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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:3160253..3162540+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012302-T1 ID=KJC3_012302-T1|Name=KJC3_012302-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2288bp|location=Sequence derived from alignment at ch8:3160253..3162540+ (Aspergillus niger KJC3)
CTTTCTCTCTCGGTTTGATCTTCCCCACGGCATTCCCCTCAGCAATTCCA
ATTACTTGATCTCTTGCGGGTTTGTAATCACTTGCTGCAGCATTCTTCTT
GTCCCGAGCAGCAATCCCTCGGCCACGCCGGGTTGACCTTCGTCTCTTCC
CCGCCTTTGGAATCCATCCCACCGGCTGACCTTGCGCTCGTTCGAATCCG
TCGCTGGTCCAACCCGTTCCAGCCTCTCTTTGTCATTCCACTCGTGGTGT
GCATCCTGGTCCACCTTCGCTTCGAGGGGAAGAACTTGTTTCCTCAGGAG
ACTTGCGCCGCAATTACCTGTGCCCAACACACTACTTATTTCTTTTCTTC
TCTTCTCGTGTTGCGATTGACCGAGTTCTTACCAAAGCCTGCTTGCGGCC
GTGGTACGATCAGACCTACCTGCGGGCGGGGTAAGGCCATTTGCACACTC
ATCTCACCTATAAGCCCAGACCCTCTGCTCGGTTTACTACTCGGCACACT
CTCAGCTGATGCTGCTCTGGGCTAGTTATCATGCCTCTCGATGAAGAAGG
GGCCAAATGGTCTTGGTATGACTCTTTCCGCCGGTGAAGAGGCTCTCTGC
TAACCAGATCCTTCCACTAGTGAGCCATGTATCCGTGGCCATCGGTCCTC
GAAATGCCAGCACTTCGACAGGATGATGATGAAGGTCCCAAAGGCCGGAC
GACCGCTTGCTAGATGCCCTCATCCGAAGGGAACTTGCAGCTGCCAGAAA
CTATATGCGTTCATGATCCGCATCCCCAAAGGTGGGTAAATGCGACGGAT
ATGGCCTATCGTTTATCCTTCGGTTGTAGTCGCGTCTTTGGTGACTGACT
TCGACTGTGCCATGTAGGCTCGACTTGCTTGTGCAGACCAGTGTACCAAG
TGCCTGCTGATGCGGCGGAATCTGCTTCAACCACCCCGATTCCTGCTCCT
CCGATGCCGATTGCTGCTCCCAATAAAATCCAGAAACCCATCAAACGACA
AGTCAAGACGGCCCCAGAGAATCTTACCAAAGCCTTGAACTCCATACCAG
AATTCGGAAACCAGCAATTGGAACATGGAAAATTGGGCCGACCATCGCCT
TATACGGCTCAGGAACAACGTTTGAGCAGTTCATATGATATCATCAAGCA
AGAACCAACTCCCTCGCACAAGGCCTTCGAGCGCGCTAGCGAAGATAAGG
CGCCGCAGGGCGGCAGCTGTTGCTCTCGCAAGCCCCAGCCCTCACAGACT
ATAACTCCGGAGGTTCAAGCTCCCGCGGTTCAACGTTCCTGTTGTAGCAA
GTCCAAGCCGGCGGCTCAAGACGTCGAGATGGAAGGCAGCATTCTTAACA
GTTCTGATTACTTCCACCCTCCAGTCTTTGACAGCGATAACGCAAGATAC
ACCCCGAATTCTATTCCTCAAGTTTCGACATGGCAGGATTTCCAAGCAGC
GAAGCAGAGCCAGTACATGCAGCCTTTTGCATTGCCCGTATCCGAGTCCG
GTTATCTTCCCATGGCCGGACCTGCCGCAGATATTCGTCCTAAGCCACTA
GACTTTCAGCATCCGCCTGCTTTCAACAACTATGATCTCTTCAGCAACCA
GACTTCTCAGCAACCGTCGGAGAATACGCAGAATGTCGTTGCAGATCCAG
AAAGTACTGCTAGCGATGACGCCCATGACTGTAGCTGTGGCGATGGTTGT
