|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:2299188..2300430+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012010-T1 ID=KJC3_012010-T1|Name=KJC3_012010-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1243bp|location=Sequence derived from alignment at ch8:2299188..2300430+ (Aspergillus niger KJC3)
ATGAAGCTCTCCAGTCTTACACCTCTCGCCCTGGCTCTCACAGCCACCGC
CCAAGCCTCCTACATCAACTACACCACCGTGACCGGCTACTTCCTCCAAG
ACGAGGACTCCACCGATGCATCCACCTTCGACTATGTAAGATAACACATA
ATCCTCCTGCCTCCATTTCCATTCCCTCTCCCCACAACCCACTAACCTTT
CCTTCCCGGACTATTAACTAGACAACCACCAACTTCGGCCTCATCAACCG
CACCTACCCCTCCGACAACACCCACAACCACCACCAAGACCTAACCCAAT
GGGAACGCTTCTACCACTACGTCCTCTCCCTAAACCACAACTCCCCCTCC
AACGTCGCATACAAAGTCCTCTTCCTCGGCCGCCACGGTGAAGGATACCA
CAACGCCGCGGAAGATTACTACGGCACGCCTGCTTGGAATGTAAGCCCCC
CCTCCTCTCCCCACACCCTCTTCCCCGCACTCCCACCCAAACTAACTACG
TACGTATGTCCTAGTGCTACTGGTCCCTCCTAACCGGCAACGGAACCACC
ACCTGGCTGGACGCAGACCTCACCCCGACAGGGATCCAACAAGCGCAAAT
CGCGCACGATTTCTGGAACATCCAGATAAGCGCGCAGCGCATCCACACAC
CGGATAGTTACTTCGTTAGCCCACTGCTTCGGGCGCTCCGCACAGCGAAT
ATCACATTCTCGGACCTATCCTTGGGAACTCCATTCATCCCAGAAATAAA
GGAATTCTTCCGGGAGAGTATATCCATTCATACGTGCGATCATCGTCACA
ACGCAAGTCACATCCATTCCGTGTTCCCTACATGGCCCTTCGAGAAGGGG
TTCGCTGAAGACGATGAGTTATGGAATGGAGTGACTGGGGAGACGAGCGC
GGCGCAGGATGTGAGGAGTCGGAGGGCGTTGGATGATGTGTTTGGTGGGG
AGGAGAAGAATGGGGTGTTTGTGAGTGTGACGAGTCATTCCGGGGAGATA
GCGAGTTTGTTGAGGGTCGTTGGACATAGGGTTTTTGGGCTCAGGACCGG
TGCGGTGATTCCTGTGCTGGTGAAGGGGGAGATTGTGGGGGATAGTGAGG
TTGAGCCAACGGTTACGGGGACGGTTTCTTGGACGACGAGTGCGCATTGT
ACGGCGCCGCCGGTTACTTCTGTTAGTTCGGGGTGCGTGTGTGCGTCTTC
GGCAGCGCCGGTGACAACGCCGTTGGTGACGGTTGCTTATTAG back to topCoding sequence (CDS) from alignment at ch8:2299188..2300430+ >KJC3_012010-T1 ID=KJC3_012010-T1|Name=KJC3_012010-T1|organism=Aspergillus niger KJC3|type=CDS|length=3249bp|location=Sequence derived from alignment at ch8:2299188..2300430+ (Aspergillus niger KJC3)
ATGAAGCTCTCCAGTCTTACACCTCTCGCCCTGGCTCTCACAGCCACCGC
CCAAGCCTCCTACATCAACTACACCACCGTGACCGGCTACTTCCTCCAAG
ACGAGGACTCCACCGATGCATCCACCTTCGACTATACAACCACCAACTTC
GGCCTCATCAACCGCACCTACCCCTCCGACAACACCCACAACCACCACCA
AGACCTAACCCAATGGGAACGCTTCTACCACTACGTCCTCTCCCTAAACC
ACAACTCCCCCTCCAACGTCGCATACAAAGTCCTCTTCCTCGGCCGCCAC
GGTGAAGGATACCACAACGCCGCGGAAGATTACTACGGCACGCCTGCTTG
GAATTGCTACTGGTCCCTCCTAACCGGCAACGGAACCACCACCTGGCTGG
ACGCAGACCTCACCCCGACAGGGATCCAACAAGCGCAAATCGCGCACGAT
TTCTGGAACATCCAGATAAGCGCGCAGCGCATCCACACACCGGATAGTTA
CTTCGTTAGCCCACTGCTTCGGGCGCTCCGCACAGCGAATATCACATTCT
CGGACCTATCCTTGGGAACTCCATTCATCCCAGAAATAAAGGAATTCTTC
CGGGAGAGTATATCCATTCATACGTGCGATCATCGTCACAACGCAAGTCA
CATCCATTCCGTGTTCCCTACATGGCCCTTCGAGAAGGGGTTCGCTGAAG
ACGATGAGTTATGGAATGGAGTGACTGGGGAGACGAGCGCGGCGCAGGAT
GTGAGGAGTCGGAGGGCGTTGGATGATGTGTTTGGTGGGGAGGAGAAGAA
