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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2135754..2137674- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_011967-T1 ID=KJC3_011967-T1|Name=KJC3_011967-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1921bp|location=Sequence derived from alignment at ch8:2135754..2137674- (Aspergillus niger KJC3)
GCGGGTTAGAAGAGGAGAGCAAGAGGAATGGAAGAAAGACAGGACAAAGA
AGCTCCCTTTGCCCCGTTTACGAACAACGACTTTGCCCATTGAGACCAGC
TCTTTCATGGCGGTTGTTTGTTTCAAAATCTCTTAAGTACCACCCTTCTT
CCTTCCTAGGGTTCGAATTTCCTTCTCTCATCACTCAGCTCTTGGGAAAG
AGAATCCCTTCAAGTTCGAAATTCATCATCGTCCCAGCGTAATGGGGAAA
GGAAAGGAAGTAAAGGTGAGCATTTCAACCTCGAAAGTTCTGTATTCGTC
AGCTGGTCTCTGAATTCTCCCACTCCTCATTGAAGGAACCATCCTCCAAA
GCACCCTCGCCGTCCCATGTCCACGAAGACACGGACTTGGCTCCAACCCT
AGAAGAGTCAGGGGGTAATAAAGATATCGATGCACTCCAGGTCAAGATCG
ATCATCTCCAGGCTGAAGTCGAGGAGTTGAAGAAGGACCGTCGAGAAAAA
TGGTCGTGGGCAGGCTCCGGGGGACGCGGCTGGCAAAGACCCACCATCGA
ATATGGAGATGCGTTTACCAAGCTTTTCATCGAGGCTAAAATATGGGCCG
ACCATTACGTGAAAAGGGATACGGCTGCGCTGGCAGAATTCTCTTTTAGT
GAGAAACAAAGTATTCTTCAGAGCCTGGATGGCTATTGCGTACAGGATTT
GGACTGGGATACTCTTATAGGGTCTCTGCCGTATCCAATCCGTACCCAAG
TGCCCCATGCCATCGGCCGAACGATGCTCGTAAAGGACATAGTCGATAAA
TTCTTCGAGAATCCCTTTTGGTATTTTGAGGGAAAGACGGACCCGATAGA
CGTTGAGCCTCGAACACAGAGCTCGCTGTCATTTGCAAAACACCTGCAGC
ATCTATATGAGCAATTCCTGATCGGTGAGGCCACCAATCCCTTCACTCAC
CCAGGTTCAATGACCGCCTCGTCTCACCACTGACTTGTTATTGAATAGTG
AATCCCAAATCTGCCAGCCTTTGGAAGACCGAGACGGTTCGTCTTGCGAA
CTCCGTCAATGATAACCAGGCCAATAACACTGAGATGGGCCGGCATACAA
AGAGTCGACGTGAGGGCTTGGCTCGATCATTCGCTTGCGCCATGCTGAAA
CACCCACCATTCCAAATGCTACTTGAAAACTGTGAAGATACCGCTGTTCG
GGAGGCAAAGCTTGTCAAATTCTACGAGAGAGCTGAGCGGTTGGCTATCA
GCCTCGGCTCTTCTCATGGTATCTGCACGTATCGAACCCTTACAAAGTTG
GCCTCGCCCTTGTTCTGGCGAGGCGATCTATCCGTGACTGCAGAGTACCG
TCATGTTCTTATGCCGCACCAGCCTAGACTGGACGGGCATCGAATTCTGC
TCATCTTGCAGCCTGCAGTGTCACGCATTGGAGCGGCAGTCCCTGACGGT
CACTTAGAATCATGGACTCAAGCTGTCGCAGTGATTGAGGATGGCGACTG
TACAGAAGAAGTGTATCACGAGTTGCAACAAGAACGGGAAGCTGAGGCGC
ATGAAGTCTACAGAGAGAGGCAGGAAACACTGGCGAAGCACCGGGCTGAA
TGGGAACGAGAACGGCAGGAGAAGCAAAAAGAGGGCAAAAGAGTGGAGGA
AGAGACACAGAGAGAAGACGAGGGAAAGATTATAGAAGGAAGCCCAGTGA
AGCAAGAGAATGACGAAGAAGCAGATGAAGATATAGAAAGACCGGCACCC
AAACGAGCACGCAGGACAAGAGGGGCAACAGGGGCAACAGGGGCAACAGG
GGCAACAGGGGCAACAGGGGCAACAGGGAAGAAGGCAGGCCAGCAGATGA
AAGAGGAGAAAGGGGACGCGAAGAAGAAAACAAGAGGGCGTCGGGTAAAG
