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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch8:3444843..3447548+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_012395-T1 ID=KJC3_012395-T1|Name=KJC3_012395-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2706bp|location=Sequence derived from alignment at ch8:3444843..3447548+ (Aspergillus niger KJC3)
GTACATTCCGCCCCTTCCACGAGATTGCAGGCTCAATCTTTCTATCTCAT
AGACTCGCTGCCAGTCATGGAGAGCCGTGGCTTGACCCTCCGCAGCAAGT
CGCGCCGCCCCCGCCCCCAGATCAGTGCTCCGAAGCCCATATCCGGCCCT
TTGCCGACCAATAACGGCAGTAAGGGTGCCGGTACTCCAGGGCAGAACAC
TTCCTCTCCCAGCTCGACATCCCTGGACCGGGCCCCTTCGAAGGGCGCGA
CCTCTGATCTAGTCAAGCGCCGCTATTCCACCCGTTTTAATCAGGCCCCC
GACTTCGATGTCAGCGCTCCGCCGGTGCCGGGCCTGCCCAAGGCACCAGC
CACGTATGGCGGGCTCAGCCCACCCGAGACGAGTCGAAGACCGTCCACCG
AGTCTTCTGGTCCCCCCAAGGTGGACTTGAATGCCCTTCGGGATCCTAGC
CTCCCAGTTGACAAGTGTGAGTGACGCCCGACATAGGTCCCCGCGTTTCC
CCCCTCCCGATCCCACGGGTGCTAACGTGGCACCAATCTCCGCCAGACGT
TGCCAACCTACTCGCCAATGCCTCGGAAGAGGAAATCGAAGCATATCAGA
AGAGCCTTCGCAAGGTCAAAAACCGAACTTCGACCGATCTGCAGCAAAAT
GTTTACCAGAACCGCACTCAATTCATCAAGATCAGTAAGGAGGCGGAGAA
GCTCAAAGGGGAAATGCGGACCCTCCGCACTCTGATGGCGGAGCTTACCA
CTGCGCTCGGACAGACCACCATCGGCAACACCCCGAATCCCATGTCCCCC
GCCGTTGACGAGTACATGCCGAAACGTAATGCCAACCGGAGTTCTGTCGC
TAATCTGGAGAGCATGTGGAACGTCCAGCTTCAAACCCTCTGGAAGACGG
TGGAGGGCTCCCAGAAGTTCCTACCGGTGGTACCTGGCCGACACATCGTG
ATGGAGACGGGGCATTGGGTGGAACTGGACTCTGCAACCTGGAAGCCCAG
GCGACCAGTTCACATAGTGTTGCTCAACGACCACCTGCTGATCGCCGCGA
AGAAGCGCAAGCGGGTTGACCAGAGCAGCCATCGCGGGCCGGTCCCCACC
AAGCTGGTCGCGGAAGAATGCTGGCCCTTACAAGACGTCGATATGATCGA
CCTTGGTGCCAATCTCTCCGCGGGGGTTGCTCGAGATGAAGCCGAAGACC
GGGGAATTGCGAATGCAATCAACGTCCGCGTCGGCGGGAAGCCGTTTACC
TATCGTCATGACAAGCGCGACAGCTCGGCTAAAGGGGAACTGCTCGCGAC
CTTCCGGAAGACTGTCGAGGATCTCCGACGTAATCTTCGCTCGGAGACTG
AGGCCGCAAGCAAATCCACCGAGTCATTCGGCTACCTGGGCGTCCGGCGC
CCCTCCCATTCCCCCATGCCGGATCAGTATGACGGCGGCGAAAGCACCCG
CGACAAGCCGGAGGTGCGTATCGATGTGGATGGAAAGCAACAGAATCTTC
GTTGGGTGGACGGGCAGGTGGACGAATTGGATATTGACATCGCCCTGCAG
CGGTTTGAGGAGGCTGTGTCTAACGTCGAGCGGCTTCGCAAGCTCGCCAA
GGGCCTGAAGGGCAACGCGGTCGCGCAGGACGTGATCAATACGAAGGTCG
