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KJC3_011386-T1, KJC3_011386-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011386-T1
Unique NameKJC3_011386-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:468652..470331-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011386-T1 ID=KJC3_011386-T1|Name=KJC3_011386-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1680bp|location=Sequence derived from alignment at ch8:468652..470331- (Aspergillus niger KJC3)
ATGGCAAGCCCGACATCAGCTCTGGACAGCCGGTTGCCTCGTCATGCATC
ATCGGGCCCTGTTAATAGTACCGTGACAGCCCTCCAAGGAGCCACAGCTG
CTTTCAATGCAAATCCTGCCAGCAGAGCACGGCCACCTATTATCCATTAT
AGGTCTGGCGCATTCATGGAGCCTGTAGGGGTCAGCCACAATACTCCTGA
AATGGATCCGCCTCGCAACATTCAGACTCCAGAATTGCCCGAAAGTGGCT
CAGTCAAAGACAAGATCGGGAAGTTTAGTGCCTATCAGCAGCAGCCCTCT
GGCTTGAAAGATGCATTCGGGAAAACCCCAACGAGCATAGGGGCGAATAG
GTCACGCACTCCGCAGCAGATCGCTGCCCAGCTGGCCGCAGGAAGATCGA
CGCCAGGTGAAATCACTGCCACGCACACGGGCGTCAGCAGGACGCAAGGT
TCGAGACCGACGACTTCAAAACGCAGTGATGACAACGAGGGTCCGCCGTT
GCTAGCCCCAAAGCCGGTATGGGCTACGAGTGCAAACACGGCCTCGGTGA
ACAAGCTCCTTCGCAGCGAGGCCGATTTGCCAATTAGAGACAAGTCAATT
CAGCGAAGACCAGTAGCTCAGATATCTCCCATAGAGGCGGCGAGGTTGGC
TGCGAAGAAGCCTCGACCTCCACCTGTGCCACGAAAACCAGCTGCGGTTG
CCACTGGTCCAACCTCAGTTCCTATCAACGTACATTCCAAAGGCCCAGAG
AGTCCAGAGCCGACCTCCAAAAACCACTCCTCACGTCACCTTGAGGATAC
TACTATCCCTTTCAAGGCCCCGCCAGCACTTCCACCCCGAACTGGCGCTT
CGTCCGTGCCTCGGAAAGACCTGACAAATCATCGGCGGCTTTTAGACACC
AACCATGGGTCCCGGAGACGACCATCGACGCCTGGGACTGCATCGCTGTA
TACTACATCACTGAGCAATAGTACTACGAGTTTGCTCGACAGCTCCTCCG
GACTGGATGAAGGGGCCTTATCGGATGCGGTCGTGGCCTCGTCAAGGGCA
TCTGTTCGGGCTTCACAGGAAAGGAAAGTCCCACCGCCCCCACCGCCAGA
GCGCCGGGCGAGGTCTCGATCTCTAAAGCAATTCCCGCATACGGCCAAGG
GAGAACACACAGATTCATCTAGTCCATCCACACATTTACGACAGACCCTC
CGGGAACCGACCAAGATAGCCGAAAATGATGAGGGGTACCAAAGGCATAA
GCATCTGATTCGCAAGCATCCGCACAAGCATCACGAAGGTGACCGCAGAA
GATGGCGGAGTGAGATTACGGAGAAAGAGCGAAAGCGGTACGAGGGTGTC
TGGGCTGCGAACAAGGGATTGTTGCTCCCTCCCGCGCACTTGAGGGTCCC
CGAAGCGTACCCGCCGGAGTCCTCCGAGATGGTGGTCAACCTGGTGGCCG
CTGACATCTGGTCACGTAGTCGCCTGCCGCGACATGTTCTAGCACAAGTA
TGGGATTTAGTGGACGGGCAACATATTGGTCTTCTCACCCGAGAGGAATT
TGTGGTTGGGATGTGGTTGATCGACCAGCAGCTGAAAGGCCATAAACTCC
CACCCAGGGTGCCCGCCAGTGTGTGGGGAAGCGCCAAGCGGATATCAGGA
GTGCACATTCATGGGCTTCCTCCTGCCTGA
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Coding sequence (CDS) from alignment at ch8:468652..470331-