AGAGGAAAGACGACCAAATGA back to topCoding sequence (CDS) from alignment at ch8:2135754..2137674- >KJC3_011967-T1 ID=KJC3_011967-T1|Name=KJC3_011967-T1|organism=Aspergillus niger KJC3|type=CDS|length=4293bp|location=Sequence derived from alignment at ch8:2135754..2137674- (Aspergillus niger KJC3)
TGAATCCCAAATCTGCCAGCCTTTGGAAGACCGAGACGGTTCGTCTTGCG
AACTCCGTCAATGATAACCAGGCCAATAACACTGAGATGGGCCGGCATAC
AAAGAGTCGACGTGAGGGCTTGGCTCGATCATTCGCTTGCGCCATGCTGA
AACACCCACCATTCCAAATGCTACTTGAAAACTGTGAAGATACCGCTGTT
CGGGAGGCAAAGCTTGTCAAATTCTACGAGAGAGCTGAGCGGTTGGCTAT
CAGCCTCGGCTCTTCTCATGGTATCTGCACGTATCGAACCCTTACAAAGT
TGGCCTCGCCCTTGTTCTGGCGAGGCGATCTATCCGTGACTGCAGAGTAC
CGTCATGTTCTTATGCCGCACCAGCCTAGACTGGACGGGCATCGAATTCT
GCTCATCTTGCAGCCTGCAGTGTCACGCATTGGAGCGGCAGTCCCTGACG
GTCACTTAGAATCATGGACTCAAGCTGTCGCAGTGATTGAGGATGGCGAC
TGTACAGAAGAAGTGTATCACGAGTTGCAACAAGAACGGGAAGCTGAGGC
GCATGAAGTCTACAGAGAGAGGCAGGAAACACTGGCGAAGCACCGGGCTG
AATGGGAACGAGAACGGCAGGAGAAGCAAAAAGAGGGCAAAAGAGTGGAG
GAAGAGACACAGAGAGAAGACGAGGGAAAGATTATAGAAGGAAGCCCAGT
GAAGCAAGAGAATGACGAAGAAGCAGATGAAGATATAGAAAGACCGGCAC
CCAAACGAGCACGCAGGACAAGAGGGGCAACAGGGGCAACAGGGGCAACA
GGGGCAACAGGGGCAACAGGGGCAACAGGGAAGAAGGCAGGCCAGCAGAT
GAAAGAGGAGAAAGGGGACGCGAAGAAGAAAACAAGAGGGCGTCGGGTAA
AGAGAGGAAAGACGACCAAATGAGTCAAGATCGATCATCTCCAGGCTGAA
GTCGAGGAGTTGAAGAAGGACCGTCGAGAAAAATGGTCGTGGGCAGGCTC
CGGGGGACGCGGCTGGCAAAGACCCACCATCGAATATGGAGATGCGTTTA
CCAAGCTTTTCATCGAGGCTAAAATATGGGCCGACCATTACGTGAAAAGG
GATACGGCTGCGCTGGCAGAATTCTCTTTTAGTGAGAAACAAAGTATTCT
TCAGAGCCTGGATGGCTATTGCGTACAGGATTTGGACTGGGATACTCTTA
TAGGGTCTCTGCCGTATCCAATCCGTACCCAAGTGCCCCATGCCATCGGC
CGAACGATGCTCGTAAAGGACATAGTCGATAAATTCTTCGAGAATCCCTT
TTGGTATTTTGAGGGAAAGACGGACCCGATAGACGTTGAGCCTCGAACAC
AGAGCTCGCTGTCATTTGCAAAACACCTGCAGCATCTATATGAGCAATTC
CTGATCGATGGGGAAAGGAAAGGAAGTAAAGTGAATCCCAAATCTGCCAG
CCTTTGGAAGACCGAGACGGTTCGTCTTGCGAACTCCGTCAATGATAACC
AGGCCAATAACACTGAGATGGGCCGGCATACAAAGAGTCGACGTGAGGGC
TTGGCTCGATCATTCGCTTGCGCCATGCTGAAACACCCACCATTCCAAAT
GCTACTTGAAAACTGTGAAGATACCGCTGTTCGGGAGGCAAAGCTTGTCA
AATTCTACGAGAGAGCTGAGCGGTTGGCTATCAGCCTCGGCTCTTCTCAT
GGTATCTGCACGTATCGAACCCTTACAAAGTTGGCCTCGCCCTTGTTCTG
GCGAGGCGATCTATCCGTGACTGCAGAGTACCGTCATGTTCTTATGCCGC
ACCAGCCTAGACTGGACGGGCATCGAATTCTGCTCATCTTGCAGCCTGCA
GTGTCACGCATTGGAGCGGCAGTCCCTGACGGTCACTTAGAATCATGGAC
TCAAGCTGTCGCAGTGATTGAGGATGGCGACTGTACAGAAGAAGTGTATC
ACGAGTTGCAACAAGAACGGGAAGCTGAGGCGCATGAAGTCTACAGAGAG
AGGCAGGAAACACTGGCGAAGCACCGGGCTGAATGGGAACGAGAACGGCA
GGAGAAGCAAAAAGAGGGCAAAAGAGTGGAGGAAGAGACACAGAGAGAAG
ACGAGGGAAAGATTATAGAAGGAAGCCCAGTGAAGCAAGAGAATGACGAA
