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KJC3_011940-T1, KJC3_011940-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_011940-T1
Unique NameKJC3_011940-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:2074778..2076035-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_011940-T1 ID=KJC3_011940-T1|Name=KJC3_011940-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1258bp|location=Sequence derived from alignment at ch8:2074778..2076035- (Aspergillus niger KJC3)
AAAGCAAAGACGCCCGTGACGTTGCTCCGCCGCCCTTTACGATCTTGTCG
CGCTGGATTCATTGTTGGACGCTTTTGCAGATCTTACGGCTATTGTATTG
TACGCTCCGTCACAATCCCGGCGCTTTTATTCGACGACCACCTGCTAGCT
TTGCGTACTACTCCCGCCAAAGCGATCGACCATGTCGTCTGGGTTCGTAT
CTGCCGGAACGGATCAGGAGCCAATCGAACGCGACGATGAATGGCGTCGT
GTGCAAAATGAGCTCGAGGAGGAGCGAAAGCGCAAAGCAGAGCTAGGGAG
GCAGGAAGATGGCAAAAGCTTATACGAAGTACTGCAGCAGAACAAAAGTG
AGTCTCCACATTGTGCGGAGATGCCATGAGGCGCGTGTACTAGAGACGCC
TTAGATTGACATGTTAGGGTGATGTGTTTTGTCGCGCAAAGTGGCCAAGC
AGGAAGCTTTCGAAGAGAAGATCAAGTTGAAGAATCAATTCCGTTCGCTG
GACGAAGACGAAGTCGAATTCCTCGATTCCATCATGGAGTCCACCCGGGC
TAAGGAAGCTGCGGTCAAGAAGGAGACTGCCGAACAGCTTGAGTTGTTCC
GTCAACAGCGGGAAGAAGCAGAGAAAGCTTTACTGGAGGATACATCTGCG
GATGTCGCACCGGTCGCTGAAGGAGAGGACTGGAAAATTCCTGCCCGCAA
GAGACGCCGAGAGAAGAGCAAAGACCTTCTCATACCTGGCAAAAAGCGCA
AGTCTCTTGGAGGTGACAATACTGGAAACCTTGCGACAGAACTAAGTGCG
GACAAAGAATCCAGGAATACTGTCCCTGAAAGCATGCCGGAGTCAGCGCA
AGAGAAGCCGGAAGTGCCAAAGCAACCAATTATATCTCCTGGAGCAAAAA
AGCCTGTACAGGATTCAAAACCAAGTCCAAAACAGACTGCATCGAACACA
ACAGCAAAAGCACCTTCATTATCCCTTGGATTAGCCGACTACGGCTCAGA
TTCAGAATGATCTCCTAGGCAGATTGTGCAATAAGCATTTGGTGTTTCTT
CTCTTTACATTCGTGCTCTCTATCGCTTGATTTTCTGCGCCTACAGTCTG
CTGGAGCGGTATCAATGTAACTGTTGCCTCGCTGCCCTGAGCTTGAAGGG
CTCTCTATCCTGCACTGAAACATCACCAACGGGGCCTTTGGATCACTAAA
AGTGTTTAGGTCTTATCTATATCCATATTCTATAATAATATTACACGTTA
AAGATTTA
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Coding sequence (CDS) from alignment at ch8:2074778..2076035-

>KJC3_011940-T1 ID=KJC3_011940-T1|Name=KJC3_011940-T1|organism=Aspergillus niger KJC3|type=CDS|length=1470bp|location=Sequence derived from alignment at ch8:2074778..2076035- (Aspergillus niger KJC3)
TGGCCAAGCAGGAAGCTTTCGAAGAGAAGATCAAGTTGAAGAATCAATTC
CGTTCGCTGGACGAAGACGAAGTCGAATTCCTCGATTCCATCATGGAGTC
CACCCGGGCTAAGGAAGCTGCGGTCAAGAAGGAGACTGCCGAACAGCTTG
AGTTGTTCCGTCAACAGCGGGAAGAAGCAGAGAAAGCTTTACTGGAGGAT
ACATCTGCGGATGTCGCACCGGTCGCTGAAGGAGAGGACTGGAAAATTCC
TGCCCGCAAGAGACGCCGAGAGAAGAGCAAAGACCTTCTCATACCTGGCA
AAAAGCGCAAGTCTCTTGGAGGTGACAATACTGGAAACCTTGCGACAGAA
CTAAGTGCGGACAAAGAATCCAGGAATACTGTCCCTGAAAGCATGCCGGA
GTCAGCGCAAGAGAAGCCGGAAGTGCCAAAGCAACCAATTATATCTCCTG
GAGCAAAAAAGCCTGTACAGGATTCAAAACCAAGTCCAAAACAGACTGCA
TCGAACACAACAGCAAAAGCACCTTCATTATCCCTTGGATTAGCCGACTA
CGGCTCAGATTCAGAATGAATGTCGTCTGGGTTCGTATCTGCCGGAACGG
ATCAGGAGCCAATCGAACGCGACGATGAATGGCGTCGTGTGCAAAATGAG
CTCGAGGAGGAGCGAAAGCGCAAAGCAGAGCTAGGGAGGCAGGAAGATGG
CAAAAGCTTATACGAAGTACTGCAGCAGAACAAAATGGCCAAGCAGGAAG
CTTTCGAAGAGAAGATCAAGTTGAAGAATCAATTCCGTTCGCTGGACGAA
GACGAAGTCGAATTCCTCGATTCCATCATGGAGTCCACCCGGGCTAAGGA
AGCTGCGGTCAAGAAGGAGACTGCCGAACAGCTTGAGTTGTTCCGTCAAC
AGCGGGAAGAAGCAGAGAAAGCTTTACTGGAGGATACATCTGCGGATGTC
GCACCGGTCGCTGAAGGAGAGGACTGGAAAATTCCTGCCCGCAAGAGACG
CCGAGAGAAGAGCAAAGACCTTCTCATACCTGGCAAAAAGCGCAAGTCTC
TTGGAGGTGACAATACTGGAAACCTTGCGACAGAACTAAGTGCGGACAAA
GAATCCAGGAATACTGTCCCTGAAAGCATGCCGGAGTCAGCGCAAGAGAA
GCCGGAAGTGCCAAAGCAACCAATTATATCTCCTGGAGCAAAAAAGCCTG
TACAGGATTCAAAACCAAGTCCAAAACAGACTGCATCGAACACAACAGCA
AAAGCACCTTCATTATCCCTTGGATTAGCCGACTACGGCTCAGATTCAGA
ATGAATGTCGTCTGGGTTCGTATCTGCCGGAACGGATCAGGAGCCAATCG
AACGCGACGATGAATGGCGTCGTGTGCAAAATGAGCTCGAGGAGGAGCGA
AAGCGCAAAGCAGAGCTAGGGAGGCAGGAAGATGGCAAAAGCTTATACGA
AGTACTGCAGCAGAACAAAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_011940KJC3_011940Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011940-T1KJC3_011940-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011940-T1.cdsKJC3_011940-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011940-T1.utr3p1KJC3_011940-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011940-T1.exon2KJC3_011940-T1.exon2Aspergillus niger KJC3exon
KJC3_011940-T1.exon1KJC3_011940-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_011940-T1.utr5p1KJC3_011940-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR019331
DBxrefPFAM:PF10187
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:2074778..2076035 -
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