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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:4995213..4996601+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011019-T1 ID=KJC3_011019-T1|Name=KJC3_011019-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1389bp|location=Sequence derived from alignment at ch7:4995213..4996601+ (Aspergillus niger KJC3)
CTCTCCCCTCTTCCCCTCCACAGCCCTTGCATTTTCTCTTACTACATCGC
ACATTCCAAAATATATCTCCTGTCAAATCAGAGGCCGTCCTCCAGACCCA
AGTGGTCCCTCACGAGCATACAATCAGACTAGGCCACTGCAAGTTCTCCA
CTCCCCGCATAGACAAAAGTCCCGCCTGTCGCTATCCAGTCCAACATGTC
CCCATCCCTCCAGTCCCCCACCACCAACAGGGCCGCCGACCTGGCCTCCA
AACGCAGACGCTTTCAACCACCAATCACTAGCTTCTTCTCGACTACATCT
ACTCCTCCCTCAGAAGACAATGCCAACGTGACCACCGACCGCTCCCACCA
CCTCTCCCACAACCACTACTCCGCAGCAACCTGCTCCCCCACCCCTATTG
TCCCCACCAAAGTCCAAGCCTCCCTCCTCTCCGTCGGCATGCGTGTTCGC
AAGTCCGTCGCAGAGGGCTACAAGACTCGCCTGGCGAAGTCCGACTCCAG
TTTCTCCGAGCTGGCACCCTACAGCGGCATGCGCAGTCATTCCGCACCCA
TGAACCTTATCACCGACGATGAAGGCGACGCCTTCTCCCTCCCCTCCAGC
AGTCAGGAATCCAACGCTGGTGGCCAGAAACGATCCTACGATATGGACTT
TGATATCGACGATAGTGGTGATGAGAATGACGTTGCTGCTTCCGGCTTGG
ATCTTACTGCTCATAATGCTACTTTCATGGGCCGGACGATCCTTGCGCCC
AAGCTGAATCAACAGCGAAGGCGATTCGTGGCACTGCGGAAACATGCCAC
GATCTCCGAGGGTATGGGTATGGATATCGATGATTTTGAGGAGGCTTCCT
TCTTGCGTAGTCGCGAGGAGGTGGATATGGAGTACGGCTCTGTGAGTCGA
AACTCAGAGATTGAAATGGGTGGTGTTTAAACGTGTGGTTACTTTCGTCT
GTGATTTTCTTTCATCTTCTTTATATTGTCTTTTCTGGGGTATCTTATTA
GCCGGAGTTAAGATGGGTTGGGCTGGATTTGGGTGGTTGTACTATCATCT
GCTGTGGTTTTGTTTGCGCGCAACGTTCCTTGGGGATACACAGTGCCATA
GGCTGGTACTATGTGCTAAAGAACGAGCATGGTGGATGGATTGATACATC
ATGCCTACTGTTCTCATCATTGTGTTCCTTTGCCTTGTCGGTCTTTTCTA
TGCATATTCTTACTTGACCCCTGCTTGTTCTACATTCCCGTTGTTTGTCG
TCAAGCACCCTGTACATAATATCCGATCGCGACGACTACCTACATGTTCA
ACTTCCCTATGCAAGTTAGGCTTATGCAATAGCCAGCACACATGCAGCAG
GCTTGAATCTGAACTGTATGAATGACAAATCAAAGAAAC back to topCoding sequence (CDS) from alignment at ch7:4995213..4996601+ >KJC3_011019-T1 ID=KJC3_011019-T1|Name=KJC3_011019-T1|organism=Aspergillus niger KJC3|type=CDS|length=735bp|location=Sequence derived from alignment at ch7:4995213..4996601+ (Aspergillus niger KJC3)
ATGTCCCCATCCCTCCAGTCCCCCACCACCAACAGGGCCGCCGACCTGGC
CTCCAAACGCAGACGCTTTCAACCACCAATCACTAGCTTCTTCTCGACTA
CATCTACTCCTCCCTCAGAAGACAATGCCAACGTGACCACCGACCGCTCC
CACCACCTCTCCCACAACCACTACTCCGCAGCAACCTGCTCCCCCACCCC
TATTGTCCCCACCAAAGTCCAAGCCTCCCTCCTCTCCGTCGGCATGCGTG
TTCGCAAGTCCGTCGCAGAGGGCTACAAGACTCGCCTGGCGAAGTCCGAC
TCCAGTTTCTCCGAGCTGGCACCCTACAGCGGCATGCGCAGTCATTCCGC
ACCCATGAACCTTATCACCGACGATGAAGGCGACGCCTTCTCCCTCCCCT
CCAGCAGTCAGGAATCCAACGCTGGTGGCCAGAAACGATCCTACGATATG
GACTTTGATATCGACGATAGTGGTGATGAGAATGACGTTGCTGCTTCCGG
CTTGGATCTTACTGCTCATAATGCTACTTTCATGGGCCGGACGATCCTTG
CGCCCAAGCTGAATCAACAGCGAAGGCGATTCGTGGCACTGCGGAAACAT
GCCACGATCTCCGAGGGTATGGGTATGGATATCGATGATTTTGAGGAGGC
TTCCTTCTTGCGTAGTCGCGAGGAGGTGGATATGGAGTACGGCTCTGTGA
GTCGAAACTCAGAGATTGAAATGGGTGGTGTTTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011019-T1.utr5p1 | KJC3_011019-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011019-T1.utr3p1 | KJC3_011019-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_7.12 |
| DBxref | InterPro:IPR013900 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:4995213..4996601 + |
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