TGGGGTGTTTGTGAGTGTGACGAGTCATTCCGGGGAGATAGCGAGTTTGT
TGAGGGTCGTTGGACATAGGGTTTTTGGGCTCAGGACCGGTGCGGTGATT
CCTGTGCTGGTGAAGGGGGAGATTGTGGGGGATAGTGAGGTTGAGCCAAC
GGTTACGGGGACGGTTTCTTGGACGACGAGTGCGCATTGTACGGCGCCGC
CGGTTACTTCTGTTAGTTCGGGGTGCGTGTGTGCGTCTTCGGCAGCGCCG
GTGACAACGCCGTTGGTGACGGTTGCTTATTAGATGAAGCTCTCCAGTCT
TACACCTCTCGCCCTGGCTCTCACAGCCACCGCCCAAGCCTCCTACATCA
ACTACACCACCGTGACCGGCTACTTCCTCCAAGACGAGGACTCCACCGAT
GCATCCACCTTCGACTATACAACCACCAACTTCGGCCTCATCAACCGCAC
CTACCCCTCCGACAACACCCACAACCACCACCAAGACCTAACCCAATGGG
AACGCTTCTACCACTACGTCCTCTCCCTAAACCACAACTCCCCCTCCAAC
GTCGCATACAAAGTCCTCTTCCTCGGCCGCCACGGTGAAGGATACCACAA
CGCCGCGGAAGATTACTACGGCACGCCTGCTTGGAATTGCTACTGGTCCC
TCCTAACCGGCAACGGAACCACCACCTGGCTGGACGCAGACCTCACCCCG
ACAGGGATCCAACAAGCGCAAATCGCGCACGATTTCTGGAACATCCAGAT
AAGCGCGCAGCGCATCCACACACCGGATAGTTACTTCGTTAGCCCACTGC
TTCGGGCGCTCCGCACAGCGAATATCACATTCTCGGACCTATCCTTGGGA
ACTCCATTCATCCCAGAAATAAAGGAATTCTTCCGGGAGAGTATATCCAT
TCATACGTGCGATCATCGTCACAACGCAAGTCACATCCATTCCGTGTTCC
CTACATGGCCCTTCGAGAAGGGGTTCGCTGAAGACGATGAGTTATGGAAT
GGAGTGACTGGGGAGACGAGCGCGGCGCAGGATGTGAGGAGTCGGAGGGC
GTTGGATGATGTGTTTGGTGGGGAGGAGAAGAATGGGGTGTTTGTGAGTG
TGACGAGTCATTCCGGGGAGATAGCGAGTTTGTTGAGGGTCGTTGGACAT
AGGGTTTTTGGGCTCAGGACCGGTGCGGTGATTCCTGTGCTGGTGAAGGG
GGAGATTGTGGGGGATAGTGAGGTTGAGCCAACGGTTACGGGGACGGTTT
CTTGGACGACGAGTGCGCATTGTACGGCGCCGCCGGTTACTTCTGTTAGT
TCGGGGTGCGTGTGTGCGTCTTCGGCAGCGCCGGTGACAACGCCGTTGGT
GACGGTTGCTTATTAGATGAAGCTCTCCAGTCTTACACCTCTCGCCCTGG
CTCTCACAGCCACCGCCCAAGCCTCCTACATCAACTACACCACCGTGACC
GGCTACTTCCTCCAAGACGAGGACTCCACCGATGCATCCACCTTCGACTA
TACAACCACCAACTTCGGCCTCATCAACCGCACCTACCCCTCCGACAACA
CCCACAACCACCACCAAGACCTAACCCAATGGGAACGCTTCTACCACTAC
GTCCTCTCCCTAAACCACAACTCCCCCTCCAACGTCGCATACAAAGTCCT
CTTCCTCGGCCGCCACGGTGAAGGATACCACAACGCCGCGGAAGATTACT
ACGGCACGCCTGCTTGGAATTGCTACTGGTCCCTCCTAACCGGCAACGGA
ACCACCACCTGGCTGGACGCAGACCTCACCCCGACAGGGATCCAACAAGC
GCAAATCGCGCACGATTTCTGGAACATCCAGATAAGCGCGCAGCGCATCC
ACACACCGGATAGTTACTTCGTTAGCCCACTGCTTCGGGCGCTCCGCACA
GCGAATATCACATTCTCGGACCTATCCTTGGGAACTCCATTCATCCCAGA
AATAAAGGAATTCTTCCGGGAGAGTATATCCATTCATACGTGCGATCATC
GTCACAACGCAAGTCACATCCATTCCGTGTTCCCTACATGGCCCTTCGAG
AAGGGGTTCGCTGAAGACGATGAGTTATGGAATGGAGTGACTGGGGAGAC
GAGCGCGGCGCAGGATGTGAGGAGTCGGAGGGCGTTGGATGATGTGTTTG
GTGGGGAGGAGAAGAATGGGGTGTTTGTGAGTGTGACGAGTCATTCCGGG
GAGATAGCGAGTTTGTTGAGGGTCGTTGGACATAGGGTTTTTGGGCTCAG
GACCGGTGCGGTGATTCCTGTGCTGGTGAAGGGGGAGATTGTGGGGGATA
GTGAGGTTGAGCCAACGGTTACGGGGACGGTTTCTTGGACGACGAGTGCG
CATTGTACGGCGCCGCCGGTTACTTCTGTTAGTTCGGGGTGCGTGTGTGC
GTCTTCGGCAGCGCCGGTGACAACGCCGTTGGTGACGGTTGCTTATTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-19) |
| DBxref | InterPro:IPR029033 |
| DBxref | InterPro:IPR013078 |
| DBxref | PFAM:PF00300 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:2299188..2300430 + |
|