ACGAGCGTGCAGCCACCCTGGCGGAGGTACTTCTGCGAGCGCTCGTGGAT
ACACACTCATTTCCCGTGTCGACCAAAACGAGGGTCTCCTGGCTCACGCG
GCTAGGCTTTGAAGATCAAGCCCGGGAAGCTTACTTGAAAACCCGCTCGG
AAATCGTCTCCAAACGGATCCGGTATGTCTCCCGATACCGCTCACCCAGT
CGCACGAATACTAACCTACTGCAGTGCCTGTATCTTCGAGGGAGACCTCC
CACTCTACATTTTCCAGATCTCCTACGTCTACTTCACGTTGATCAAGAAC
ACCATTAGCATCTACCAACAGTGTTTTCCGCCGGTCATGTCCAGCGCCAG
TATCCGTTGGGCAAAACACCACCTTGACGGCTTTAACGCCCTGCTCACGC
GCCAGCTCAGCAGCGTCCAACGCGGCACAACTGTCTGGCAGAAATGCATT
GACATCGTGCATGAGCAGGCTGATCAGCTGACCGAGGTAGGCGTGGACTT
TACCGACCTCGTCGCGAAGGACTTGGAGACGGGTGAAGAGTTCACCGAAC
GACCGCAGATGACCCGGTCTGAGTCCCTTATTTCCGGGTTAGCGGATACT
GCAGCGGCAGCTGCAATTATTTAAGTGACGCGTGTATATTGGCTTATCTT
TCTGTCTATTACCACTAGCCTCAGGAGGCTATGTTTGATGATGTGTGTTC
TGCGTCGCCCGTTTGTGCACTTTTATATTTTCAGTCTGTTTGACATAGAC
CCCACGCGCCGTGCTCCAGAATGGACCTATGTTCGTGTCTTCTATTCTGT
ATTCTCTAAATGTTCTACCCATACCCATGAACGCTGAGCTTCGTCGTGTA
TATGGCGCTATACCGACGTTCAATGGATCCATGTATACCCCGCACAAATT
ATTCCTCCCTTGAATTGAAACTTGCAATCGACAAGTCTGAAAAAATTCCT
ACAAGCAGAGATACGCAGATACCTGTCCTTCAAGCTACCTCCATCATGTT
ACTGAAGCGGGGGATAGAGTAGTAGGAAAAGCGTCTAGAGGATCTCCGAA
GTCGGC back to topCoding sequence (CDS) from alignment at ch8:3444843..3447548+ >KJC3_012395-T1 ID=KJC3_012395-T1|Name=KJC3_012395-T1|organism=Aspergillus niger KJC3|type=CDS|length=6228bp|location=Sequence derived from alignment at ch8:3444843..3447548+ (Aspergillus niger KJC3)
ATGGAGAGCCGTGGCTTGACCCTCCGCAGCAAGTCGCGCCGCCCCCGCCC
CCAGATCAGTGCTCCGAAGCCCATATCCGGCCCTTTGCCGACCAATAACG
GCAGTAAGGGTGCCGGTACTCCAGGGCAGAACACTTCCTCTCCCAGCTCG
ACATCCCTGGACCGGGCCCCTTCGAAGGGCGCGACCTCTGATCTAGTCAA
GCGCCGCTATTCCACCCGTTTTAATCAGGCCCCCGACTTCGATGTCAGCG
CTCCGCCGGTGCCGGGCCTGCCCAAGGCACCAGCCACGTATGGCGGGCTC
AGCCCACCCGAGACGAGTCGAAGACCGTCCACCGAGTCTTCTGGTCCCCC
CAAGGTGGACTTGAATGCCCTTCGGGATCCTAGCCTCCCAGTTGACAAGT
ACGTTGCCAACCTACTCGCCAATGCCTCGGAAGAGGAAATCGAAGCATAT
CAGAAGAGCCTTCGCAAGGTCAAAAACCGAACTTCGACCGATCTGCAGCA
AAATGTTTACCAGAACCGCACTCAATTCATCAAGATCAGTAAGGAGGCGG
AGAAGCTCAAAGGGGAAATGCGGACCCTCCGCACTCTGATGGCGGAGCTT
ACCACTGCGCTCGGACAGACCACCATCGGCAACACCCCGAATCCCATGTC
CCCCGCCGTTGACGAGTACATGCCGAAACGTAATGCCAACCGGAGTTCTG
