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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2029009..2029780- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011923-T1 ID=KJC3_011923-T1|Name=KJC3_011923-T1|organism=Aspergillus niger KJC3|type=mRNA|length=772bp|location=Sequence derived from alignment at ch8:2029009..2029780- (Aspergillus niger KJC3)
GAGTAAGGTTGGACTACTATTGGTATGACAAGTTACGCTTCGCACTTGAC
TAAACTCAACTATTCGTTCAAATACTTGATCACTTGACAAATATGCCGAT
GTATGCCCCAACATAGCACTAGACTCCCATATACAACACACAAACTCGAC
ACGAGCAATATAGTCGAATTGATACTAACAAAGAATACAGGAAACTTGAA
GGCAGCTGCCAGTGTGGCAGCGTTGAGTTCGCACTCGAATCGTCAACTCC
AGTTCCCTATCAACTATGCGCCTGTAGCATCTGCCGGAAGGTAGGCGGGT
ACAGTGGCAGCGTCAATCTGGGCGGTATTGCCGACAGCCTGAAGATCAAG
AAGGGAAAGGATTTGATCAAGTAAGTCATGTTTGTCTGCCTTTAACTTCG
TAGTGTTTTGTCTGCTATTGGATATTCGATGGGTGTTGAAGGATGGCGGT
TCGGGCTGACCGGTTTAGGAAATATTCCGCTGTCATGGCGAGAGGCACAC
CAGATGAGAAGATCTGTGCGTCGGAGCGGAATTTCTGTTCCAATTGCAGC
ACCATGCTTTGGCTGTGGGATCACCATTGGCCAGAGCTCATTCATCCTTT
TGCTTCGGCCATTGATACCGAACTGCCGGTCCCTGATGAGATGGTCTGCC
TTATGGAGAACTCTAAGCCGGCGTGGGTGCGATGGCCTGAGGGGAAGAAG
CAGGTATACGATGTTTATCCAGAGGACAGCTTGGAAGACTGGCACAAGAA
GCACAACTTGTTCTTCGAGTAG back to topCoding sequence (CDS) from alignment at ch8:2029009..2029780- >KJC3_011923-T1 ID=KJC3_011923-T1|Name=KJC3_011923-T1|organism=Aspergillus niger KJC3|type=CDS|length=1476bp|location=Sequence derived from alignment at ch8:2029009..2029780- (Aspergillus niger KJC3)
GAAATATTCCGCTGTCATGGCGAGAGGCACACCAGATGAGAAGATCTGTG
CGTCGGAGCGGAATTTCTGTTCCAATTGCAGCACCATGCTTTGGCTGTGG
GATCACCATTGGCCAGAGCTCATTCATCCTTTTGCTTCGGCCATTGATAC
CGAACTGCCGGTCCCTGATGAGATGGTCTGCCTTATGGAGAACTCTAAGC
CGGCGTGGGTGCGATGGCCTGAGGGGAAGAAGCAGGTATACGATGTTTAT
CCAGAGGACAGCTTGGAAGACTGGCACAAGAAGCACAACTTGTTCTTCGA
GTAGGAAACTTGAAGGCAGCTGCCAGTGTGGCAGCGTTGAGTTCGCACTC
GAATCGTCAACTCCAGTTCCCTATCAACTATGCGCCTGTAGCATCTGCCG
GAAGGTAGGCGGGTACAGTGGCAGCGTCAATCTGGGCGGTATTGCCGACA
GCCTGAAGATCAAGAAGGGAAAGGATTTGATCAAATGCCGATGAAATATT
CCGCTGTCATGGCGAGAGGCACACCAGATGAGAAGATCTGTGCGTCGGAG
CGGAATTTCTGTTCCAATTGCAGCACCATGCTTTGGCTGTGGGATCACCA
TTGGCCAGAGCTCATTCATCCTTTTGCTTCGGCCATTGATACCGAACTGC
CGGTCCCTGATGAGATGGTCTGCCTTATGGAGAACTCTAAGCCGGCGTGG
GTGCGATGGCCTGAGGGGAAGAAGCAGGTATACGATGTTTATCCAGAGGA
CAGCTTGGAAGACTGGCACAAGAAGCACAACTTGTTCTTCGAGTAGGAAA
CTTGAAGGCAGCTGCCAGTGTGGCAGCGTTGAGTTCGCACTCGAATCGTC
AACTCCAGTTCCCTATCAACTATGCGCCTGTAGCATCTGCCGGAAGGTAG
GCGGGTACAGTGGCAGCGTCAATCTGGGCGGTATTGCCGACAGCCTGAAG
ATCAAGAAGGGAAAGGATTTGATCAAATGCCGATGAAATATTCCGCTGTC
ATGGCGAGAGGCACACCAGATGAGAAGATCTGTGCGTCGGAGCGGAATTT
CTGTTCCAATTGCAGCACCATGCTTTGGCTGTGGGATCACCATTGGCCAG
AGCTCATTCATCCTTTTGCTTCGGCCATTGATACCGAACTGCCGGTCCCT
GATGAGATGGTCTGCCTTATGGAGAACTCTAAGCCGGCGTGGGTGCGATG
GCCTGAGGGGAAGAAGCAGGTATACGATGTTTATCCAGAGGACAGCTTGG
AAGACTGGCACAAGAAGCACAACTTGTTCTTCGAGTAGGAAACTTGAAGG
CAGCTGCCAGTGTGGCAGCGTTGAGTTCGCACTCGAATCGTCAACTCCAG
TTCCCTATCAACTATGCGCCTGTAGCATCTGCCGGAAGGTAGGCGGGTAC
AGTGGCAGCGTCAATCTGGGCGGTATTGCCGACAGCCTGAAGATCAAGAA
GGGAAAGGATTTGATCAAATGCCGAT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016846 | carbon-sulfur lyase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011923-T1.utr5p1 | KJC3_011923-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011057 |
| DBxref | InterPro:IPR006913 |
| DBxref | PFAM:PF04828 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2029009..2029780 - |
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