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KJC3_010544-T2, KJC3_010544-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_010544-T2
Unique NameKJC3_010544-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:3693364..3694605+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_010544-T2 ID=KJC3_010544-T2|Name=KJC3_010544-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1242bp|location=Sequence derived from alignment at ch7:3693364..3694605+ (Aspergillus niger KJC3)
CCCTGACACAATTGACCTTTAACCTTGAATAAACACTCTACAGCAACTTA
TCGGGCTTACATGCTTATAGTGTGAGATCCATCTTTGTCGAGTCTACATT
ATTAGTAGTACAATTCTCATATACGGCCAACGGCGCATGTACATCACCCG
AAAGCCGGAACATTCCTCTTGAGGTCGTCCCCAATCGTCATGTACGGCGA
ACACGGAAACAAGCTCGTATGTGCTTTTCTAATGAGCCATGCTTTATGAA
TAACCCGTCCTGACGAAACCCACAAACAGGTTCAACATGCCAAGCGCACT
CAAGCTCTCACCCATCTCCCTCCCTACCAAACCGAATTGGTCCGTTCCGT
AGCCCGCGAAGTACGCGACCTCGACCGTGATGTCGCACACCTCCTCGGTC
CATTCGAAGGCAGTTTCAATCCGTCACAAGAACCAGCCGTTGCCTGTGCC
CTCTTAGTGGATCATCTCTGCATGCGCCGCAACAAACGATGTCTTCTTGC
CTACCACCGTGTCCGCGCTGAAAAGCTCGAGGAGCTATGCTGGAGCGGCG
TTGATTTGCTCGAACAGCAGCTACCGACGGCAGACGAAGGGGCTGCAGGT
GCATCAGGCCAGGGGAACGGGGGATATGCAGCGATGGGCACTGCGAGTGG
GAACCACAGTTCGTTGAGTCCGGAAGAAGAAGAATACTTCCGACAATATA
GCGATCTTCTGGCGGCGTATAAGGGACAGTGGACAGATATTGATCTTACG
GGAAGCCTGGAGCCCCCGAAGGATCTCTTCATAGACGTGAGAGTCTTGAA
GGATGCGGGGGAGATTCAGACTGAGTATGGGTATGTGAGGCATTTTCTAT
ATTTTCCCTCGCGCGTATTGTTGATCGGCAGGTTGGAATGCTGACATTGC
ATATAGGGTGATCAATTTGACGAAAAACAGTCAACTCTACGTGCGGCAAG
GGGATGTGGAACGATTAATCGCGCAGGGGTTTCTAGAGCGTCTGAGTTGA
TGGAGGATGATGAGTTTCAGATCATGCAATTTATGTCTTATGATACCCCA
ATGATTGATGCCTCTGAACGGAGTATAGTAAAGGACGGTCTAGCTAGGAT
ATGCTGTGTAGCGTTGTTTTCTTTTTTTTCAATGATCCATTTTTTCGTCG
TTGTGTTCAAAAATCGGACCAAAACTGCATACGTGTGGCGCATTAGCAGA
AGCTATTATCGTATTGATTACGTAGAGTAATTTATATATCAC
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Coding sequence (CDS) from alignment at ch7:3693364..3694605+

>KJC3_010544-T2 ID=KJC3_010544-T2|Name=KJC3_010544-T2|organism=Aspergillus niger KJC3|type=CDS|length=1284bp|location=Sequence derived from alignment at ch7:3693364..3694605+ (Aspergillus niger KJC3)
ATGTACGGCGAACACGGAAACAAGCTCGTTCAACATGCCAAGCGCACTCA
AGCTCTCACCCATCTCCCTCCCTACCAAACCGAATTGGTCCGTTCCGTAG
CCCGCGAAGTACGCGACCTCGACCGTGATGTCGCACACCTCCTCGGTCCA
TTCGAAGGCAGTTTCAATCCGTCACAAGAACCAGCCGTTGCCTGTGCCCT
CTTAGTGGATCATCTCTGCATGCGCCGCAACAAACGATGTCTTCTTGCCT
ACCACCGTGTCCGCGCTGAAAAGCTCGAGGAGCTATGCTGGAGCGGCGTT
GATTTGCTCGAACAGCAGCTACCGACGGCAGACGAAGGGGCTGCAGGTGC
ATCAGGCCAGGGGAACGGGGGATATGCAGCGATGGGCACTGCGAGTGGGA
ACCACAGTTCGTTGAGTCCGGAAGAAGAAGAATACTTCCGACAATATAGC
GATCTTCTGGCGGCGTATAAGGGACAGTGGACAGATATTGATCTTACGGG
AAGCCTGGAGCCCCCGAAGGATCTCTTCATAGACGTGAGAGTCTTGAAGG
ATGCGGGGGAGATTCAGACTGAGTATGGGTATGTGAGGCATTTTCTATAT
TTTCCCTCGCGCGTATTGTTGATCGGCAGGTTGGAATGCTGAATGTACGG
CGAACACGGAAACAAGCTCGTTCAACATGCCAAGCGCACTCAAGCTCTCA
CCCATCTCCCTCCCTACCAAACCGAATTGGTCCGTTCCGTAGCCCGCGAA
GTACGCGACCTCGACCGTGATGTCGCACACCTCCTCGGTCCATTCGAAGG
CAGTTTCAATCCGTCACAAGAACCAGCCGTTGCCTGTGCCCTCTTAGTGG
ATCATCTCTGCATGCGCCGCAACAAACGATGTCTTCTTGCCTACCACCGT
GTCCGCGCTGAAAAGCTCGAGGAGCTATGCTGGAGCGGCGTTGATTTGCT
CGAACAGCAGCTACCGACGGCAGACGAAGGGGCTGCAGGTGCATCAGGCC
AGGGGAACGGGGGATATGCAGCGATGGGCACTGCGAGTGGGAACCACAGT
TCGTTGAGTCCGGAAGAAGAAGAATACTTCCGACAATATAGCGATCTTCT
GGCGGCGTATAAGGGACAGTGGACAGATATTGATCTTACGGGAAGCCTGG
AGCCCCCGAAGGATCTCTTCATAGACGTGAGAGTCTTGAAGGATGCGGGG
GAGATTCAGACTGAGTATGGGTATGTGAGGCATTTTCTATATTTTCCCTC
GCGCGTATTGTTGATCGGCAGGTTGGAATGCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000811GINS complex
Vocabulary: Biological Process
TermDefinition
GO:0006260DNA replication
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PSF1_1KJC3_010544Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010544-T2.utr5p1KJC3_010544-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010544-T2.exon1KJC3_010544-T2.exon1Aspergillus niger KJC3exon
KJC3_010544-T2.exon2KJC3_010544-T2.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010544-T2.cdsKJC3_010544-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010544-T2.utr3p1KJC3_010544-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_010544-T2KJC3_010544-T2-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG092648K5
DBxrefInterPro:IPR036224
DBxrefInterPro:IPR005339
DBxrefInterPro:IPR021151
DBxrefPFAM:PF05916
Product variant 2
ProductDNA replication protein psf1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:3693364..3694605 +
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