TCGCTAATCTGGAGAGCATGTGGAACGTCCAGCTTCAAACCCTCTGGAAG
ACGGTGGAGGGCTCCCAGAAGTTCCTACCGGTGGTACCTGGCCGACACAT
CGTGATGGAGACGGGGCATTGGGTGGAACTGGACTCTGCAACCTGGAAGC
CCAGGCGACCAGTTCACATAGTGTTGCTCAACGACCACCTGCTGATCGCC
GCGAAGAAGCGCAAGCGGGTTGACCAGAGCAGCCATCGCGGGCCGGTCCC
CACCAAGCTGGTCGCGGAAGAATGCTGGCCCTTACAAGACGTCGATATGA
TCGACCTTGGTGCCAATCTCTCCGCGGGGGTTGCTCGAGATGAAGCCGAA
GACCGGGGAATTGCGAATGCAATCAACGTCCGCGTCGGCGGGAAGCCGTT
TACCTATCGTCATGACAAGCGCGACAGCTCGGCTAAAGGGGAACTGCTCG
CGACCTTCCGGAAGACTGTCGAGGATCTCCGACGTAATCTTCGCTCGGAG
ACTGAGGCCGCAAGCAAATCCACCGAGTCATTCGGCTACCTGGGCGTCCG
GCGCCCCTCCCATTCCCCCATGCCGGATCAGTATGACGGCGGCGAAAGCA
CCCGCGACAAGCCGGAGGTGCGTATCGATGTGGATGGAAAGCAACAGAAT
CTTCGTTGGGTGGACGGGCAGGTGGACGAATTGGATATTGACATCGCCCT
GCAGCGGTTTGAGGAGGCTGTGTCTAACGTCGAGCGGCTTCGCAAGCTCG
CCAAGGGCCTGAAGGGCAACGCGGTCGCGCAGGACGTGATCAATACGAAG
GTCGACGAGCGTGCAGCCACCCTGGCGGAGGTACTTCTGCGAGCGCTCGT
GGATACACACTCATTTCCCGTGTCGACCAAAACGAGGGTCTCCTGGCTCA
CGCGGCTAGGCTTTGAAGATCAAGCCCGGGAAGCTTACTTGAAAACCCGC
TCGGAAATCGTCTCCAAACGGATCCGTGCCTGTATCTTCGAGGGAGACCT
CCCACTCTACATTTTCCAGATCTCCTACGTCTACTTCACGTTGATCAAGA
ACACCATTAGCATCTACCAACAGTGTTTTCCGCCGGTCATGTCCAGCGCC
AGTATCCGTTGGGCAAAACACCACCTTGACGGCTTTAACGCCCTGCTCAC
GCGCCAGCTCAGCAGCGTCCAACGCGGCACAACTGTCTGGCAGAAATGCA
TTGACATCGTGCATGAGCAGGCTGATCAGCTGACCGAGGTAGGCGTGGAC
TTTACCGACCTCGTCGCGAAGGACTTGGAGACGGGTGAAGAGTTCACCGA
ACGACCGCAGATGACCCGGTCTGAGTCCCTTATTTCCGGGTTAGCGGATA
CTGCAGCGGCAGCTGCAATTATTTAAATGGAGAGCCGTGGCTTGACCCTC
CGCAGCAAGTCGCGCCGCCCCCGCCCCCAGATCAGTGCTCCGAAGCCCAT
ATCCGGCCCTTTGCCGACCAATAACGGCAGTAAGGGTGCCGGTACTCCAG
GGCAGAACACTTCCTCTCCCAGCTCGACATCCCTGGACCGGGCCCCTTCG
AAGGGCGCGACCTCTGATCTAGTCAAGCGCCGCTATTCCACCCGTTTTAA
TCAGGCCCCCGACTTCGATGTCAGCGCTCCGCCGGTGCCGGGCCTGCCCA
AGGCACCAGCCACGTATGGCGGGCTCAGCCCACCCGAGACGAGTCGAAGA
CCGTCCACCGAGTCTTCTGGTCCCCCCAAGGTGGACTTGAATGCCCTTCG
GGATCCTAGCCTCCCAGTTGACAAGTACGTTGCCAACCTACTCGCCAATG
CCTCGGAAGAGGAAATCGAAGCATATCAGAAGAGCCTTCGCAAGGTCAAA
AACCGAACTTCGACCGATCTGCAGCAAAATGTTTACCAGAACCGCACTCA
ATTCATCAAGATCAGTAAGGAGGCGGAGAAGCTCAAAGGGGAAATGCGGA
CCCTCCGCACTCTGATGGCGGAGCTTACCACTGCGCTCGGACAGACCACC
ATCGGCAACACCCCGAATCCCATGTCCCCCGCCGTTGACGAGTACATGCC
