You are here

Home

KJC3_011597-T1, KJC3_011597-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011597-T1
Unique NameKJC3_011597-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:1093973..1095771+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011597-T1 ID=KJC3_011597-T1|Name=KJC3_011597-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1799bp|location=Sequence derived from alignment at ch8:1093973..1095771+ (Aspergillus niger KJC3)
ATCTTCCACACAGCCAGGTTACCCCTCCAGATTTTATCTCTCTATTTTAT
CTTCCCTCACTTTCCTTCATCCCCTCATCCTCTCCTGAAGAGCGTTTCCT
TATTCTCCGCCCCACCTCAGTGGTCTGCTAACATCATTACTGTACTCACG
ATGTCAGACTCTCAGGATCCAGGAGATACTGTCAAAGAACTTCCTCTTCG
CCCAGCTGCATCGAAAACCATCAACGATCCTCAGCAGACGGACCCGTTAC
CAGAAACCTCAGAAGATAAACCAGACTCGACCCCCACCAGTCCTAAATCT
CAGTCACTCGAGGAGTTACCCATTGAAATTGACCAGGCTAAGAAGAAAAA
GAAGAAGAGCAAGGCGCGTCCCAAGAGTAAGCGTGGAAAGGTGAGACCAC
TTACGAATGCGAAGAATTGCAACCAGACTGAATTCTACAGAACAAGCCTA
CCGGTTTCGAAGAGTACTATGTCGACGCACCCATTACCCCCGAGGAATTT
AGCGCTGAAAAGGAGCTCTACAATGTGTATGTTCCCAACACCCAACGTAT
AGCACCCGCTGACCGGCATTGGCGTGAAGCTCGCGACCTCTCACCCAGTA
AGTCTTGCCACCTTATGGTTCTGGCTCTCATACTGACCAGTCCCAGCCGA
ATTGAGGACGCTCTCTTACGCTACCAAAAGAATCGTCGTCTGGAGTCAGA
CAGACGAGATGTTTTCCTGAAATATCTGGCATATGGAGGGGTGAACGTCG
GTCAGAGGATGTTCGGGGGCTTGGATGGCCGTGACCTCCAGCAACTGGAC
AGCGAACAGATCCTACAAGCGCGAGCAGTGCCCAGCGTAGGCAAGGACAA
ATCTAATCTTGCTGTTGATTTTGATGCAGTGGTTCGCGGCTTTCTGTAGG
AGTTACACACGCCGTGAAACTGCGTTTGACTAACTCACAATAGGACTTCC
TTCTTTCCATACTATTTTAACCCCGACACCGAAGATATGATCAAGCTAGC
GACAGTCACCATTCGGAACTTTCTATCCTACCTCCTCTATCATGATGTAT
GCCCGGAGTACAACGATAACATCGACCAGGCCAGGACGTCGTGCGATATA
GCTACAAGGGAGCTGTGGAACAACCAGCAACTCATGGCCAAAGGCCCTGG
TGACTTCAACTCGTGCTGTTCCTTGCTTTTCGGTGGAGAGCTGCATGACA
CATATACGGAGGGCAATCAGTGGAGAAACTCCAAGGATGATGCGCCTCGC
CTGACCACTGAGATAGCCCGCAAAATCGTCAAGTTTGCCCTGGCCGGCGC
GGGTGAGAATCGCCATGCCCTCCGGTTCCAGGAACTGACCGAGAATAAAA
CGCTGTGCGCAGTGCGTATCGAGGATATTGATGGGTTTGAGATTACCGCT
GTTCACCCTCCCGGCGAAGTCGTCCGCGAGTTCTACCAGACGCACGCCCC
GGATCTTGTCCCCGTCGGAAAGCTGCTAGCAAGGACTTACCGAGATCCAG
GTATGCCTGATTATGATCGCAGCCCGGAGGAGCGAGTGGTACAGCCGGAA
AGGAACTTTGAATTCTTCATGGAGGGCAATCTACTTCAGTACTGCTACCC
GGGAATGAAAGTAATCGCTCCGGTATGGGAGCTGAATTGTGGATTCCATT
ATTTCGAGGATGCGTATAGGACGTATGGCTCCAATTACACCCCTCTCGTG
