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KJC3_011606-T1, KJC3_011606-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011606-T1
Unique NameKJC3_011606-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:1115542..1118143-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011606-T1 ID=KJC3_011606-T1|Name=KJC3_011606-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2602bp|location=Sequence derived from alignment at ch8:1115542..1118143- (Aspergillus niger KJC3)
GTCTCACATACGGCCTCTGAGCTGAGACTTGACGCATTCTCATCATCTAC
TAATCTATGCAGTGCATCCCTTCTAACTAAGCGATATTCTGCTTCAGTGG
CACTATTCTCTTTCTCCTAACATATCATTTTCCTCTTTTCTTTCCAACCC
CTATCTGTTGATAATGAACAAAGAACAGTCGTCAGAGAAGCATGATGACT
CAAGTCGCACAATAACAACAATTTCACTTGGTCACGACTCCATTGTCCCT
TCCACTGACTTGTCAGACAAGGCGCTGTCTAAAAATGACCCAGTCGATAA
CGGACCGGTAACCTCAGACACCGAGCAAGCTCAACCACTAGCACCAACAG
AAGTTGATGGTGGTTATGGCTGGGTCTGTGTGGTGTGTGTCTTTTTGGTC
AATGCCCATACTTGGGGCATCAACAGTGTAAGGTCTCATTGCCTCCAGGC
AAGTCTTAATTCACTAATTTCCTTTGCAAATTAGGCCTACGGTGTTTTCT
TGGCCCATTATTTGGACACGAACACATTCCCAGGTGCATCAGACCTCGAC
TATGCCTTTGTCGGAGGCCTCTCTCTCAGTATGGCACAATTCATCGCGCC
GGTCGCAACAATCACAACCCGAGTATGGGGGACAAGGGCTACCTTGATGA
TTGGTATTACATTGCAGACCGCGGCACTATTAGGAGCGTCGTGGGCGGGT
CAGATTTGGCAGTTGTTTCTCAGTCAAGCTCTGTGTTTCGGATTTGGAAT
GGGAATGCAATTCAGTGCTACTGTTGGCATCATTCCTCAGTGGTTTACCC
GCCGTCGTTCTCTTGCGAATGGTATTGCAACGGCGGGATCAGGAATTGGA
GGCCTTATCTACTCGTTAGCTACAAGTGCCATGATCCAGAATTTGGGCAT
TGGATGGGCTTTCCGGATCCTGGCAATTGTCTCCGCTGCTGCGTGCGGCT
TCTCTGCTATCATTGTGAAGGATCGAAACAAAGCCATTGGAGCTGTTCAA
ATCGCCTTCCATACCGAGCTCCTGAAAAGACCAGAGTTCCTGCTCACTTT
GGCCTGGGGTTGCTTTAGCGTGCTGGGCTACGTGGCCCTTCTGTTCTCCA
TCCCCGACTACGCAAGCACTGTTGGCCTGACAGCATCTCAAGGCTCGATT
GTTGGTGCCATGTTCAACCTTGGAGGAGGCCTTGGACGACCTGTTATAGG
GTACGTCAGCGATAGCTTTGGACGGCTGAACACCGCTCTCGCTTGTACGT
TCCTGGCGGGCCTGTTTTCTCTCGTCATCTGGATCTTTGCCAAAAATTTC
GGGGTCCTTATCTTCTACGCTCTGATTAGCGGCCCTGTTGCTGCAACCTT
CACGACTACTGTAGCTCCAGTAGGTGCAGAGGTTGTGGGTTTACAGCTCT
TATCATCTGCTTTGTCGATCTTCTGGCTTTCGGTGGTCATCCCGAGCACA
TTTGCTGAACCGATTGCCCTTTGGCTACGAACTGATAACGAAACCAACTT
TCTGCATGCCCAAGTGTTTGTCGGTTTTATGTTCATGGCAGCATGCATTT
GTCTCTGGCTTGTACGAGCGTGGAAGGTAGCAGAGTTGGAAAATGCTGCC
ACTGACAGCGATCCTCTAAAAGGTGAAGTCCAAATTAGGGACAACGATGC
CGTGCTCCAAGGGCCCGTGGCCAGAACGACGAGCAGAATACCCAGGATGA
CGAGTAAGGCGAATATCGTGAGAAGATTGTTCACGATGGCGAGGGTATAA
CTCGTGTAGACCGAGATGTCTAGGAAGGTGATATCCTAGTCTACCGTTCT
ATAGATAGGAGCTAATTAGCCAACTTCATGGCTGCACGCTAGTTCTGCAC
AAAAGTCTCTGAAACTCCTGACAGTAAACCACGTGCCACCGGGCAAGAAC
