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KJC3_011932-T1, KJC3_011932-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011932-T1
Unique NameKJC3_011932-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:2056764..2058115+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011932-T1 ID=KJC3_011932-T1|Name=KJC3_011932-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1352bp|location=Sequence derived from alignment at ch8:2056764..2058115+ (Aspergillus niger KJC3)
CCCGCGACGCCTTTGCTTTGCTCGTGATAAGACATTTCCGTTCACTGTGA
TACCCCCCCCCTATACCTCACACAATGGTAAGATCGCTCCTTTGTGCAGC
GAAATTTCTTTTGTCTCTATGACTAAAACCTAAACTTTCCTCTCTTTAGG
CTCCCACAGAGTCCAAGAAGCGCCTCGCGCTCGCCATCATTGACTTCCTC
GGTGCCAGCTTGAAGGATGGCACCCTTACCGCCGACGATGCCGAATCCAT
CGAGATCGCCCAGTCCTGTATCGCCGACACCTTCAAGGTTGACCCCTCCA
ACGAGGCTGCTGTGAAGGATGCCGTGGGTGGACAGTCTCTGGCCAGCATC
TACAGTGTCTACGAGAAGCTTCGCAACAAGCCCACCGGCGACTCTGCCAA
GGCTGGCGAAAGCCAGAAGCCTGCGGCTGGCGCTCCCACCCCCGAGTCCG
ATAAGCTGAAGTCCGAGGGTAACGGTGCCATGGCCCGCAAGGACTACAGC
ACCGCTATTGACCTCTACACCCAAGCCCTGGCTATTGCTCCCTCGAACCC
CATCTACCTCTCCAACCGGGCTGCTGCCTATTCCGCGGCCGGACAGCACG
AGAAGGCGGCCGAGGATGCCGAGCTCGCCACTGCTGTTGACCCCAAGTAC
TCCAAGGCCTGGAGCCGTCTGGGACTGGCTCGTTTCGACTTGGCTGATTA
CCACGGTGCCAAGGAGGCCTATGAGAAGGGTATCGAGGCTGAGGGCAACG
GCGGCAGCGAGGCCATGAAGCGGGGTCTGGAGACTACTAAGCGCAAGATC
GAGGAGGCCAAGCGTAGCACCGAGCCTCCCGCTGATGCTGTTGACGATGC
TGCTGGTGCTTCCCGTGGTGGTGGCGGTATGCCTGATCTGTCTTCCCTTG
CTAGCATGCTGGGAGGTGGAGGTGGCGGCGGCGGTATGCCCGACCTCAGC
TCTATCATGAGCAACCCCATGTTCGCCAGCATGGCCCAGAACCTGATGAG
CAACCCCGATATGCTCAACAACCTCATGAGCAACCCCCAGCTGAGACAGA
TGGCTGAAAACTATGGCCGTGGCGGTGGTATGCCCGACATGTCCTCTTTG
ATGAGCGATCCCAACATTGCCGATATGTAAGTAATATGACATACCTGGTC
CATTGCGTTGCAGCTGACATGTATTTTCTAGGGCTCGTAACATGATGGGC
GGCGGTGCCGGACGTGGAAACCAGTAAGCGGGATATCATGAATGTGTTAG
TGTTTCGGAGCTTTATCTGTCCTTTTCATCTGAAAACCATTGTCGCGCTC
TCAATTTCGTATACGTGCAATGTATGATCATCTTAATTATGGAAGCGAAT
AG
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Coding sequence (CDS) from alignment at ch8:2056764..2058115+

