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KJC3_011009-T1, KJC3_011009-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011009-T1
Unique NameKJC3_011009-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch7:4955240..4956457-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011009-T1 ID=KJC3_011009-T1|Name=KJC3_011009-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1218bp|location=Sequence derived from alignment at ch7:4955240..4956457- (Aspergillus niger KJC3)
ATGTCGAGGCAGCCTAAACTGCGACCCAAATCGCATATCCCAGGCTTCCC
AGACGCCATCTACAATCTTGCTGCAGTATCATCTTTATCGCAACTTGAGT
CTCGCGCAGGACTGGGAGATGACAAGCATGACCAGCGCGTCTTTCGTGTC
AAACGCAAGCATGTGCTGAAGGCTTGCGATCGTTGCAGAGTTAAGAAGAC
CAAGGTTGGTGAAGTACTGGGCTCTTCTTTGTCATCTTTCACCTCTACCC
TGGCCTCAGCGCACTATATCGTTGGCCAGCCATGCTCATTCATGTTAGTG
TGATGGGAAACAGCCGTGCAATCGTTGTTCGGCCTACAATCATCCGTGTC
TGTTCCGGGAACGGAAGGCCACACAGACCAAAGTATACTCTCGAGGGTAA
GGTCCTGATTTCTATTCTACATTGTCTTAGTGTGCTCTCCCTTTATGGAC
TGACAAAACTGACGGGTCTCTGTGAGTGTGAATAGATTCGTTGAAATGCT
GGAATCACACCATTCGCTGGTTGTCAAGGCGCTCCAAAGGCTATACAAAC
TGTGCATTGACAAGGAAGGATTTCCCGGCGAGCCTCTCGTCGAGCTCTCG
GACGGTCAGCCTCTAACTCATGCCATCCTGGACCGTCTCGGATTGATCAA
ACAGGCCGAAGAGAATCCAGAGGAGCCCGAGGAGGATACTGAAGACCTGC
GGTATTTGCGGTTCCTGTCTACCTCGACGGACTGCAGTGCTACGACGGAT
CCCTCACCAGAACCGGCCACTCCTCCGGATCCTACTCCCAGTAGTTGCAG
TCCTATCACTCCTACTTCCTCCAAGGGGCCAGAGCCTTGGAAATGGGAGT
TGCAACCTGTCCAGCCCCTTCACTCGGGACAATATCATAGTTACTCTCAT
CCTGGATACCACCAGATGACTTTGCCCCGAACAAACCTGGAGCCACATGG
CCTCTCGAGTGAAGATAAATGCCCGGAAGTTGTACCTTCTATGGCCGACC
ATGGACATCCCCTCTATTACTATATGGCTGCCAGCTGTGATGAAGGGCCC
ACGAAAGCCCGTCTAGAAACTGGAGTGGCAGCCAGGCCAGGCTCGCACCA
GCCCACATCCGCATCGGGATTCCCTGTTGTCATGATGAATGACTTTAACC
TCCATGTACCAGCAGAGCAGCCTGTTTACCCATCTCTTCCATCTGGGTGG
ACATATACATGTGGATAG
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Coding sequence (CDS) from alignment at ch7:4955240..4956457-

>KJC3_011009-T1 ID=KJC3_011009-T1|Name=KJC3_011009-T1|organism=Aspergillus niger KJC3|type=CDS|length=3105bp|location=Sequence derived from alignment at ch7:4955240..4956457- (Aspergillus niger KJC3)
ATTCGTTGAAATGCTGGAATCACACCATTCGCTGGTTGTCAAGGCGCTCC
AAAGGCTATACAAACTGTGCATTGACAAGGAAGGATTTCCCGGCGAGCCT
CTCGTCGAGCTCTCGGACGGTCAGCCTCTAACTCATGCCATCCTGGACCG
TCTCGGATTGATCAAACAGGCCGAAGAGAATCCAGAGGAGCCCGAGGAGG
ATACTGAAGACCTGCGGTATTTGCGGTTCCTGTCTACCTCGACGGACTGC
AGTGCTACGACGGATCCCTCACCAGAACCGGCCACTCCTCCGGATCCTAC
TCCCAGTAGTTGCAGTCCTATCACTCCTACTTCCTCCAAGGGGCCAGAGC
CTTGGAAATGGGAGTTGCAACCTGTCCAGCCCCTTCACTCGGGACAATAT
CATAGTTACTCTCATCCTGGATACCACCAGATGACTTTGCCCCGAACAAA
CCTGGAGCCACATGGCCTCTCGAGTGAAGATAAATGCCCGGAAGTTGTAC
CTTCTATGGCCGACCATGGACATCCCCTCTATTACTATATGGCTGCCAGC
TGTGATGAAGGGCCCACGAAAGCCCGTCTAGAAACTGGAGTGGCAGCCAG
GCCAGGCTCGCACCAGCCCACATCCGCATCGGGATTCCCTGTTGTCATGA
TGAATGACTTTAACCTCCATGTACCAGCAGAGCAGCCTGTTTACCCATCT
CTTCCATCTGGGTGGACATATACATGTGGATAGTGTGATGGGAAACAGCC
GTGCAATCGTTGTTCGGCCTACAATCATCCGTGTCTGTTCCGGGAACGGA
AGGCCACACAGACCAAAGTATACTCTCGAGGATGTCGAGGCAGCCTAAAC
