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KJC3_012100-T1, KJC3_012100-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012100-T1
Unique NameKJC3_012100-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:2567789..2568683+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012100-T1 ID=KJC3_012100-T1|Name=KJC3_012100-T1|organism=Aspergillus niger KJC3|type=mRNA|length=895bp|location=Sequence derived from alignment at ch8:2567789..2568683+ (Aspergillus niger KJC3)
ATGGGTCTCACTTTCTCCAAGTTGTTCGACCGCCTATGGGGCCGCAAGGA
GATGCGTATTCTGATGGTCGGTCTCGATGCCGCCGGTAAAACCACCATCC
TGTACAAGCTCAAGCTGGGTGAAATTGTCACCACCATCCCCACGATTGGT
CAGTCCTCCTCTTCCTCCTCCCTCTCCTCGGTCCAGACACAGCAGAACTT
GGCATCGATCAGTTGTTGGGCTTGGCTCAATACCGGAACGGAATGATATC
GAACATGGAACGCAAATCAATTCACGATGAGAGAACACAAAACTGACTGG
TGTTGTTCTGTGCTGTGCAGGTTTCAACGTCGAGACCGTCGAATACAAGA
ACATTCAGTTCACCGTCTGGGACGTCGGTGGTCAGGACAAGATCCGTCCT
CTCTGGAGACACTACTTCCAGAACACCCAGGGTATCATTTTCGTTGTCGA
CAGCAATGACCGTGACCGTATCGTCGAGGCCCGTGAGGAGTTGCAGCGCA
TGTTGAACGAGGATGAACTCCGTGACGCCCTTCTCCTGGTGTTCGCCAAC
AAGCAAGATTTGCCGGTATGCTTGAAATCCACTTCTTGTGCAACAATGTG
GGGGCCGAAACAATGGATATTGACCGTGTGATTTCTTTTTCTTCTAGAAC
GCCATGAGCCCTGCCGAGATCACTCAGCAGCTTGGTCTGCAGAGCCTCAC
CCGCCGTCCCTGGGTAAGTTATACCCCCCTCGCATGTCGACACCTGAGGT
GTCTATTCCCGAGGATCGAACCCCAACTAACGCGCTTGCTTCCCTTTTCT
AGTACATCCAATCCACCTGCGCCACGACTGGTGACGGTCTGTACGAGGGT
CTGGAGTGGCTTGCTGAGACGCTGCGGAAAACGAACCGCGACTAA
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Coding sequence (CDS) from alignment at ch8:2567789..2568683+

>KJC3_012100-T1 ID=KJC3_012100-T1|Name=KJC3_012100-T1|organism=Aspergillus niger KJC3|type=CDS|length=2208bp|location=Sequence derived from alignment at ch8:2567789..2568683+ (Aspergillus niger KJC3)
ATGGGTCTCACTTTCTCCAAGTTGTTCGACCGCCTATGGGGCCGCAAGGA
GATGCGTATTCTGATGGTCGGTCTCGATGCCGCCGGTAAAACCACCATCC
TGTACAAGCTCAAGCTGGGTGAAATTGTCACCACCATCCCCACGATTGGT
TTCAACGTCGAGACCGTCGAATACAAGAACATTCAGTTCACCGTCTGGGA
CGTCGGTGGTCAGGACAAGATCCGTCCTCTCTGGAGACACTACTTCCAGA
ACACCCAGGGTATCATTTTCGTTGTCGACAGCAATGACCGTGACCGTATC
GTCGAGGCCCGTGAGGAGTTGCAGCGCATGTTGAACGAGGATGAACTCCG
TGACGCCCTTCTCCTGGTGTTCGCCAACAAGCAAGATTTGCCGAACGCCA
TGAGCCCTGCCGAGATCACTCAGCAGCTTGGTCTGCAGAGCCTCACCCGC
CGTCCCTGGTACATCCAATCCACCTGCGCCACGACTGGTGACGGTCTGTA
CGAGGGTCTGGAGTGGCTTGCTGAGACGCTGCGGAAAACGAACCGCGACT
AAATGGGTCTCACTTTCTCCAAGTTGTTCGACCGCCTATGGGGCCGCAAG
GAGATGCGTATTCTGATGGTCGGTCTCGATGCCGCCGGTAAAACCACCAT