>KJC3_011386-T1 ID=KJC3_011386-T1|Name=KJC3_011386-T1|organism=Aspergillus niger KJC3|type=CDS|length=1680bp|location=Sequence derived from alignment at ch8:468652..470331- (Aspergillus niger KJC3)
ATGGCAAGCCCGACATCAGCTCTGGACAGCCGGTTGCCTCGTCATGCATC
ATCGGGCCCTGTTAATAGTACCGTGACAGCCCTCCAAGGAGCCACAGCTG
CTTTCAATGCAAATCCTGCCAGCAGAGCACGGCCACCTATTATCCATTAT
AGGTCTGGCGCATTCATGGAGCCTGTAGGGGTCAGCCACAATACTCCTGA
AATGGATCCGCCTCGCAACATTCAGACTCCAGAATTGCCCGAAAGTGGCT
CAGTCAAAGACAAGATCGGGAAGTTTAGTGCCTATCAGCAGCAGCCCTCT
GGCTTGAAAGATGCATTCGGGAAAACCCCAACGAGCATAGGGGCGAATAG
GTCACGCACTCCGCAGCAGATCGCTGCCCAGCTGGCCGCAGGAAGATCGA
CGCCAGGTGAAATCACTGCCACGCACACGGGCGTCAGCAGGACGCAAGGT
TCGAGACCGACGACTTCAAAACGCAGTGATGACAACGAGGGTCCGCCGTT
GCTAGCCCCAAAGCCGGTATGGGCTACGAGTGCAAACACGGCCTCGGTGA
ACAAGCTCCTTCGCAGCGAGGCCGATTTGCCAATTAGAGACAAGTCAATT
CAGCGAAGACCAGTAGCTCAGATATCTCCCATAGAGGCGGCGAGGTTGGC
TGCGAAGAAGCCTCGACCTCCACCTGTGCCACGAAAACCAGCTGCGGTTG
CCACTGGTCCAACCTCAGTTCCTATCAACGTACATTCCAAAGGCCCAGAG
AGTCCAGAGCCGACCTCCAAAAACCACTCCTCACGTCACCTTGAGGATAC
TACTATCCCTTTCAAGGCCCCGCCAGCACTTCCACCCCGAACTGGCGCTT
CGTCCGTGCCTCGGAAAGACCTGACAAATCATCGGCGGCTTTTAGACACC
AACCATGGGTCCCGGAGACGACCATCGACGCCTGGGACTGCATCGCTGTA
TACTACATCACTGAGCAATAGTACTACGAGTTTGCTCGACAGCTCCTCCG
GACTGGATGAAGGGGCCTTATCGGATGCGGTCGTGGCCTCGTCAAGGGCA
TCTGTTCGGGCTTCACAGGAAAGGAAAGTCCCACCGCCCCCACCGCCAGA
GCGCCGGGCGAGGTCTCGATCTCTAAAGCAATTCCCGCATACGGCCAAGG
GAGAACACACAGATTCATCTAGTCCATCCACACATTTACGACAGACCCTC
CGGGAACCGACCAAGATAGCCGAAAATGATGAGGGGTACCAAAGGCATAA
GCATCTGATTCGCAAGCATCCGCACAAGCATCACGAAGGTGACCGCAGAA
GATGGCGGAGTGAGATTACGGAGAAAGAGCGAAAGCGGTACGAGGGTGTC
TGGGCTGCGAACAAGGGATTGTTGCTCCCTCCCGCGCACTTGAGGGTCCC
CGAAGCGTACCCGCCGGAGTCCTCCGAGATGGTGGTCAACCTGGTGGCCG
CTGACATCTGGTCACGTAGTCGCCTGCCGCGACATGTTCTAGCACAAGTA
TGGGATTTAGTGGACGGGCAACATATTGGTCTTCTCACCCGAGAGGAATT
TGTGGTTGGGATGTGGTTGATCGACCAGCAGCTGAAAGGCCATAAACTCC
CACCCAGGGTGCCCGCCAGTGTGTGGGGAAGCGCCAAGCGGATATCAGGA
GTGCACATTCATGGGCTTCCTCCTGCCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
IRS4KJC3_011386Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011386-T1.cdsKJC3_011386-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011386-T1.exon1KJC3_011386-T1.exon1Aspergillus niger KJC3exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011386-T1KJC3_011386-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR011992
DBxrefInterPro:IPR000261
DBxrefPFAM:PF12763
ProductIncreased rDNA silencing protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:468652..470331 -
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