCGATCTT
CTGGCGGCGTATAAGGGACAGTGGACAGATATTGATCTTACGGGAAGCCT
GGAGCCCCCGAAGGATCTCTTCATAGACGTGAGAGTCTTGAAGGATGCGG
GGGAGATTCAGACTGAGTATGGGGTGATCAATTTGACGAAAAACAGTCAA
CTCTACGTGCGGCAAGGGGATGTGGAACGATTAATCGCGCAGGGGTTTCT
AGAGCGTCTGAGTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000811GINS complex
Vocabulary: Biological Process
TermDefinition
GO:0006260DNA replication
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PSF1_1KJC3_010544Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010544-T1KJC3_010544-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010544-T1.utr5p1KJC3_010544-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010544-T1.exon1KJC3_010544-T1.exon1Aspergillus niger KJC3exon
KJC3_010544-T1.exon2KJC3_010544-T1.exon2Aspergillus niger KJC3exon
KJC3_010544-T1.exon3KJC3_010544-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010544-T1.cdsKJC3_010544-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010544-T1.utr3p1KJC3_010544-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG092648K5
DBxrefInterPro:IPR036224
DBxrefInterPro:IPR005339
DBxrefInterPro:IPR021151
DBxrefPFAM:PF05916
ProductDNA replication protein psf1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:3693364..3694605 +
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