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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:1079396..1080973- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011590-T1 ID=KJC3_011590-T1|Name=KJC3_011590-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1578bp|location=Sequence derived from alignment at ch8:1079396..1080973- (Aspergillus niger KJC3)
ATGTTTTCTACGCGCCAATTTGTCGCTCTTGCGGCAATCCTGCAGGCAGC
TACTCAGGCTTCAGCTCAGGACCTGAAAGAGCAAGTTTGGGCGGTATTCG
CCTACACCCTATACGGAGATCGTGTCCCGACAGCCCTGCCTCGTCCCAAT
ATATTGACACCATATGGTGCCAACACACTGTATGAAGCTGGGTCTGCTTT
CCGAGACCGATATGTGGCAATCCATTCGACCGACGTCAGCCCGAGTACAA
GAATTGAGAGCATCTCTACGTATGCGCTCGAAGACGAAGATCTTGATATT
CTGTCTACCACCGATCCATCGGTCATCGCGTCCGCGCAGGCTTTTATGCA
GGGGCTATACCCACCTCTCAACGATACTTATGACGTGCAATATCCCGACC
CTTCATATCTCATGGCCAATGGGAGCTTTGCAACTGCTCCTATGGGTGGC
TACCAATATCCACCCATTGTCACCGTGAGCTCGGACGACCCCCAGTCGGT
CGTAGTGGCAGGCCAAGATAATTGCTTCCTGCATCAGATCGCCAATGCTG
ACTACCAGGCTAGCAGCGAAGCTCAGCAGATGATACAGGAGTCTGACGCG
CTCTACAACCGTCTTTATATCCAGGCCCTGTCGGGCGATTTTGACCGCTC
TTCAGTCAACTATGCGAACTCCGTCGCGGTCTCCGAATTCTTAGAGTACC
AGCTCTTGCACAACGAGACACTATTACACAGCGTCAGCCAAGAGGACATA
AGGCTCGCGCGCTGGTATGCCGATCAATATACCTTTGCAACAAACGGCAA
CGCAGATTCATCCTTGTCAAGTCCAATTGATAGCAGTGCCATTCGCACAA
TTGCAGGCCAGACACTGGCTGGAAGTATCTTGGATGCATTCGACACCAAT
GTTCTTTACCGGGGTAGCAGTGGGAAATTGACATTCGTCTTCGGAGGCTA
CGAGCCCGCTGTCGCTCTTACCTCCCTCGTGCAACTTGCGTCCCCAGCAA
ATGGAAAATTCTATGGACGACCTGCGCTCGGGGCCTCGCTCACCTTTGAG
CTCTTTAGCTTGGAGAATCAATCGTTTCCGACCTATCCCGACCCATCTCA
GCTTTATGTGAGGTTCCTCCTGCGCAATGGAACAACATCACCGGAGTTCC
AATCCTACCCGCTTTTCGGTCATAGTCCCAGCAGCATCGAGGTTCCCTAT
AGCGAATTTAAGGCTGAGATGCAGGCATTCTCGCTCAATTCGACGCAGGA
GTGGTGTCTCCTGTGTGATTCGACGTCGTCAACTGTATTCTGCCCTGGTG
TCCTGGATGATGAAGACGACGGACCGAGTAGTAGCGCAGCCTCTTCCTCC
GGACGCAAAGGTATTAGTCCTGCCGTTGGAGGAGTCATCGGTGCGATTGT
GACTCTAGTTGTCGTTGGGTTGCTTGCTGCTGCCGGGTTCCTGCTCCTCG
GGGTCCGAGTACAGCGTGGACGCAGGGCGAGCTTGGAGGAGATTAAAGGA
GGCATTGATTTAGGAAGTGAGTCAAACCTGGCCTTGCGGGAACATGCTGC
