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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch7:5394142..5396228+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011161-T1 ID=KJC3_011161-T1|Name=KJC3_011161-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2087bp|location=Sequence derived from alignment at ch7:5394142..5396228+ (Aspergillus niger KJC3)
CATCAACCCTTCATCCACTCCTTTCTTCTCCCTTAAAGACTTGCCTTAAC
TTTGTATCTTCTTCAACACTCTTTTCAATTTACTTCTACACCTCAATTCT
CCAAGTTCATCATGCGTCGTGCTGCGATGATGGCGGGTTTGTCCGCCACC
GCCGCACATGCGGCATCTCTGGCTGATGTCTGTACCACTTCCAACGTCAA
GGCTGCCCTGCCCAGCTCTGTGTACGGACTCACCATGATTCCTTCTTCCG
TCACCGCTTCGCCAGTCTACAACGCCTCTACCAGCGGTCAGGTCTTCTTC
CCCGATGCCACCTACGACTACTGCGGTGTCACCTTCAACTACACCCACAA
TGGTCGCGGCGACACCGTCAAGTTGCAGTACTGGCTTCCCGCCCCTGAGA
GCTTCGAGAATCGCTTCCTGGCCACCGGTGGTATGGCCTACATGATCACC
GGTGGCTCTAGCTATCTGCCCGGTGGTGTCATGTATGGTGCTGTTGCCGG
TACCACAGACGGTGGTTTTGGTGGTGAATTGGACACTGCTTTCCTCCTGG
CAAATGGCACGATCAACTACGAGGCCCTCTACTCCATGGGCTACCACGGT
ATCGGCGAGCTGACCATCGTTGGCAAGGAGTTCACCAAGAACTTTTACAG
CATGGGTGACGAGAAGCTGTACACCTACTACCAGGGTTGCTCTGAGGGTG
GTCGTGAAGGCTGGAGTCAGGTCCAGAAGTACCCTGGTGTTTATGACGGT
GTTATCCCTGGTGCCCCTGCCATTCGCTACGGTCAGCAGCAGGCCAACCA
CCTTTACTCCAACGTTGTTGAGAAGACTCTCGGATACTACCCCCCTCCCT
GCGAGCTGGAGAAAATCGTCAATGCCACCATCGACGCATGTGATTCTCTT
GATGGCAAGGTGGACGGTGTCGTTGCCCGTACCGACCTCTGTCAGCTCCA
CTTCAACATCAACTCCACCATCGGTCTTCCCTACCACTGCGCCGCCAGCT
CGAGCAGCAGTATTGGCCTTAATTATGGCAAGCGTAGCACTGACCCCGCC
ATCAACGGCACTGTCTCTGCCCAGGGTGTTGCCGTGGCTGCTGAAATCCT
GAAGGGCCTGCATGACTCCAAGGGCCGCCGTGCTTACATCTCCTACCAGC
CTACTGCCTCCTTCGACGACGCTGAGACCTCCTACAACTCGGAGACTGGC
GAGTATGAACTGAGCATTGCCTCTAGCGGTGGCGAGTGGGTTGCCAAGTT
TCTGGAGCTCCGCGATGCCGACAACCTATCTACCCTTGACAACGTCACCT
ACGATACCCTCCGCGACTGGATGGAGTTGGGCTGGAAGCGCTACGAAGAT
GTAATGCAGACCACCTGGCCTGACCTGACTGAATTTGAGAAGGCTGGTGG
TAAGATCATTACATTCCACGGTGAATCTGACCAATCTATCCCTACCGGCT
CTTCGGTCCACTTCTACAACTCCGTCCGCAGCATCATGTACCCTGATATG
TCTTACAACGCCAGTGTCGCTGCCATGGGTGACTGGTACCGCCTGTTCCT
TGTTCCTGGTGCCGCTCACTGTGCCACCAACGATCTCCAGGCAAACGGTC
CCTTCCCCCAGACCAACCTGGCTGTTATGATCAACTGGGTGGAGAAGGGT
GTTGTTCCCCATACCCTCAACGCCACGCACCTGGCGGGTGAGTGGGAGGG
CCAGAACGCCCAGCTTTGCTCCTGGCCCCTTCGGCCCCTCTGGACCGAGA
ACGGTACCAAGTTCAACTGCGTCTATGACCAGGCCTCTGTTGACACCTGG
GACTACAACTTTGACTCCTACAAGGTGCCCCTCTACTAAGCAGACGATCA
AGGCTGCGCATTGCACGGTTGACGCATAATCGTTATAGCGATTTATGTAT
ATCAATTTAGTGTCACTTTCTCTGTCTATTTTTAGGGTTCACGGTGATGG
CCTCTCTGGTCCTGGCTTGTCTAGTACTTTCCTACCTTGAGATGGCATAA
CCTTTGTTGCGCATATCACTTCTATCACTGGACTTCTTTATCTGCATCTG