AATGACTTGATGCTAGGATGGAAGGAGCCGAGGGATCTAGCCAAAGCAGA
GAGCAAAGCAGAGAGCGATGGGGAGGATGACTCGTCTGTTACTCTGTGA
back to top

Coding sequence (CDS) from alignment at ch8:1093973..1095771+

>KJC3_011597-T1 ID=KJC3_011597-T1|Name=KJC3_011597-T1|organism=Aspergillus niger KJC3|type=CDS|length=7245bp|location=Sequence derived from alignment at ch8:1093973..1095771+ (Aspergillus niger KJC3)
ATGTCAGACTCTCAGGATCCAGGAGATACTGTCAAAGAACTTCCTCTTCG
CCCAGCTGCATCGAAAACCATCAACGATCCTCAGCAGACGGACCCGTTAC
CAGAAACCTCAGAAGATAAACCAGACTCGACCCCCACCAGTCCTAAATCT
CAGTCACTCGAGGAGTTACCCATTGAAATTGACCAGGCTAAGAAGAAAAA
GAAGAAGAGCAAGGCGCGTCCCAAGAGTAAGCGTGGAAAGAACAAGCCTA
CCGGTTTCGAAGAGTACTATGTCGACGCACCCATTACCCCCGAGGAATTT
AGCGCTGAAAAGGAGCTCTACAATGTCTCGCGACCTCTCACCCACCGAAT
TGAGGACGCTCTCTTACGCTACCAAAAGAATCGTCGTCTGGAGTCAGACA
GACGAGATGTTTTCCTGAAATATCTGGCATATGGAGGGGTGAACGTCGGT
CAGAGGATGTTCGGGGGCTTGGATGGCCGTGACCTCCAGCAACTGGACAG
CGAACAGATCCTACAAGCGCGAGCAGTGCCCAGCGTAGGCAAGGACAAAT
CTAATCTTGCTGTTGATTTTGATGCAGTGGTTCGCGGCTTTCTGACTTCC
TTCTTTCCATACTATTTTAACCCCGACACCGAAGATATGATCAAGCTAGC
GACAGTCACCATTCGGAACTTTCTATCCTACCTCCTCTATCATGATGTAT
GCCCGGAGTACAACGATAACATCGACCAGGCCAGGACGTCGTGCGATATA
GCTACAAGGGAGCTGTGGAACAACCAGCAACTCATGGCCAAAGGCCCTGG
TGACTTCAACTCGTGCTGTTCCTTGCTTTTCGGTGGAGAGCTGCATGACA
CATATACGGAGGGCAATCAGTGGAGAAACTCCAAGGATGATGCGCCTCGC
CTGACCACTGAGATAGCCCGCAAAATCGTCAAGTTTGCCCTGGCCGGCGC
GGGTGAGAATCGCCATGCCCTCCGGTTCCAGGAACTGACCGAGAATAAAA
CGCTGTGCGCAGTGCGTATCGAGGATATTGATGGGTTTGAGATTACCGCT
GTTCACCCTCCCGGCGAAGTCGTCCGCGAGTTCTACCAGACGCACGCCCC
GGATCTTGTCCCCGTCGGAAAGCTGCTAGCAAGGACTTACCGAGATCCAG
GTATGCCTGATTATGATCGCAGCCCGGAGGAGCGAGTGGTACAGCCGGAA
AGGAACTTTGAATTCTTCATGGAGGGCAATCTACTTCAGTACTGCTACCC
GGGAATGAAAGTAATCGCTCCGGTATGGGAGCTGAATTGTGGATTCCATT
ATTTCGAGGATGCGTATAGGACGTATGGCTCCAATTACACCCCTCTCGTG
AATGACTTGATGCTAGGATGGAAGGAGCCGAGGGATCTAGCCAAAGCAGA
GAGCAAAGCAGAGAGCGATGGGGAGGATGACTCGTCTGTTACTCTGTGAA
TGTCAGACTCTCAGGATCCAGGAGATACTGTCAAAGAACTTCCTCTTCGC
CCAGCTGCATCGAAAACCATCAACGATCCTCAGCAGACGGACCCGTTACC
AGAAACCTCAGAAGATAAACCAGACTCGACCCCCACCAGTCCTAAATCTC
AGTCACTCGAGGAGTTACCCATTGAAATTGACCAGGCTAAGAAGAAAAAG
AAGAAGAGCAAGGCGCGTCCCAAGAGTAAGCGTGGAAAGAACAAGCCTAC
CGGTTTCGAAGAGTACTATGTCGACGCACCCATTACCCCCGAGGAATTTA
GCGCTGAAAAGGAGCTCTACAATGTCTCGCGACCTCTCACCCACCGAATT