>KJC3_011932-T1 ID=KJC3_011932-T1|Name=KJC3_011932-T1|organism=Aspergillus niger KJC3|type=CDS|length=3078bp|location=Sequence derived from alignment at ch8:2056764..2058115+ (Aspergillus niger KJC3)
ATGGCTCCCACAGAGTCCAAGAAGCGCCTCGCGCTCGCCATCATTGACTT
CCTCGGTGCCAGCTTGAAGGATGGCACCCTTACCGCCGACGATGCCGAAT
CCATCGAGATCGCCCAGTCCTGTATCGCCGACACCTTCAAGGTTGACCCC
TCCAACGAGGCTGCTGTGAAGGATGCCGTGGGTGGACAGTCTCTGGCCAG
CATCTACAGTGTCTACGAGAAGCTTCGCAACAAGCCCACCGGCGACTCTG
CCAAGGCTGGCGAAAGCCAGAAGCCTGCGGCTGGCGCTCCCACCCCCGAG
TCCGATAAGCTGAAGTCCGAGGGTAACGGTGCCATGGCCCGCAAGGACTA
CAGCACCGCTATTGACCTCTACACCCAAGCCCTGGCTATTGCTCCCTCGA
ACCCCATCTACCTCTCCAACCGGGCTGCTGCCTATTCCGCGGCCGGACAG
CACGAGAAGGCGGCCGAGGATGCCGAGCTCGCCACTGCTGTTGACCCCAA
GTACTCCAAGGCCTGGAGCCGTCTGGGACTGGCTCGTTTCGACTTGGCTG
ATTACCACGGTGCCAAGGAGGCCTATGAGAAGGGTATCGAGGCTGAGGGC
AACGGCGGCAGCGAGGCCATGAAGCGGGGTCTGGAGACTACTAAGCGCAA
GATCGAGGAGGCCAAGCGTAGCACCGAGCCTCCCGCTGATGCTGTTGACG
ATGCTGCTGGTGCTTCCCGTGGTGGTGGCGGTATGCCTGATCTGTCTTCC
CTTGCTAGCATGCTGGGAGGTGGAGGTGGCGGCGGCGGTATGCCCGACCT
CAGCTCTATCATGAGCAACCCCATGTTCGCCAGCATGGCCCAGAACCTGA
TGAGCAACCCCGATATGCTCAACAACCTCATGAGCAACCCCCAGCTGAGA
CAGATGGCTGAAAACTATGGCCGTGGCGGTGGTATGCCCGACATGTCCTC
TTTGATGAGCGATCCCAACATTGCCGATATGGCTCGTAACATGATGGGCG
GCGGTGCCGGACGTGGAAACCAGTAAATGGCTCCCACAGAGTCCAAGAAG
CGCCTCGCGCTCGCCATCATTGACTTCCTCGGTGCCAGCTTGAAGGATGG
CACCCTTACCGCCGACGATGCCGAATCCATCGAGATCGCCCAGTCCTGTA
TCGCCGACACCTTCAAGGTTGACCCCTCCAACGAGGCTGCTGTGAAGGAT
GCCGTGGGTGGACAGTCTCTGGCCAGCATCTACAGTGTCTACGAGAAGCT
TCGCAACAAGCCCACCGGCGACTCTGCCAAGGCTGGCGAAAGCCAGAAGC
CTGCGGCTGGCGCTCCCACCCCCGAGTCCGATAAGCTGAAGTCCGAGGGT
AACGGTGCCATGGCCCGCAAGGACTACAGCACCGCTATTGACCTCTACAC
CCAAGCCCTGGCTATTGCTCCCTCGAACCCCATCTACCTCTCCAACCGGG
CTGCTGCCTATTCCGCGGCCGGACAGCACGAGAAGGCGGCCGAGGATGCC
GAGCTCGCCACTGCTGTTGACCCCAAGTACTCCAAGGCCTGGAGCCGTCT
GGGACTGGCTCGTTTCGACTTGGCTGATTACCACGGTGCCAAGGAGGCCT
ATGAGAAGGGTATCGAGGCTGAGGGCAACGGCGGCAGCGAGGCCATGAAG
CGGGGTCTGGAGACTACTAAGCGCAAGATCGAGGAGGCCAAGCGTAGCAC
CGAGCCTCCCGCTGATGCTGTTGACGATGCTGCTGGTGCTTCCCGTGGTG
GTGGCGGTATGCCTGATCTGTCTTCCCTTGCTAGCATGCTGGGAGGTGGA
GGTGGCGGCGGCGGTATGCCCGACCTCAGCTCTATCATGAGCAACCCCAT
GTTCGCCAGCATGGCCCAGAACCTGATGAGCAACCCCGATATGCTCAACA
ACCTCATGAGCAACCCCCAGCTGAGACAGATGGCTGAAAACTATGGCCGT