GCCGCCAGGAAAGACGGCGAGGCCTTGA back to topCoding sequence (CDS) from alignment at ch8:1079396..1080973- >KJC3_011590-T1 ID=KJC3_011590-T1|Name=KJC3_011590-T1|organism=Aspergillus niger KJC3|type=CDS|length=1578bp|location=Sequence derived from alignment at ch8:1079396..1080973- (Aspergillus niger KJC3)
ATGTTTTCTACGCGCCAATTTGTCGCTCTTGCGGCAATCCTGCAGGCAGC
TACTCAGGCTTCAGCTCAGGACCTGAAAGAGCAAGTTTGGGCGGTATTCG
CCTACACCCTATACGGAGATCGTGTCCCGACAGCCCTGCCTCGTCCCAAT
ATATTGACACCATATGGTGCCAACACACTGTATGAAGCTGGGTCTGCTTT
CCGAGACCGATATGTGGCAATCCATTCGACCGACGTCAGCCCGAGTACAA
GAATTGAGAGCATCTCTACGTATGCGCTCGAAGACGAAGATCTTGATATT
CTGTCTACCACCGATCCATCGGTCATCGCGTCCGCGCAGGCTTTTATGCA
GGGGCTATACCCACCTCTCAACGATACTTATGACGTGCAATATCCCGACC
CTTCATATCTCATGGCCAATGGGAGCTTTGCAACTGCTCCTATGGGTGGC
TACCAATATCCACCCATTGTCACCGTGAGCTCGGACGACCCCCAGTCGGT
CGTAGTGGCAGGCCAAGATAATTGCTTCCTGCATCAGATCGCCAATGCTG
ACTACCAGGCTAGCAGCGAAGCTCAGCAGATGATACAGGAGTCTGACGCG
CTCTACAACCGTCTTTATATCCAGGCCCTGTCGGGCGATTTTGACCGCTC
TTCAGTCAACTATGCGAACTCCGTCGCGGTCTCCGAATTCTTAGAGTACC
AGCTCTTGCACAACGAGACACTATTACACAGCGTCAGCCAAGAGGACATA
AGGCTCGCGCGCTGGTATGCCGATCAATATACCTTTGCAACAAACGGCAA
CGCAGATTCATCCTTGTCAAGTCCAATTGATAGCAGTGCCATTCGCACAA
TTGCAGGCCAGACACTGGCTGGAAGTATCTTGGATGCATTCGACACCAAT
GTTCTTTACCGGGGTAGCAGTGGGAAATTGACATTCGTCTTCGGAGGCTA
CGAGCCCGCTGTCGCTCTTACCTCCCTCGTGCAACTTGCGTCCCCAGCAA
ATGGAAAATTCTATGGACGACCTGCGCTCGGGGCCTCGCTCACCTTTGAG
CTCTTTAGCTTGGAGAATCAATCGTTTCCGACCTATCCCGACCCATCTCA
GCTTTATGTGAGGTTCCTCCTGCGCAATGGAACAACATCACCGGAGTTCC
AATCCTACCCGCTTTTCGGTCATAGTCCCAGCAGCATCGAGGTTCCCTAT
AGCGAATTTAAGGCTGAGATGCAGGCATTCTCGCTCAATTCGACGCAGGA
GTGGTGTCTCCTGTGTGATTCGACGTCGTCAACTGTATTCTGCCCTGGTG
TCCTGGATGATGAAGACGACGGACCGAGTAGTAGCGCAGCCTCTTCCTCC
GGACGCAAAGGTATTAGTCCTGCCGTTGGAGGAGTCATCGGTGCGATTGT
GACTCTAGTTGTCGTTGGGTTGCTTGCTGCTGCCGGGTTCCTGCTCCTCG
GGGTCCGAGTACAGCGTGGACGCAGGGCGAGCTTGGAGGAGATTAAAGGA
GGCATTGATTTAGGAAGTGAGTCAAACCTGGCCTTGCGGGAACATGCTGC
GCCGCCAGGAAAGACGGCGAGGCCTTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-22) |
| DBxref | InterPro:IPR000560 |
| DBxref | InterPro:IPR029033 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:1079396..1080973 - |
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