GAGGACGCTCTCTTACGCTACCAAAAGAATCGTCGTCTGGAGTCAGACAG
ACGAGATGTTTTCCTGAAATATCTGGCATATGGAGGGGTGAACGTCGGTC
AGAGGATGTTCGGGGGCTTGGATGGCCGTGACCTCCAGCAACTGGACAGC
GAACAGATCCTACAAGCGCGAGCAGTGCCCAGCGTAGGCAAGGACAAATC
TAATCTTGCTGTTGATTTTGATGCAGTGGTTCGCGGCTTTCTGACTTCCT
TCTTTCCATACTATTTTAACCCCGACACCGAAGATATGATCAAGCTAGCG
ACAGTCACCATTCGGAACTTTCTATCCTACCTCCTCTATCATGATGTATG
CCCGGAGTACAACGATAACATCGACCAGGCCAGGACGTCGTGCGATATAG
CTACAAGGGAGCTGTGGAACAACCAGCAACTCATGGCCAAAGGCCCTGGT
GACTTCAACTCGTGCTGTTCCTTGCTTTTCGGTGGAGAGCTGCATGACAC
ATATACGGAGGGCAATCAGTGGAGAAACTCCAAGGATGATGCGCCTCGCC
TGACCACTGAGATAGCCCGCAAAATCGTCAAGTTTGCCCTGGCCGGCGCG
GGTGAGAATCGCCATGCCCTCCGGTTCCAGGAACTGACCGAGAATAAAAC
GCTGTGCGCAGTGCGTATCGAGGATATTGATGGGTTTGAGATTACCGCTG
TTCACCCTCCCGGCGAAGTCGTCCGCGAGTTCTACCAGACGCACGCCCCG
GATCTTGTCCCCGTCGGAAAGCTGCTAGCAAGGACTTACCGAGATCCAGG
TATGCCTGATTATGATCGCAGCCCGGAGGAGCGAGTGGTACAGCCGGAAA
GGAACTTTGAATTCTTCATGGAGGGCAATCTACTTCAGTACTGCTACCCG
GGAATGAAAGTAATCGCTCCGGTATGGGAGCTGAATTGTGGATTCCATTA
TTTCGAGGATGCGTATAGGACGTATGGCTCCAATTACACCCCTCTCGTGA
ATGACTTGATGCTAGGATGGAAGGAGCCGAGGGATCTAGCCAAAGCAGAG
AGCAAAGCAGAGAGCGATGGGGAGGATGACTCGTCTGTTACTCTGTGAAT
GTCAGACTCTCAGGATCCAGGAGATACTGTCAAAGAACTTCCTCTTCGCC
CAGCTGCATCGAAAACCATCAACGATCCTCAGCAGACGGACCCGTTACCA
GAAACCTCAGAAGATAAACCAGACTCGACCCCCACCAGTCCTAAATCTCA
GTCACTCGAGGAGTTACCCATTGAAATTGACCAGGCTAAGAAGAAAAAGA
AGAAGAGCAAGGCGCGTCCCAAGAGTAAGCGTGGAAAGAACAAGCCTACC
GGTTTCGAAGAGTACTATGTCGACGCACCCATTACCCCCGAGGAATTTAG
CGCTGAAAAGGAGCTCTACAATGTCTCGCGACCTCTCACCCACCGAATTG
AGGACGCTCTCTTACGCTACCAAAAGAATCGTCGTCTGGAGTCAGACAGA
CGAGATGTTTTCCTGAAATATCTGGCATATGGAGGGGTGAACGTCGGTCA
GAGGATGTTCGGGGGCTTGGATGGCCGTGACCTCCAGCAACTGGACAGCG
AACAGATCCTACAAGCGCGAGCAGTGCCCAGCGTAGGCAAGGACAAATCT
AATCTTGCTGTTGATTTTGATGCAGTGGTTCGCGGCTTTCTGACTTCCTT
CTTTCCATACTATTTTAACCCCGACACCGAAGATATGATCAAGCTAGCGA
CAGTCACCATTCGGAACTTTCTATCCTACCTCCTCTATCATGATGTATGC
CCGGAGTACAACGATAACATCGACCAGGCCAGGACGTCGTGCGATATAGC
TACAAGGGAGCTGTGGAACAACCAGCAACTCATGGCCAAAGGCCCTGGTG
ACTTCAACTCGTGCTGTTCCTTGCTTTTCGGTGGAGAGCTGCATGACACA
TATACGGAGGGCAATCAGTGGAGAAACTCCAAGGATGATGCGCCTCGCCT
GACCACTGAGATAGCCCGCAAAATCGTCAAGTTTGCCCTGGCCGGCGCGG
GTGAGAATCGCCATGCCCTCCGGTTCCAGGAACTGACCGAGAATAAAACG
CTGTGCGCAGTGCGTATCGAGGATATTGATGGGTTTGAGATTACCGCTGT