CCTGTACAAGCTCAAGCTGGGTGAAATTGTCACCACCATCCCCACGATTG
GTTTCAACGTCGAGACCGTCGAATACAAGAACATTCAGTTCACCGTCTGG
GACGTCGGTGGTCAGGACAAGATCCGTCCTCTCTGGAGACACTACTTCCA
GAACACCCAGGGTATCATTTTCGTTGTCGACAGCAATGACCGTGACCGTA
TCGTCGAGGCCCGTGAGGAGTTGCAGCGCATGTTGAACGAGGATGAACTC
CGTGACGCCCTTCTCCTGGTGTTCGCCAACAAGCAAGATTTGCCGAACGC
CATGAGCCCTGCCGAGATCACTCAGCAGCTTGGTCTGCAGAGCCTCACCC
GCCGTCCCTGGTACATCCAATCCACCTGCGCCACGACTGGTGACGGTCTG
TACGAGGGTCTGGAGTGGCTTGCTGAGACGCTGCGGAAAACGAACCGCGA
CTAAATGGGTCTCACTTTCTCCAAGTTGTTCGACCGCCTATGGGGCCGCA
AGGAGATGCGTATTCTGATGGTCGGTCTCGATGCCGCCGGTAAAACCACC
ATCCTGTACAAGCTCAAGCTGGGTGAAATTGTCACCACCATCCCCACGAT
TGGTTTCAACGTCGAGACCGTCGAATACAAGAACATTCAGTTCACCGTCT
GGGACGTCGGTGGTCAGGACAAGATCCGTCCTCTCTGGAGACACTACTTC
CAGAACACCCAGGGTATCATTTTCGTTGTCGACAGCAATGACCGTGACCG
TATCGTCGAGGCCCGTGAGGAGTTGCAGCGCATGTTGAACGAGGATGAAC
TCCGTGACGCCCTTCTCCTGGTGTTCGCCAACAAGCAAGATTTGCCGAAC
GCCATGAGCCCTGCCGAGATCACTCAGCAGCTTGGTCTGCAGAGCCTCAC
CCGCCGTCCCTGGTACATCCAATCCACCTGCGCCACGACTGGTGACGGTC
TGTACGAGGGTCTGGAGTGGCTTGCTGAGACGCTGCGGAAAACGAACCGC
GACTAAATGGGTCTCACTTTCTCCAAGTTGTTCGACCGCCTATGGGGCCG
CAAGGAGATGCGTATTCTGATGGTCGGTCTCGATGCCGCCGGTAAAACCA
CCATCCTGTACAAGCTCAAGCTGGGTGAAATTGTCACCACCATCCCCACG
ATTGGTTTCAACGTCGAGACCGTCGAATACAAGAACATTCAGTTCACCGT
CTGGGACGTCGGTGGTCAGGACAAGATCCGTCCTCTCTGGAGACACTACT
TCCAGAACACCCAGGGTATCATTTTCGTTGTCGACAGCAATGACCGTGAC
CGTATCGTCGAGGCCCGTGAGGAGTTGCAGCGCATGTTGAACGAGGATGA
ACTCCGTGACGCCCTTCTCCTGGTGTTCGCCAACAAGCAAGATTTGCCGA
ACGCCATGAGCCCTGCCGAGATCACTCAGCAGCTTGGTCTGCAGAGCCTC
ACCCGCCGTCCCTGGTACATCCAATCCACCTGCGCCACGACTGGTGACGG
TCTGTACGAGGGTCTGGAGTGGCTTGCTGAGACGCTGCGGAAAACGAACC
GCGACTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012100KJC3_012100Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012100-T1.exon1KJC3_012100-T1.exon1Aspergillus niger KJC3exon
KJC3_012100-T1.exon2KJC3_012100-T1.exon2Aspergillus niger KJC3exon
KJC3_012100-T1.exon3KJC3_012100-T1.exon3Aspergillus niger KJC3exon
KJC3_012100-T1.exon4KJC3_012100-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012100-T1.cdsKJC3_012100-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012100-T1KJC3_012100-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR005225
DBxrefInterPro:IPR006689
DBxrefPFAM:PF09439
DBxrefPFAM:PF08477
DBxrefPFAM:PF00071
DBxrefPFAM:PF01926
DBxrefPFAM:PF04670
DBxrefPFAM:PF00025
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:2567789..2568683 +
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