CAATGTCTGGGCTGCGCGTCTCACCCGTTCAACAACACTACACGACAGCA
TGTCCAACAAATGGGCCTCCTGGTGGCCCTGAATGATGATGAGCAAAGCC
CCGAAAGGCTGAACAGTCATAGAGGCTCCCCTCTGCAAAGTCAACCACCA
GACTTCTCATCATTACAATATTCCCTCACAAACTTCGGAAATCCTCTGGG
TGAAGGCTTTCACCCTGTTGCAATGCACCCATATGCCCAACAGGGTACGG
ATCCAAGTCACGTAAATAATGGCTATTCTTCTCCACCTGCGGATTATCTA
GGACAGCAGCTCATGGTGCCGTCAGAGTACTATACTCTCGAGTACTCAGT
GGGGCTGCCTAGTGCTTGCGTCGATACAACTGGAAGTTGCCAGTGCGGGA
ATGACTGTACCTGTGTTGGCTGTCTCACCCACAGCGGACACAATGGACTG
CCTCTTGAGCCCGCCATGCCCGAGAGCAACTGGGACCACATGAATCTTCC
AGGTTTCTCCATGGACGCCGCTGGGCACAGCCCGTCGCAGATGCCCGTGA
TGGATAACTTTGTCGCTCATTCGAACTCTATGCTGTAG back to topCoding sequence (CDS) from alignment at ch8:3160253..3162540+ >KJC3_012302-T1 ID=KJC3_012302-T1|Name=KJC3_012302-T1|organism=Aspergillus niger KJC3|type=CDS|length=4851bp|location=Sequence derived from alignment at ch8:3160253..3162540+ (Aspergillus niger KJC3)
ATGCCTCTCGATGAAGAAGGGGCCAAATGGTCTTGTGAGCCATGTATCCG
TGGCCATCGGTCCTCGAAATGCCAGCACTTCGACAGGATGATGATGAAGG
TCCCAAAGGCCGGACGACCGCTTGCTAGATGCCCTCATCCGAAGGGAACT
TGCAGCTGCCAGAAACTATATGCGTTCATGATCCGCATCCCCAAAGGCTC
GACTTGCTTGTGCAGACCAGTGTACCAAGTGCCTGCTGATGCGGCGGAAT
CTGCTTCAACCACCCCGATTCCTGCTCCTCCGATGCCGATTGCTGCTCCC
AATAAAATCCAGAAACCCATCAAACGACAAGTCAAGACGGCCCCAGAGAA
TCTTACCAAAGCCTTGAACTCCATACCAGAATTCGGAAACCAGCAATTGG
AACATGGAAAATTGGGCCGACCATCGCCTTATACGGCTCAGGAACAACGT
TTGAGCAGTTCATATGATATCATCAAGCAAGAACCAACTCCCTCGCACAA
GGCCTTCGAGCGCGCTAGCGAAGATAAGGCGCCGCAGGGCGGCAGCTGTT
GCTCTCGCAAGCCCCAGCCCTCACAGACTATAACTCCGGAGGTTCAAGCT
CCCGCGGTTCAACGTTCCTGTTGTAGCAAGTCCAAGCCGGCGGCTCAAGA
CGTCGAGATGGAAGGCAGCATTCTTAACAGTTCTGATTACTTCCACCCTC
CAGTCTTTGACAGCGATAACGCAAGATACACCCCGAATTCTATTCCTCAA
GTTTCGACATGGCAGGATTTCCAAGCAGCGAAGCAGAGCCAGTACATGCA
GCCTTTTGCATTGCCCGTATCCGAGTCCGGTTATCTTCCCATGGCCGGAC
CTGCCGCAGATATTCGTCCTAAGCCACTAGACTTTCAGCATCCGCCTGCT
TTCAACAACTATGATCTCTTCAGCAACCAGACTTCTCAGCAACCGTCGGA
GAATACGCAGAATGTCGTTGCAGATCCAGAAAGTACTGCTAGCGATGACG
CCCATGACTGTAGCTGTGGCGATGGTTGTCAATGTCTGGGCTGCGCGTCT
CACCCGTTCAACAACACTACACGACAGCATGTCCAACAAATGGGCCTCCT
GGTGGCCCTGAATGATGATGAGCAAAGCCCCGAAAGGCTGAACAGTCATA
GAGGCTCCCCTCTGCAAAGTCAACCACCAGACTTCTCATCATTACAATAT
TCCCTCACAAACTTCGGAAATCCTCTGGGTGAAGGCTTTCACCCTGTTGC