GGCGGTGGTATGCCCGACATGTCCTCTTTGATGAGCGATCCCAACATTGC
CGATATGGCTCGTAACATGATGGGCGGCGGTGCCGGACGTGGAAACCAGT
AAATGGCTCCCACAGAGTCCAAGAAGCGCCTCGCGCTCGCCATCATTGAC
TTCCTCGGTGCCAGCTTGAAGGATGGCACCCTTACCGCCGACGATGCCGA
ATCCATCGAGATCGCCCAGTCCTGTATCGCCGACACCTTCAAGGTTGACC
CCTCCAACGAGGCTGCTGTGAAGGATGCCGTGGGTGGACAGTCTCTGGCC
AGCATCTACAGTGTCTACGAGAAGCTTCGCAACAAGCCCACCGGCGACTC
TGCCAAGGCTGGCGAAAGCCAGAAGCCTGCGGCTGGCGCTCCCACCCCCG
AGTCCGATAAGCTGAAGTCCGAGGGTAACGGTGCCATGGCCCGCAAGGAC
TACAGCACCGCTATTGACCTCTACACCCAAGCCCTGGCTATTGCTCCCTC
GAACCCCATCTACCTCTCCAACCGGGCTGCTGCCTATTCCGCGGCCGGAC
AGCACGAGAAGGCGGCCGAGGATGCCGAGCTCGCCACTGCTGTTGACCCC
AAGTACTCCAAGGCCTGGAGCCGTCTGGGACTGGCTCGTTTCGACTTGGC
TGATTACCACGGTGCCAAGGAGGCCTATGAGAAGGGTATCGAGGCTGAGG
GCAACGGCGGCAGCGAGGCCATGAAGCGGGGTCTGGAGACTACTAAGCGC
AAGATCGAGGAGGCCAAGCGTAGCACCGAGCCTCCCGCTGATGCTGTTGA
CGATGCTGCTGGTGCTTCCCGTGGTGGTGGCGGTATGCCTGATCTGTCTT
CCCTTGCTAGCATGCTGGGAGGTGGAGGTGGCGGCGGCGGTATGCCCGAC
CTCAGCTCTATCATGAGCAACCCCATGTTCGCCAGCATGGCCCAGAACCT
GATGAGCAACCCCGATATGCTCAACAACCTCATGAGCAACCCCCAGCTGA
GACAGATGGCTGAAAACTATGGCCGTGGCGGTGGTATGCCCGACATGTCC
TCTTTGATGAGCGATCCCAACATTGCCGATATGGCTCGTAACATGATGGG
CGGCGGTGCCGGACGTGGAAACCAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011932KJC3_011932Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011932-T1KJC3_011932-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011932-T1.utr5p1KJC3_011932-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011932-T1.exon1KJC3_011932-T1.exon1Aspergillus niger KJC3exon
KJC3_011932-T1.exon2KJC3_011932-T1.exon2Aspergillus niger KJC3exon
KJC3_011932-T1.exon3KJC3_011932-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011932-T1.cdsKJC3_011932-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011932-T1.utr3p1KJC3_011932-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR013026
DBxrefInterPro:IPR032374
DBxrefInterPro:IPR011990
DBxrefInterPro:IPR019734
DBxrefInterPro:IPR006636
DBxrefPFAM:PF13181
DBxrefPFAM:PF16546
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:2056764..2058115 +
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