CTTTTCGTTTCAGGGAGTAATTAAGCTTCAGGCCTTGTTGTTTGCAAAGT
TACAGTGCTCTATATTCTAGTTTCATGCCATGATCCATAACCTAATGTTG
ACCTGAAGCCTCCTAGTTGAACCGTATCAACTTTTGCTCCTTTATCTTCT
TTGGTGCAGTAATTTCGCTCGGGCAGCTAATCATTAGAATCACCCCTCTC
AATGCACATTCGACCTGTACTCGAGTTCACGTATAGTCAGGATCTTCAAC
AAAGGCATGTCCGGTGTCTGGAGGTCAGTCAAGTATCGAAGTCGCCTCTC
ACCAGCCCACTTGAGTAATTGCGCTCATGAATTTCCTGTTTGAAGCGCGG
CCGGTCATGACATTCCGCATATTGGTTAGTGTGATGAAAGCTATTGATCT
TGGAAATATGTGCTCATATATGAGTAAGTTCTGCTGGACTTCGCTGATCA
CGTCGTCCTATTCAGCAATATTCTTCTACCAAATTAAAAACAACGTAAGA
ATAAAAGATGGAGCTACCCCAAAGCGACTTCTCAGTCACGCAAAGATGAC
GCCGCGAGGCATGAGCTCCTCCCATCGGAGGCTGTCATGAGATCATGAGA
TCTAATTGTTCGCTGCAAGCATAATCAATAGTAAATCTTTGTAGAAATTA
GATATTTCTCAATTCATAATTTATCATAGGGGGAGACAATAGTAAGTTCT
CC
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Coding sequence (CDS) from alignment at ch8:1115542..1118143-

>KJC3_011606-T1 ID=KJC3_011606-T1|Name=KJC3_011606-T1|organism=Aspergillus niger KJC3|type=CDS|length=3060bp|location=Sequence derived from alignment at ch8:1115542..1118143- (Aspergillus niger KJC3)
GCCTACGGTGTTTTCTTGGCCCATTATTTGGACACGAACACATTCCCAGG
TGCATCAGACCTCGACTATGCCTTTGTCGGAGGCCTCTCTCTCAGTATGG
CACAATTCATCGCGCCGGTCGCAACAATCACAACCCGAGTATGGGGGACA
AGGGCTACCTTGATGATTGGTATTACATTGCAGACCGCGGCACTATTAGG
AGCGTCGTGGGCGGGTCAGATTTGGCAGTTGTTTCTCAGTCAAGCTCTGT
GTTTCGGATTTGGAATGGGAATGCAATTCAGTGCTACTGTTGGCATCATT
CCTCAGTGGTTTACCCGCCGTCGTTCTCTTGCGAATGGTATTGCAACGGC
GGGATCAGGAATTGGAGGCCTTATCTACTCGTTAGCTACAAGTGCCATGA
TCCAGAATTTGGGCATTGGATGGGCTTTCCGGATCCTGGCAATTGTCTCC
GCTGCTGCGTGCGGCTTCTCTGCTATCATTGTGAAGGATCGAAACAAAGC
CATTGGAGCTGTTCAAATCGCCTTCCATACCGAGCTCCTGAAAAGACCAG
AGTTCCTGCTCACTTTGGCCTGGGGTTGCTTTAGCGTGCTGGGCTACGTG
GCCCTTCTGTTCTCCATCCCCGACTACGCAAGCACTGTTGGCCTGACAGC
ATCTCAAGGCTCGATTGTTGGTGCCATGTTCAACCTTGGAGGAGGCCTTG
GACGACCTGTTATAGGGTACGTCAGCGATAGCTTTGGACGGCTGAACACC
GCTCTCGCTTGTACGTTCCTGGCGGGCCTGTTTTCTCTCGTCATCTGGAT
CTTTGCCAAAAATTTCGGGGTCCTTATCTTCTACGCTCTGATTAGCGGCC
CTGTTGCTGCAACCTTCACGACTACTGTAGCTCCAGTAGGTGCAGAGGTT
GTGGGTTTACAGCTCTTATCATCTGCTTTGTCGATCTTCTGGCTTTCGGT
GGTCATCCCGAGCACATTTGCTGAACCGATTGCCCTTTGGCTACGAACTG
ATAACGAAACCAACTTTCTGCATGCCCAAGTGTTTGTCGGTTTTATGTTC
ATGGCAGCATGCATTTGTCTCTGGCTTGTACGAGCGTGGAAGGTAGCAGA
GTTGGAAAATGCTGCCACTGACAGCGATCCTCTAAAAGGTGAAGTCCAAA
TTAGGGACAACGATGCCGTGCTCCAAGGGCCCGTGGCCAGAACGACGAGC
AGAATACCCAGGATGACGAGTAAGGCGAATATCGTGAGAAGATTGTTCAC
GATGGCGAGGGTATAAATGAACAAAGAACAGTCGTCAGAGAAGCATGATG
ACTCAAGTCGCACAATAACAACAATTTCACTTGGTCACGACTCCATTGTC