TGCGACCCAAATCGCATATCCCAGGCTTCCCAGACGCCATCTACAATCTT
GCTGCAGTATCATCTTTATCGCAACTTGAGTCTCGCGCAGGACTGGGAGA
TGACAAGCATGACCAGCGCGTCTTTCGTGTCAAACGCAAGCATGTGCTGA
AGGCTTGCGATCGTTGCAGAGTTAAGAAGACCAAGATTCGTTGAAATGCT
GGAATCACACCATTCGCTGGTTGTCAAGGCGCTCCAAAGGCTATACAAAC
TGTGCATTGACAAGGAAGGATTTCCCGGCGAGCCTCTCGTCGAGCTCTCG
GACGGTCAGCCTCTAACTCATGCCATCCTGGACCGTCTCGGATTGATCAA
ACAGGCCGAAGAGAATCCAGAGGAGCCCGAGGAGGATACTGAAGACCTGC
GGTATTTGCGGTTCCTGTCTACCTCGACGGACTGCAGTGCTACGACGGAT
CCCTCACCAGAACCGGCCACTCCTCCGGATCCTACTCCCAGTAGTTGCAG
TCCTATCACTCCTACTTCCTCCAAGGGGCCAGAGCCTTGGAAATGGGAGT
TGCAACCTGTCCAGCCCCTTCACTCGGGACAATATCATAGTTACTCTCAT
CCTGGATACCACCAGATGACTTTGCCCCGAACAAACCTGGAGCCACATGG
CCTCTCGAGTGAAGATAAATGCCCGGAAGTTGTACCTTCTATGGCCGACC
ATGGACATCCCCTCTATTACTATATGGCTGCCAGCTGTGATGAAGGGCCC
ACGAAAGCCCGTCTAGAAACTGGAGTGGCAGCCAGGCCAGGCTCGCACCA
GCCCACATCCGCATCGGGATTCCCTGTTGTCATGATGAATGACTTTAACC
TCCATGTACCAGCAGAGCAGCCTGTTTACCCATCTCTTCCATCTGGGTGG
ACATATACATGTGGATAGTGTGATGGGAAACAGCCGTGCAATCGTTGTTC
GGCCTACAATCATCCGTGTCTGTTCCGGGAACGGAAGGCCACACAGACCA
AAGTATACTCTCGAGGATGTCGAGGCAGCCTAAACTGCGACCCAAATCGC
ATATCCCAGGCTTCCCAGACGCCATCTACAATCTTGCTGCAGTATCATCT
TTATCGCAACTTGAGTCTCGCGCAGGACTGGGAGATGACAAGCATGACCA
GCGCGTCTTTCGTGTCAAACGCAAGCATGTGCTGAAGGCTTGCGATCGTT
GCAGAGTTAAGAAGACCAAGATTCGTTGAAATGCTGGAATCACACCATTC
GCTGGTTGTCAAGGCGCTCCAAAGGCTATACAAACTGTGCATTGACAAGG
AAGGATTTCCCGGCGAGCCTCTCGTCGAGCTCTCGGACGGTCAGCCTCTA
ACTCATGCCATCCTGGACCGTCTCGGATTGATCAAACAGGCCGAAGAGAA
TCCAGAGGAGCCCGAGGAGGATACTGAAGACCTGCGGTATTTGCGGTTCC
TGTCTACCTCGACGGACTGCAGTGCTACGACGGATCCCTCACCAGAACCG
GCCACTCCTCCGGATCCTACTCCCAGTAGTTGCAGTCCTATCACTCCTAC
TTCCTCCAAGGGGCCAGAGCCTTGGAAATGGGAGTTGCAACCTGTCCAGC
CCCTTCACTCGGGACAATATCATAGTTACTCTCATCCTGGATACCACCAG
ATGACTTTGCCCCGAACAAACCTGGAGCCACATGGCCTCTCGAGTGAAGA
TAAATGCCCGGAAGTTGTACCTTCTATGGCCGACCATGGACATCCCCTCT
ATTACTATATGGCTGCCAGCTGTGATGAAGGGCCCACGAAAGCCCGTCTA
GAAACTGGAGTGGCAGCCAGGCCAGGCTCGCACCAGCCCACATCCGCATC
GGGATTCCCTGTTGTCATGATGAATGACTTTAACCTCCATGTACCAGCAG
AGCAGCCTGTTTACCCATCTCTTCCATCTGGGTGGACATATACATGTGGA
TAGTGTGATGGGAAACAGCCGTGCAATCGTTGTTCGGCCTACAATCATCC
GTGTCTGTTCCGGGAACGGAAGGCCACACAGACCAAAGTATACTCTCGAG
GATGTCGAGGCAGCCTAAACTGCGACCCAAATCGCATATCCCAGGCTTCC
CAGACGCCATCTACAATCTTGCTGCAGTATCATCTTTATCGCAACTTGAG
TCTCGCGCAGGACTGGGAGATGACAAGCATGACCAGCGCGTCTTTCGTGT
CAAACGCAAGCATGTGCTGAAGGCTTGCGATCGTTGCAGAGTTAAGAAGA
CCAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011009KJC3_011009Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011009-T1KJC3_011009-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011009-T1.cdsKJC3_011009-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011009-T1.exon3KJC3_011009-T1.exon3Aspergillus niger KJC3exon
KJC3_011009-T1.exon2KJC3_011009-T1.exon2Aspergillus niger KJC3exon
KJC3_011009-T1.exon1KJC3_011009-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch7supercontigch7:4955240..4956457 -
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