TCACCCTCCCGGCGAAGTCGTCCGCGAGTTCTACCAGACGCACGCCCCGG
ATCTTGTCCCCGTCGGAAAGCTGCTAGCAAGGACTTACCGAGATCCAGGT
ATGCCTGATTATGATCGCAGCCCGGAGGAGCGAGTGGTACAGCCGGAAAG
GAACTTTGAATTCTTCATGGAGGGCAATCTACTTCAGTACTGCTACCCGG
GAATGAAAGTAATCGCTCCGGTATGGGAGCTGAATTGTGGATTCCATTAT
TTCGAGGATGCGTATAGGACGTATGGCTCCAATTACACCCCTCTCGTGAA
TGACTTGATGCTAGGATGGAAGGAGCCGAGGGATCTAGCCAAAGCAGAGA
GCAAAGCAGAGAGCGATGGGGAGGATGACTCGTCTGTTACTCTGTGAATG
TCAGACTCTCAGGATCCAGGAGATACTGTCAAAGAACTTCCTCTTCGCCC
AGCTGCATCGAAAACCATCAACGATCCTCAGCAGACGGACCCGTTACCAG
AAACCTCAGAAGATAAACCAGACTCGACCCCCACCAGTCCTAAATCTCAG
TCACTCGAGGAGTTACCCATTGAAATTGACCAGGCTAAGAAGAAAAAGAA
GAAGAGCAAGGCGCGTCCCAAGAGTAAGCGTGGAAAGAACAAGCCTACCG
GTTTCGAAGAGTACTATGTCGACGCACCCATTACCCCCGAGGAATTTAGC
GCTGAAAAGGAGCTCTACAATGTCTCGCGACCTCTCACCCACCGAATTGA
GGACGCTCTCTTACGCTACCAAAAGAATCGTCGTCTGGAGTCAGACAGAC
GAGATGTTTTCCTGAAATATCTGGCATATGGAGGGGTGAACGTCGGTCAG
AGGATGTTCGGGGGCTTGGATGGCCGTGACCTCCAGCAACTGGACAGCGA
ACAGATCCTACAAGCGCGAGCAGTGCCCAGCGTAGGCAAGGACAAATCTA
ATCTTGCTGTTGATTTTGATGCAGTGGTTCGCGGCTTTCTGACTTCCTTC
TTTCCATACTATTTTAACCCCGACACCGAAGATATGATCAAGCTAGCGAC
AGTCACCATTCGGAACTTTCTATCCTACCTCCTCTATCATGATGTATGCC
CGGAGTACAACGATAACATCGACCAGGCCAGGACGTCGTGCGATATAGCT
ACAAGGGAGCTGTGGAACAACCAGCAACTCATGGCCAAAGGCCCTGGTGA
CTTCAACTCGTGCTGTTCCTTGCTTTTCGGTGGAGAGCTGCATGACACAT
ATACGGAGGGCAATCAGTGGAGAAACTCCAAGGATGATGCGCCTCGCCTG
ACCACTGAGATAGCCCGCAAAATCGTCAAGTTTGCCCTGGCCGGCGCGGG
TGAGAATCGCCATGCCCTCCGGTTCCAGGAACTGACCGAGAATAAAACGC
TGTGCGCAGTGCGTATCGAGGATATTGATGGGTTTGAGATTACCGCTGTT
CACCCTCCCGGCGAAGTCGTCCGCGAGTTCTACCAGACGCACGCCCCGGA
TCTTGTCCCCGTCGGAAAGCTGCTAGCAAGGACTTACCGAGATCCAGGTA
TGCCTGATTATGATCGCAGCCCGGAGGAGCGAGTGGTACAGCCGGAAAGG
AACTTTGAATTCTTCATGGAGGGCAATCTACTTCAGTACTGCTACCCGGG
AATGAAAGTAATCGCTCCGGTATGGGAGCTGAATTGTGGATTCCATTATT
TCGAGGATGCGTATAGGACGTATGGCTCCAATTACACCCCTCTCGTGAAT
GACTTGATGCTAGGATGGAAGGAGCCGAGGGATCTAGCCAAAGCAGAGAG
CAAAGCAGAGAGCGATGGGGAGGATGACTCGTCTGTTACTCTGTGAATGT
CAGACTCTCAGGATCCAGGAGATACTGTCAAAGAACTTCCTCTTCGCCCA
GCTGCATCGAAAACCATCAACGATCCTCAGCAGACGGACCCGTTACCAGA
AACCTCAGAAGATAAACCAGACTCGACCCCCACCAGTCCTAAATCTCAGT
CACTCGAGGAGTTACCCATTGAAATTGACCAGGCTAAGAAGAAAAAGAAG
AAGAGCAAGGCGCGTCCCAAGAGTAAGCGTGGAAAGAACAAGCCTACCGG
TTTCGAAGAGTACTATGTCGACGCACCCATTACCCCCGAGGAATTTAGCG