AATGCACCCATATGCCCAACAGGGTACGGATCCAAGTCACGTAAATAATG
GCTATTCTTCTCCACCTGCGGATTATCTAGGACAGCAGCTCATGGTGCCG
TCAGAGTACTATACTCTCGAGTACTCAGTGGGGCTGCCTAGTGCTTGCGT
CGATACAACTGGAAGTTGCCAGTGCGGGAATGACTGTACCTGTGTTGGCT
GTCTCACCCACAGCGGACACAATGGACTGCCTCTTGAGCCCGCCATGCCC
GAGAGCAACTGGGACCACATGAATCTTCCAGGTTTCTCCATGGACGCCGC
TGGGCACAGCCCGTCGCAGATGCCCGTGATGGATAACTTTGTCGCTCATT
CGAACTCTATGCTGTAGATGCCTCTCGATGAAGAAGGGGCCAAATGGTCT
TGTGAGCCATGTATCCGTGGCCATCGGTCCTCGAAATGCCAGCACTTCGA
CAGGATGATGATGAAGGTCCCAAAGGCCGGACGACCGCTTGCTAGATGCC
CTCATCCGAAGGGAACTTGCAGCTGCCAGAAACTATATGCGTTCATGATC
CGCATCCCCAAAGGCTCGACTTGCTTGTGCAGACCAGTGTACCAAGTGCC
TGCTGATGCGGCGGAATCTGCTTCAACCACCCCGATTCCTGCTCCTCCGA
TGCCGATTGCTGCTCCCAATAAAATCCAGAAACCCATCAAACGACAAGTC
AAGACGGCCCCAGAGAATCTTACCAAAGCCTTGAACTCCATACCAGAATT
CGGAAACCAGCAATTGGAACATGGAAAATTGGGCCGACCATCGCCTTATA
CGGCTCAGGAACAACGTTTGAGCAGTTCATATGATATCATCAAGCAAGAA
CCAACTCCCTCGCACAAGGCCTTCGAGCGCGCTAGCGAAGATAAGGCGCC
GCAGGGCGGCAGCTGTTGCTCTCGCAAGCCCCAGCCCTCACAGACTATAA
CTCCGGAGGTTCAAGCTCCCGCGGTTCAACGTTCCTGTTGTAGCAAGTCC
AAGCCGGCGGCTCAAGACGTCGAGATGGAAGGCAGCATTCTTAACAGTTC
TGATTACTTCCACCCTCCAGTCTTTGACAGCGATAACGCAAGATACACCC
CGAATTCTATTCCTCAAGTTTCGACATGGCAGGATTTCCAAGCAGCGAAG
CAGAGCCAGTACATGCAGCCTTTTGCATTGCCCGTATCCGAGTCCGGTTA
TCTTCCCATGGCCGGACCTGCCGCAGATATTCGTCCTAAGCCACTAGACT
TTCAGCATCCGCCTGCTTTCAACAACTATGATCTCTTCAGCAACCAGACT
TCTCAGCAACCGTCGGAGAATACGCAGAATGTCGTTGCAGATCCAGAAAG
TACTGCTAGCGATGACGCCCATGACTGTAGCTGTGGCGATGGTTGTCAAT
GTCTGGGCTGCGCGTCTCACCCGTTCAACAACACTACACGACAGCATGTC
CAACAAATGGGCCTCCTGGTGGCCCTGAATGATGATGAGCAAAGCCCCGA
AAGGCTGAACAGTCATAGAGGCTCCCCTCTGCAAAGTCAACCACCAGACT
TCTCATCATTACAATATTCCCTCACAAACTTCGGAAATCCTCTGGGTGAA
GGCTTTCACCCTGTTGCAATGCACCCATATGCCCAACAGGGTACGGATCC
AAGTCACGTAAATAATGGCTATTCTTCTCCACCTGCGGATTATCTAGGAC
AGCAGCTCATGGTGCCGTCAGAGTACTATACTCTCGAGTACTCAGTGGGG
CTGCCTAGTGCTTGCGTCGATACAACTGGAAGTTGCCAGTGCGGGAATGA
CTGTACCTGTGTTGGCTGTCTCACCCACAGCGGACACAATGGACTGCCTC
TTGAGCCCGCCATGCCCGAGAGCAACTGGGACCACATGAATCTTCCAGGT
TTCTCCATGGACGCCGCTGGGCACAGCCCGTCGCAGATGCCCGTGATGGA
TAACTTTGTCGCTCATTCGAACTCTATGCTGTAGATGCCTCTCGATGAAG
AAGGGGCCAAATGGTCTTGTGAGCCATGTATCCGTGGCCATCGGTCCTCG