CCTTCCACTGACTTGTCAGACAAGGCGCTGTCTAAAAATGACCCAGTCGA
TAACGGACCGGTAACCTCAGACACCGAGCAAGCTCAACCACTAGCACCAA
CAGAAGTTGATGGTGGTTATGGCTGGGTCTGTGTGGTGTGTGTCTTTTTG
GTCAATGCCCATACTTGGGGCATCAACAGTGCCTACGGTGTTTTCTTGGC
CCATTATTTGGACACGAACACATTCCCAGGTGCATCAGACCTCGACTATG
CCTTTGTCGGAGGCCTCTCTCTCAGTATGGCACAATTCATCGCGCCGGTC
GCAACAATCACAACCCGAGTATGGGGGACAAGGGCTACCTTGATGATTGG
TATTACATTGCAGACCGCGGCACTATTAGGAGCGTCGTGGGCGGGTCAGA
TTTGGCAGTTGTTTCTCAGTCAAGCTCTGTGTTTCGGATTTGGAATGGGA
ATGCAATTCAGTGCTACTGTTGGCATCATTCCTCAGTGGTTTACCCGCCG
TCGTTCTCTTGCGAATGGTATTGCAACGGCGGGATCAGGAATTGGAGGCC
TTATCTACTCGTTAGCTACAAGTGCCATGATCCAGAATTTGGGCATTGGA
TGGGCTTTCCGGATCCTGGCAATTGTCTCCGCTGCTGCGTGCGGCTTCTC
TGCTATCATTGTGAAGGATCGAAACAAAGCCATTGGAGCTGTTCAAATCG
CCTTCCATACCGAGCTCCTGAAAAGACCAGAGTTCCTGCTCACTTTGGCC
TGGGGTTGCTTTAGCGTGCTGGGCTACGTGGCCCTTCTGTTCTCCATCCC
CGACTACGCAAGCACTGTTGGCCTGACAGCATCTCAAGGCTCGATTGTTG
GTGCCATGTTCAACCTTGGAGGAGGCCTTGGACGACCTGTTATAGGGTAC
GTCAGCGATAGCTTTGGACGGCTGAACACCGCTCTCGCTTGTACGTTCCT
GGCGGGCCTGTTTTCTCTCGTCATCTGGATCTTTGCCAAAAATTTCGGGG
TCCTTATCTTCTACGCTCTGATTAGCGGCCCTGTTGCTGCAACCTTCACG
ACTACTGTAGCTCCAGTAGGTGCAGAGGTTGTGGGTTTACAGCTCTTATC
ATCTGCTTTGTCGATCTTCTGGCTTTCGGTGGTCATCCCGAGCACATTTG
CTGAACCGATTGCCCTTTGGCTACGAACTGATAACGAAACCAACTTTCTG
CATGCCCAAGTGTTTGTCGGTTTTATGTTCATGGCAGCATGCATTTGTCT
CTGGCTTGTACGAGCGTGGAAGGTAGCAGAGTTGGAAAATGCTGCCACTG
ACAGCGATCCTCTAAAAGGTGAAGTCCAAATTAGGGACAACGATGCCGTG
CTCCAAGGGCCCGTGGCCAGAACGACGAGCAGAATACCCAGGATGACGAG
TAAGGCGAATATCGTGAGAAGATTGTTCACGATGGCGAGGGTATAAATGA
ACAAAGAACAGTCGTCAGAGAAGCATGATGACTCAAGTCGCACAATAACA
ACAATTTCACTTGGTCACGACTCCATTGTCCCTTCCACTGACTTGTCAGA
CAAGGCGCTGTCTAAAAATGACCCAGTCGATAACGGACCGGTAACCTCAG
ACACCGAGCAAGCTCAACCACTAGCACCAACAGAAGTTGATGGTGGTTAT
GGCTGGGTCTGTGTGGTGTGTGTCTTTTTGGTCAATGCCCATACTTGGGG
CATCAACAGT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011606KJC3_011606Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011606-T1KJC3_011606-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011606-T1.cdsKJC3_011606-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011606-T1.utr3p1KJC3_011606-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011606-T1.exon2KJC3_011606-T1.exon2Aspergillus niger KJC3exon
KJC3_011606-T1.exon1KJC3_011606-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011606-T1.utr5p1KJC3_011606-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:1115542..1118143 -
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