GAAACGTAATGCCAACCGGAGTTCTGTCGCTAATCTGGAGAGCATGTGGA
ACGTCCAGCTTCAAACCCTCTGGAAGACGGTGGAGGGCTCCCAGAAGTTC
CTACCGGTGGTACCTGGCCGACACATCGTGATGGAGACGGGGCATTGGGT
GGAACTGGACTCTGCAACCTGGAAGCCCAGGCGACCAGTTCACATAGTGT
TGCTCAACGACCACCTGCTGATCGCCGCGAAGAAGCGCAAGCGGGTTGAC
CAGAGCAGCCATCGCGGGCCGGTCCCCACCAAGCTGGTCGCGGAAGAATG
CTGGCCCTTACAAGACGTCGATATGATCGACCTTGGTGCCAATCTCTCCG
CGGGGGTTGCTCGAGATGAAGCCGAAGACCGGGGAATTGCGAATGCAATC
AACGTCCGCGTCGGCGGGAAGCCGTTTACCTATCGTCATGACAAGCGCGA
CAGCTCGGCTAAAGGGGAACTGCTCGCGACCTTCCGGAAGACTGTCGAGG
ATCTCCGACGTAATCTTCGCTCGGAGACTGAGGCCGCAAGCAAATCCACC
GAGTCATTCGGCTACCTGGGCGTCCGGCGCCCCTCCCATTCCCCCATGCC
GGATCAGTATGACGGCGGCGAAAGCACCCGCGACAAGCCGGAGGTGCGTA
TCGATGTGGATGGAAAGCAACAGAATCTTCGTTGGGTGGACGGGCAGGTG
GACGAATTGGATATTGACATCGCCCTGCAGCGGTTTGAGGAGGCTGTGTC
TAACGTCGAGCGGCTTCGCAAGCTCGCCAAGGGCCTGAAGGGCAACGCGG
TCGCGCAGGACGTGATCAATACGAAGGTCGACGAGCGTGCAGCCACCCTG
GCGGAGGTACTTCTGCGAGCGCTCGTGGATACACACTCATTTCCCGTGTC
GACCAAAACGAGGGTCTCCTGGCTCACGCGGCTAGGCTTTGAAGATCAAG
CCCGGGAAGCTTACTTGAAAACCCGCTCGGAAATCGTCTCCAAACGGATC
CGTGCCTGTATCTTCGAGGGAGACCTCCCACTCTACATTTTCCAGATCTC
CTACGTCTACTTCACGTTGATCAAGAACACCATTAGCATCTACCAACAGT
GTTTTCCGCCGGTCATGTCCAGCGCCAGTATCCGTTGGGCAAAACACCAC
CTTGACGGCTTTAACGCCCTGCTCACGCGCCAGCTCAGCAGCGTCCAACG
CGGCACAACTGTCTGGCAGAAATGCATTGACATCGTGCATGAGCAGGCTG
ATCAGCTGACCGAGGTAGGCGTGGACTTTACCGACCTCGTCGCGAAGGAC
TTGGAGACGGGTGAAGAGTTCACCGAACGACCGCAGATGACCCGGTCTGA
GTCCCTTATTTCCGGGTTAGCGGATACTGCAGCGGCAGCTGCAATTATTT
AAATGGAGAGCCGTGGCTTGACCCTCCGCAGCAAGTCGCGCCGCCCCCGC
CCCCAGATCAGTGCTCCGAAGCCCATATCCGGCCCTTTGCCGACCAATAA
CGGCAGTAAGGGTGCCGGTACTCCAGGGCAGAACACTTCCTCTCCCAGCT
CGACATCCCTGGACCGGGCCCCTTCGAAGGGCGCGACCTCTGATCTAGTC
AAGCGCCGCTATTCCACCCGTTTTAATCAGGCCCCCGACTTCGATGTCAG
CGCTCCGCCGGTGCCGGGCCTGCCCAAGGCACCAGCCACGTATGGCGGGC
TCAGCCCACCCGAGACGAGTCGAAGACCGTCCACCGAGTCTTCTGGTCCC
CCCAAGGTGGACTTGAATGCCCTTCGGGATCCTAGCCTCCCAGTTGACAA
GTACGTTGCCAACCTACTCGCCAATGCCTCGGAAGAGGAAATCGAAGCAT
ATCAGAAGAGCCTTCGCAAGGTCAAAAACCGAACTTCGACCGATCTGCAG
CAAAATGTTTACCAGAACCGCACTCAATTCATCAAGATCAGTAAGGAGGC
GGAGAAGCTCAAAGGGGAAATGCGGACCCTCCGCACTCTGATGGCGGAGC
TTACCACTGCGCTCGGACAGACCACCATCGGCAACACCCCGAATCCCATG