AAATGCCAGCACTTCGACAGGATGATGATGAAGGTCCCAAAGGCCGGACG
ACCGCTTGCTAGATGCCCTCATCCGAAGGGAACTTGCAGCTGCCAGAAAC
TATATGCGTTCATGATCCGCATCCCCAAAGGCTCGACTTGCTTGTGCAGA
CCAGTGTACCAAGTGCCTGCTGATGCGGCGGAATCTGCTTCAACCACCCC
GATTCCTGCTCCTCCGATGCCGATTGCTGCTCCCAATAAAATCCAGAAAC
CCATCAAACGACAAGTCAAGACGGCCCCAGAGAATCTTACCAAAGCCTTG
AACTCCATACCAGAATTCGGAAACCAGCAATTGGAACATGGAAAATTGGG
CCGACCATCGCCTTATACGGCTCAGGAACAACGTTTGAGCAGTTCATATG
ATATCATCAAGCAAGAACCAACTCCCTCGCACAAGGCCTTCGAGCGCGCT
AGCGAAGATAAGGCGCCGCAGGGCGGCAGCTGTTGCTCTCGCAAGCCCCA
GCCCTCACAGACTATAACTCCGGAGGTTCAAGCTCCCGCGGTTCAACGTT
CCTGTTGTAGCAAGTCCAAGCCGGCGGCTCAAGACGTCGAGATGGAAGGC
AGCATTCTTAACAGTTCTGATTACTTCCACCCTCCAGTCTTTGACAGCGA
TAACGCAAGATACACCCCGAATTCTATTCCTCAAGTTTCGACATGGCAGG
ATTTCCAAGCAGCGAAGCAGAGCCAGTACATGCAGCCTTTTGCATTGCCC
GTATCCGAGTCCGGTTATCTTCCCATGGCCGGACCTGCCGCAGATATTCG
TCCTAAGCCACTAGACTTTCAGCATCCGCCTGCTTTCAACAACTATGATC
TCTTCAGCAACCAGACTTCTCAGCAACCGTCGGAGAATACGCAGAATGTC
GTTGCAGATCCAGAAAGTACTGCTAGCGATGACGCCCATGACTGTAGCTG
TGGCGATGGTTGTCAATGTCTGGGCTGCGCGTCTCACCCGTTCAACAACA
CTACACGACAGCATGTCCAACAAATGGGCCTCCTGGTGGCCCTGAATGAT
GATGAGCAAAGCCCCGAAAGGCTGAACAGTCATAGAGGCTCCCCTCTGCA
AAGTCAACCACCAGACTTCTCATCATTACAATATTCCCTCACAAACTTCG
GAAATCCTCTGGGTGAAGGCTTTCACCCTGTTGCAATGCACCCATATGCC
CAACAGGGTACGGATCCAAGTCACGTAAATAATGGCTATTCTTCTCCACC
TGCGGATTATCTAGGACAGCAGCTCATGGTGCCGTCAGAGTACTATACTC
TCGAGTACTCAGTGGGGCTGCCTAGTGCTTGCGTCGATACAACTGGAAGT
TGCCAGTGCGGGAATGACTGTACCTGTGTTGGCTGTCTCACCCACAGCGG
ACACAATGGACTGCCTCTTGAGCCCGCCATGCCCGAGAGCAACTGGGACC
ACATGAATCTTCCAGGTTTCTCCATGGACGCCGCTGGGCACAGCCCGTCG
CAGATGCCCGTGATGGATAACTTTGTCGCTCATTCGAACTCTATGCTGTA
G back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
| GO:0042025 | host cell nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0005507 | copper ion binding |
| GO:0003700 | DNA-binding transcription factor activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012302-T1.utr5p1 | KJC3_012302-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036395 |
| DBxref | InterPro:IPR001083 |
| DBxref | PFAM:PF00649 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:3160253..3162540 + |
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