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KJC3_012811-T1, KJC3_012811-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_012811-T1
Unique NameKJC3_012811-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch8:4630956..4632079+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_012811-T1 ID=KJC3_012811-T1|Name=KJC3_012811-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1124bp|location=Sequence derived from alignment at ch8:4630956..4632079+ (Aspergillus niger KJC3)
GCATTACTTACCGCCTTGGAAGTGTCCAAGAGGTCTTCTTTCTGGCGAAC
CTTCATCAAACAAGAACGCATCAATTATCAAGGATGAAGCCTGGACCCTG
TTGCTTATAAAGATATGACCCATGGTAGAGATATGCCAAAAGCGGGCAGC
CGATGGGGTTACATGATGGCATAGTCTACGTCACCACCCGAGCATCCAGA
CCCTGCCGGTTTATAAATTGATTACCATGTGCAACCCTGGATGACATATG
CCGAATTCGATGGCAACTGCTGTTAAAATGAACGGCGTGTCAAGGTGCTT
GGGGAAACAATTCACACAATACGCAAAAGCACCCCTCTTCAGGAAGTGCA
ATACGATCCCATTCCGTCTTTCCGGCATTTCTATTCGAAGTTACTCAGAC
CGAAGCCCCAAATACAACGGCAACATGACTAGTCAACCTCCCAAGAATGA
GATGGTGTATATGCCAGGGGTGATGTCACCCAACCGATCGTTCGGTGTCT
TCCGCAAGGTCCTCCACACAGGTCTATACTCTCAATTTGTGGCCATGGAA
GTGCCAGTCAACGGCGAAATTGGCGACGAGGTCAGTCCCATCTCTCAACG
ATCGAAGTGAACGGACGGCTAATTGAGAATCGCCAGATCCACACCGTTGA
CCAAGTCCTGATCTTCACCCATGGCACTGGCAAGGCAATTGTTGCCGGGA
AGGAACAAGAGGTCACACAAAACGATGTCGTCATAGTCCCGGCTGGCACT
CAACACCAGTTCTTGAATATCGGAAACACGCCGCTCGAAGTGGTTACCAT
ATATTCCCCGGCTGAACATGACCCGCGCACGGTACATCAGACCAAGGCAG
AGGGTGATGCACAGGAAGAGGCAGGCGAGGATGAAGCGCCAGAGTGGAGT
CAACGGAGCAAGTCGGAGAACGAGAAGATTGGGCTGGTCAAGACGTCATA
AGCAGCGAACGGTATATATTCAAACGACCAAGTCTACTATGTAGCTACCC
GGAGCCTATGTTCAATTCATGAACAATTGGCTCAGCCTATTGTAAGACAC
GGCGACACGTCAACAGGAGCGTAGTCAGACCGAGCCTAAACAGTTCTAAT
TGAAATCGAGCGTACTCATACTCA
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Coding sequence (CDS) from alignment at ch8:4630956..4632079+

>KJC3_012811-T1 ID=KJC3_012811-T1|Name=KJC3_012811-T1|organism=Aspergillus niger KJC3|type=CDS|length=1296bp|location=Sequence derived from alignment at ch8:4630956..4632079+ (Aspergillus niger KJC3)
ATGCCGAATTCGATGGCAACTGCTGTTAAAATGAACGGCGTGTCAAGGTG
CTTGGGGAAACAATTCACACAATACGCAAAAGCACCCCTCTTCAGGAAGT
GCAATACGATCCCATTCCGTCTTTCCGGCATTTCTATTCGAAGTTACTCA
GACCGAAGCCCCAAATACAACGGCAACATGACTAGTCAACCTCCCAAGAA
TGAGATGGTGTATATGCCAGGGGTGATGTCACCCAACCGATCGTTCGGTG
TCTTCCGCAAGGTCCTCCACACAGGTCTATACTCTCAATTTGTGGCCATG
GAAGTGCCAGTCAACGGCGAAATTGGCGACGAGATCCACACCGTTGACCA
AGTCCTGATCTTCACCCATGGCACTGGCAAGGCAATTGTTGCCGGGAAGG
AACAAGAGGTCACACAAAACGATGTCGTCATAGTCCCGGCTGGCACTCAA
CACCAGTTCTTGAATATCGGAAACACGCCGCTCGAAGTGGTTACCATATA
TTCCCCGGCTGAACATGACCCGCGCACGGTACATCAGACCAAGGCAGAGG
GTGATGCACAGGAAGAGGCAGGCGAGGATGAAGCGCCAGAGTGGAGTCAA
CGGAGCAAGTCGGAGAACGAGAAGATTGGGCTGGTCAAGACGTCATAAAT
GCCGAATTCGATGGCAACTGCTGTTAAAATGAACGGCGTGTCAAGGTGCT
TGGGGAAACAATTCACACAATACGCAAAAGCACCCCTCTTCAGGAAGTGC
AATACGATCCCATTCCGTCTTTCCGGCATTTCTATTCGAAGTTACTCAGA
CCGAAGCCCCAAATACAACGGCAACATGACTAGTCAACCTCCCAAGAATG
AGATGGTGTATATGCCAGGGGTGATGTCACCCAACCGATCGTTCGGTGTC
TTCCGCAAGGTCCTCCACACAGGTCTATACTCTCAATTTGTGGCCATGGA
AGTGCCAGTCAACGGCGAAATTGGCGACGAGATCCACACCGTTGACCAAG
TCCTGATCTTCACCCATGGCACTGGCAAGGCAATTGTTGCCGGGAAGGAA
CAAGAGGTCACACAAAACGATGTCGTCATAGTCCCGGCTGGCACTCAACA
CCAGTTCTTGAATATCGGAAACACGCCGCTCGAAGTGGTTACCATATATT
CCCCGGCTGAACATGACCCGCGCACGGTACATCAGACCAAGGCAGAGGGT
GATGCACAGGAAGAGGCAGGCGAGGATGAAGCGCCAGAGTGGAGTCAACG
GAGCAAGTCGGAGAACGAGAAGATTGGGCTGGTCAAGACGTCATAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_012811KJC3_012811Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012811-T1.utr5p1KJC3_012811-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012811-T1.exon1KJC3_012811-T1.exon1Aspergillus niger KJC3exon
KJC3_012811-T1.exon2KJC3_012811-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012811-T1.cdsKJC3_012811-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012811-T1.utr3p1KJC3_012811-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_012811-T1KJC3_012811-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR011051
DBxrefInterPro:IPR014710
DBxrefInterPro:IPR013096
DBxrefPFAM:PF07883
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch8supercontigch8:4630956..4632079 +
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