TGAATGCACACGTAATAGACTTAATACATTACACATC back to topCoding sequence (CDS) from alignment at ch7:5394142..5396228+ >KJC3_011161-T1 ID=KJC3_011161-T1|Name=KJC3_011161-T1|organism=Aspergillus niger KJC3|type=CDS|length=1728bp|location=Sequence derived from alignment at ch7:5394142..5396228+ (Aspergillus niger KJC3)
ATGCGTCGTGCTGCGATGATGGCGGGTTTGTCCGCCACCGCCGCACATGC
GGCATCTCTGGCTGATGTCTGTACCACTTCCAACGTCAAGGCTGCCCTGC
CCAGCTCTGTGTACGGACTCACCATGATTCCTTCTTCCGTCACCGCTTCG
CCAGTCTACAACGCCTCTACCAGCGGTCAGGTCTTCTTCCCCGATGCCAC
CTACGACTACTGCGGTGTCACCTTCAACTACACCCACAATGGTCGCGGCG
ACACCGTCAAGTTGCAGTACTGGCTTCCCGCCCCTGAGAGCTTCGAGAAT
CGCTTCCTGGCCACCGGTGGTATGGCCTACATGATCACCGGTGGCTCTAG
CTATCTGCCCGGTGGTGTCATGTATGGTGCTGTTGCCGGTACCACAGACG
GTGGTTTTGGTGGTGAATTGGACACTGCTTTCCTCCTGGCAAATGGCACG
ATCAACTACGAGGCCCTCTACTCCATGGGCTACCACGGTATCGGCGAGCT
GACCATCGTTGGCAAGGAGTTCACCAAGAACTTTTACAGCATGGGTGACG
AGAAGCTGTACACCTACTACCAGGGTTGCTCTGAGGGTGGTCGTGAAGGC
TGGAGTCAGGTCCAGAAGTACCCTGGTGTTTATGACGGTGTTATCCCTGG
TGCCCCTGCCATTCGCTACGGTCAGCAGCAGGCCAACCACCTTTACTCCA
ACGTTGTTGAGAAGACTCTCGGATACTACCCCCCTCCCTGCGAGCTGGAG
AAAATCGTCAATGCCACCATCGACGCATGTGATTCTCTTGATGGCAAGGT
GGACGGTGTCGTTGCCCGTACCGACCTCTGTCAGCTCCACTTCAACATCA
ACTCCACCATCGGTCTTCCCTACCACTGCGCCGCCAGCTCGAGCAGCAGT
ATTGGCCTTAATTATGGCAAGCGTAGCACTGACCCCGCCATCAACGGCAC
TGTCTCTGCCCAGGGTGTTGCCGTGGCTGCTGAAATCCTGAAGGGCCTGC
ATGACTCCAAGGGCCGCCGTGCTTACATCTCCTACCAGCCTACTGCCTCC
TTCGACGACGCTGAGACCTCCTACAACTCGGAGACTGGCGAGTATGAACT
GAGCATTGCCTCTAGCGGTGGCGAGTGGGTTGCCAAGTTTCTGGAGCTCC
GCGATGCCGACAACCTATCTACCCTTGACAACGTCACCTACGATACCCTC
CGCGACTGGATGGAGTTGGGCTGGAAGCGCTACGAAGATGTAATGCAGAC
CACCTGGCCTGACCTGACTGAATTTGAGAAGGCTGGTGGTAAGATCATTA
CATTCCACGGTGAATCTGACCAATCTATCCCTACCGGCTCTTCGGTCCAC
TTCTACAACTCCGTCCGCAGCATCATGTACCCTGATATGTCTTACAACGC
CAGTGTCGCTGCCATGGGTGACTGGTACCGCCTGTTCCTTGTTCCTGGTG
CCGCTCACTGTGCCACCAACGATCTCCAGGCAAACGGTCCCTTCCCCCAG
ACCAACCTGGCTGTTATGATCAACTGGGTGGAGAAGGGTGTTGTTCCCCA
TACCCTCAACGCCACGCACCTGGCGGGTGAGTGGGAGGGCCAGAACGCCC
AGCTTTGCTCCTGGCCCCTTCGGCCCCTCTGGACCGAGAACGGTACCAAG
TTCAACTGCGTCTATGACCAGGCCTCTGTTGACACCTGGGACTACAACTT
TGACTCCTACAAGGTGCCCCTCTACTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011161-T1.utr5p1 | KJC3_011161-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011161-T1.utr3p1 | KJC3_011161-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_7.13 |
| Note | SECRETED:SignalP(1-31) |
| DBxref | InterPro:IPR029058 |
| DBxref | InterPro:IPR011118 |
| DBxref | PFAM:PF07519 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch7 | supercontig | ch7:5394142..5396228 + |
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