GAAGCAGATGAAGATATAGAAAGACCGGCACCCAAACGAGCACGCAGGAC
AAGAGGGGCAACAGGGGCAACAGGGGCAACAGGGGCAACAGGGGCAACAG
GGGCAACAGGGAAGAAGGCAGGCCAGCAGATGAAAGAGGAGAAAGGGGAC
GCGAAGAAGAAAACAAGAGGGCGTCGGGTAAAGAGAGGAAAGACGACCAA
ATGAGTCAAGATCGATCATCTCCAGGCTGAAGTCGAGGAGTTGAAGAAGG
ACCGTCGAGAAAAATGGTCGTGGGCAGGCTCCGGGGGACGCGGCTGGCAA
AGACCCACCATCGAATATGGAGATGCGTTTACCAAGCTTTTCATCGAGGC
TAAAATATGGGCCGACCATTACGTGAAAAGGGATACGGCTGCGCTGGCAG
AATTCTCTTTTAGTGAGAAACAAAGTATTCTTCAGAGCCTGGATGGCTAT
TGCGTACAGGATTTGGACTGGGATACTCTTATAGGGTCTCTGCCGTATCC
AATCCGTACCCAAGTGCCCCATGCCATCGGCCGAACGATGCTCGTAAAGG
ACATAGTCGATAAATTCTTCGAGAATCCCTTTTGGTATTTTGAGGGAAAG
ACGGACCCGATAGACGTTGAGCCTCGAACACAGAGCTCGCTGTCATTTGC
AAAACACCTGCAGCATCTATATGAGCAATTCCTGATCGATGGGGAAAGGA
AAGGAAGTAAAGTGAATCCCAAATCTGCCAGCCTTTGGAAGACCGAGACG
GTTCGTCTTGCGAACTCCGTCAATGATAACCAGGCCAATAACACTGAGAT
GGGCCGGCATACAAAGAGTCGACGTGAGGGCTTGGCTCGATCATTCGCTT
GCGCCATGCTGAAACACCCACCATTCCAAATGCTACTTGAAAACTGTGAA
GATACCGCTGTTCGGGAGGCAAAGCTTGTCAAATTCTACGAGAGAGCTGA
GCGGTTGGCTATCAGCCTCGGCTCTTCTCATGGTATCTGCACGTATCGAA
CCCTTACAAAGTTGGCCTCGCCCTTGTTCTGGCGAGGCGATCTATCCGTG
ACTGCAGAGTACCGTCATGTTCTTATGCCGCACCAGCCTAGACTGGACGG
GCATCGAATTCTGCTCATCTTGCAGCCTGCAGTGTCACGCATTGGAGCGG
CAGTCCCTGACGGTCACTTAGAATCATGGACTCAAGCTGTCGCAGTGATT
GAGGATGGCGACTGTACAGAAGAAGTGTATCACGAGTTGCAACAAGAACG
GGAAGCTGAGGCGCATGAAGTCTACAGAGAGAGGCAGGAAACACTGGCGA
AGCACCGGGCTGAATGGGAACGAGAACGGCAGGAGAAGCAAAAAGAGGGC
AAAAGAGTGGAGGAAGAGACACAGAGAGAAGACGAGGGAAAGATTATAGA
AGGAAGCCCAGTGAAGCAAGAGAATGACGAAGAAGCAGATGAAGATATAG
AAAGACCGGCACCCAAACGAGCACGCAGGACAAGAGGGGCAACAGGGGCA
ACAGGGGCAACAGGGGCAACAGGGGCAACAGGGGCAACAGGGAAGAAGGC
AGGCCAGCAGATGAAAGAGGAGAAAGGGGACGCGAAGAAGAAAACAAGAG
GGCGTCGGGTAAAGAGAGGAAAGACGACCAAATGAGTCAAGATCGATCAT
CTCCAGGCTGAAGTCGAGGAGTTGAAGAAGGACCGTCGAGAAAAATGGTC
GTGGGCAGGCTCCGGGGGACGCGGCTGGCAAAGACCCACCATCGAATATG
GAGATGCGTTTACCAAGCTTTTCATCGAGGCTAAAATATGGGCCGACCAT
TACGTGAAAAGGGATACGGCTGCGCTGGCAGAATTCTCTTTTAGTGAGAA
ACAAAGTATTCTTCAGAGCCTGGATGGCTATTGCGTACAGGATTTGGACT
GGGATACTCTTATAGGGTCTCTGCCGTATCCAATCCGTACCCAAGTGCCC
CATGCCATCGGCCGAACGATGCTCGTAAAGGACATAGTCGATAAATTCTT
CGAGAATCCCTTTTGGTATTTTGAGGGAAAGACGGACCCGATAGACGTTG
AGCCTCGAACACAGAGCTCGCTGTCATTTGCAAAACACCTGCAGCATCTA
TATGAGCAATTCCTGATCGATGGGGAAAGGAAAGGAAGTAAAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_011967-T1.utr5p1 | KJC3_011967-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2135754..2137674 - |
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