CTGAAAAGGAGCTCTACAATGTCTCGCGACCTCTCACCCACCGAATTGAG
GACGCTCTCTTACGCTACCAAAAGAATCGTCGTCTGGAGTCAGACAGACG
AGATGTTTTCCTGAAATATCTGGCATATGGAGGGGTGAACGTCGGTCAGA
GGATGTTCGGGGGCTTGGATGGCCGTGACCTCCAGCAACTGGACAGCGAA
CAGATCCTACAAGCGCGAGCAGTGCCCAGCGTAGGCAAGGACAAATCTAA
TCTTGCTGTTGATTTTGATGCAGTGGTTCGCGGCTTTCTGACTTCCTTCT
TTCCATACTATTTTAACCCCGACACCGAAGATATGATCAAGCTAGCGACA
GTCACCATTCGGAACTTTCTATCCTACCTCCTCTATCATGATGTATGCCC
GGAGTACAACGATAACATCGACCAGGCCAGGACGTCGTGCGATATAGCTA
CAAGGGAGCTGTGGAACAACCAGCAACTCATGGCCAAAGGCCCTGGTGAC
TTCAACTCGTGCTGTTCCTTGCTTTTCGGTGGAGAGCTGCATGACACATA
TACGGAGGGCAATCAGTGGAGAAACTCCAAGGATGATGCGCCTCGCCTGA
CCACTGAGATAGCCCGCAAAATCGTCAAGTTTGCCCTGGCCGGCGCGGGT
GAGAATCGCCATGCCCTCCGGTTCCAGGAACTGACCGAGAATAAAACGCT
GTGCGCAGTGCGTATCGAGGATATTGATGGGTTTGAGATTACCGCTGTTC
ACCCTCCCGGCGAAGTCGTCCGCGAGTTCTACCAGACGCACGCCCCGGAT
CTTGTCCCCGTCGGAAAGCTGCTAGCAAGGACTTACCGAGATCCAGGTAT
GCCTGATTATGATCGCAGCCCGGAGGAGCGAGTGGTACAGCCGGAAAGGA
ACTTTGAATTCTTCATGGAGGGCAATCTACTTCAGTACTGCTACCCGGGA
ATGAAAGTAATCGCTCCGGTATGGGAGCTGAATTGTGGATTCCATTATTT
CGAGGATGCGTATAGGACGTATGGCTCCAATTACACCCCTCTCGTGAATG
ACTTGATGCTAGGATGGAAGGAGCCGAGGGATCTAGCCAAAGCAGAGAGC
AAAGCAGAGAGCGATGGGGAGGATGACTCGTCTGTTACTCTGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0033167ARC complex
Vocabulary: Biological Process
TermDefinition
GO:0031047gene silencing by RNA
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011597KJC3_011597Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011597-T1KJC3_011597-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011597-T1.utr5p1KJC3_011597-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011597-T1.exon1KJC3_011597-T1.exon1Aspergillus niger KJC3exon
KJC3_011597-T1.exon2KJC3_011597-T1.exon2Aspergillus niger KJC3exon
KJC3_011597-T1.exon3KJC3_011597-T1.exon3Aspergillus niger KJC3exon
KJC3_011597-T1.exon4KJC3_011597-T1.exon4Aspergillus niger KJC3exon
KJC3_011597-T1.exon5KJC3_011597-T1.exon5Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011597-T1.cdsKJC3_011597-T1.cdsAspergillus niger KJC3CDS


Properties
Property NameValue
DBxrefInterPro:IPR018606
DBxrefPFAM:PF09692
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:1093973..1095771 +
Powered by Drupal