TCCCCCGCCGTTGACGAGTACATGCCGAAACGTAATGCCAACCGGAGTTC
TGTCGCTAATCTGGAGAGCATGTGGAACGTCCAGCTTCAAACCCTCTGGA
AGACGGTGGAGGGCTCCCAGAAGTTCCTACCGGTGGTACCTGGCCGACAC
ATCGTGATGGAGACGGGGCATTGGGTGGAACTGGACTCTGCAACCTGGAA
GCCCAGGCGACCAGTTCACATAGTGTTGCTCAACGACCACCTGCTGATCG
CCGCGAAGAAGCGCAAGCGGGTTGACCAGAGCAGCCATCGCGGGCCGGTC
CCCACCAAGCTGGTCGCGGAAGAATGCTGGCCCTTACAAGACGTCGATAT
GATCGACCTTGGTGCCAATCTCTCCGCGGGGGTTGCTCGAGATGAAGCCG
AAGACCGGGGAATTGCGAATGCAATCAACGTCCGCGTCGGCGGGAAGCCG
TTTACCTATCGTCATGACAAGCGCGACAGCTCGGCTAAAGGGGAACTGCT
CGCGACCTTCCGGAAGACTGTCGAGGATCTCCGACGTAATCTTCGCTCGG
AGACTGAGGCCGCAAGCAAATCCACCGAGTCATTCGGCTACCTGGGCGTC
CGGCGCCCCTCCCATTCCCCCATGCCGGATCAGTATGACGGCGGCGAAAG
CACCCGCGACAAGCCGGAGGTGCGTATCGATGTGGATGGAAAGCAACAGA
ATCTTCGTTGGGTGGACGGGCAGGTGGACGAATTGGATATTGACATCGCC
CTGCAGCGGTTTGAGGAGGCTGTGTCTAACGTCGAGCGGCTTCGCAAGCT
CGCCAAGGGCCTGAAGGGCAACGCGGTCGCGCAGGACGTGATCAATACGA
AGGTCGACGAGCGTGCAGCCACCCTGGCGGAGGTACTTCTGCGAGCGCTC
GTGGATACACACTCATTTCCCGTGTCGACCAAAACGAGGGTCTCCTGGCT
CACGCGGCTAGGCTTTGAAGATCAAGCCCGGGAAGCTTACTTGAAAACCC
GCTCGGAAATCGTCTCCAAACGGATCCGTGCCTGTATCTTCGAGGGAGAC
CTCCCACTCTACATTTTCCAGATCTCCTACGTCTACTTCACGTTGATCAA
GAACACCATTAGCATCTACCAACAGTGTTTTCCGCCGGTCATGTCCAGCG
CCAGTATCCGTTGGGCAAAACACCACCTTGACGGCTTTAACGCCCTGCTC
ACGCGCCAGCTCAGCAGCGTCCAACGCGGCACAACTGTCTGGCAGAAATG
CATTGACATCGTGCATGAGCAGGCTGATCAGCTGACCGAGGTAGGCGTGG
ACTTTACCGACCTCGTCGCGAAGGACTTGGAGACGGGTGAAGAGTTCACC
GAACGACCGCAGATGACCCGGTCTGAGTCCCTTATTTCCGGGTTAGCGGA
TACTGCAGCGGCAGCTGCAATTATTTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012395-T1.utr5p1 | KJC3_012395-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_012395-T1.utr3p1 | KJC3_012395-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR016159 |
| DBxref | InterPro:IPR042560 |
| DBxref | InterPro:IPR032403 |
| DBxref | InterPro:IPR011993 |
| DBxref | InterPro:IPR042561 |
| DBxref | PFAM:PF08700 |
| DBxref | PFAM:PF16528 |
| Product | exocyst complex component exo84 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch8 | supercontig | ch8:3444843..3447548 + |
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