You are here

Home

M747DRAFT_366946-T1, M747DRAFT_366946-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_366946-T1
Unique NameM747DRAFT_366946-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851901.1:687818..689823-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_366946-T1 ID=M747DRAFT_366946-T1|Name=M747DRAFT_366946-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2006bp|location=Sequence derived from alignment at KZ851901.1:687818..689823- (Aspergillus niger ATCC 13496)
ACGCCTGCTTCACCTGTTGCTCCTCCTCGTCCTTCCCCCTCTTTTCTCCC
TCTTTCACTTCTTTTCTTTCCCTTTGGTCTCTCCTTTGCGCTACTTTCCT
TCGATTTTCCCAAGCTTACCGATCAGTCCCTACCTCCAGCTGCCTGATCG
ATCCTCCGTTCCCTTCCTCGGCTTAGAACCGTTATCGCCGACCGTCCCGG
CTGCCTCCACCGGAGATCATCCTCCCACCATGAAGCCACCCACATCCTCG
TTGCTGAGGTTCCTCTTCCTTCTGGCTGCTCCGCTTGTCTCTCATGCTGC
CTCCGATTCTTCTGCTCCCAAGGATGGCCTTTCTCCCTGTGTCGTCCGCT
CTCCGACGACCGGCCTATTCTACGATCTGAATACCATCTCCTTATCTCCA
CCCCCGGTAGACGGGGACAAACCTCGCAAAGGCGCCCGAGACGAGAGTTG
GCACGCCAGAGGACACGATTATAATGCCAACTTTACGCTAAACATCTGTG
CGCCCGTGGTCGAAGATATCAAGGATGTGGTGGGGGTGGACCGCTCAAGG
TGGAGGAATGTTAGCGCCTACTATGAGAGGGAGGGTAAAGTCTACTCCAT
TGGGTACGGTGACCCTACTTTTCTATACCACTTGCCATAATCACTCGACT
GACCCGATGCAGTCAACAAGCATCAGACCCCTTCTTCCGCGGCCGAAAGC
TGGTCATGAACTATACCAATGGCTCCCCTTGTGCCGGCGATTACATCGGA
AATGCCGCCCGCACCAAATCCACCATCATGTCGTTCCTGTGTGAGCGCGA
CACCCCTGCCTCCCAGGCGACGGTCTCCTTTGTCGGCACCATGGACCAGT
GCACATATTTCTTCGAGGTGCGAAGCTCTGCCGCTTGTGGCGCTACCGCG
CCCACACCGGATAACCCGGGCCTTTCGCCAGGCGGCGTATTCGGCGTAAT
GTAAGTAGGAAATACCCTACGGTATGGTCAGCGACTAATAAGCACAGTGC
CTTGATCGCCGTGGCGGCGTACCTAGTCGGTGGTTGCGCATACCAACGAA
CCGTCATGCACCAGCGCGGTTGGAGACAGTGCCCGAACTACAGTCTTTGG
GCGGGAATGCTCGACTTCATCAAAGTAAGTATACTGGCGTTAATTCCGTT
CCGACGGTCCCGGCGGCATGAGCAGGCCTCGTACAAGGAGTTTGGCAATG
CAAGGTTGCCTGTTTCGAGGATGGATTGAATCTGCTTTGGCTGGTCTGGA
GCTCAATTACATCAGGCGTGCTTGCATTCCTTCTTTCCTTACGCTTGTCT
TTCTTTGCTCGTCCTCGAAGTCACTCGTTTGGATATCTAGCCCGTGTTGA
ACACGGTATATACAGTCATTGCTTGTGCAGGCCTGGCAAAGACGTCCATA
TAGAGCAAGCTGGAAACATGTCAATAGCTCGAGTGATTGATTCTAGAAAT
CTTTCCTTGCTTCACTCATCTATCCGAACACATACAACCGTCTCATTTGC
TATTCTTCAAGAATACCATTTATTATACAGAACCCTTAGCTAACACCATC
TCCTCTCTCTCTTCCTCCCCAAACAGGACATGATCATCATCCTCCTCTCC
TCCCTAGCCCGCCTCCTCCGCCTAAAACGTTCCCCGGCTCTCGGCCACGG
CCACACCCGCGGCAACAGCGTCAACCACCGCGGCAGTTTCGGCCGTCGAG
GCAGTGACGTCGATGCCGAGAATCGACTGATAGACCAGTTAGATGAGGAG
TGGGAAGATTAAAATTGTTTGTTAGTTGGCAGGCTTTGTTTATTTCTGGG
ACCGATAGCGCAACTTTTATCAGATATGTTATATGTATTGCTGCCAGCAT
TGGTTGTATTTGTTGTACAATGGCCGATTATTATATGCATGGTGCATGCA
TGCATTGGTTGATTCATCGATTGATTGAGCTGGCTCTGTTTTATAGCGTC
GTTGATTATTTCTACTACTATGAGGTGCATGAGAACATGTTTTGCATTTT
ACCAAC
back to top

Coding sequence (CDS) from alignment at KZ851901.1:687818..689823-

>M747DRAFT_366946-T1 ID=M747DRAFT_366946-T1|Name=M747DRAFT_366946-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3900bp|location=Sequence derived from alignment at KZ851901.1:687818..689823- (Aspergillus niger ATCC 13496)
GACATGATCATCATCCTCCTCTCCTCCCTAGCCCGCCTCCTCCGCCTAAA
ACGTTCCCCGGCTCTCGGCCACGGCCACACCCGCGGCAACAGCGTCAACC
ACCGCGGCAGTTTCGGCCGTCGAGGCAGTGACGTCGATGCCGAGAATCGA
CTGATAGACCAGTTAGATGAGGAGTGGGAAGATTAATGCCTTGATCGCCG
TGGCGGCGTACCTAGTCGGTGGTTGCGCATACCAACGAACCGTCATGCAC
CAGCGCGGTTGGAGACAGTGCCCGAACTACAGTCTTTGGGCGGGAATGCT
CGACTTCATCAAATCAACAAGCATCAGACCCCTTCTTCCGCGGCCGAAAG
CTGGTCATGAACTATACCAATGGCTCCCCTTGTGCCGGCGATTACATCGG
AAATGCCGCCCGCACCAAATCCACCATCATGTCGTTCCTGTGTGAGCGCG
ACACCCCTGCCTCCCAGGCGACGGTCTCCTTTGTCGGCACCATGGACCAG
TGCACATATTTCTTCGAGGTGCGAAGCTCTGCCGCTTGTGGCGCTACCGC
GCCCACACCGGATAACCCGGGCCTTTCGCCAGGCGGCGTATTCGGCGTAA
TATGAAGCCACCCACATCCTCGTTGCTGAGGTTCCTCTTCCTTCTGGCTG
CTCCGCTTGTCTCTCATGCTGCCTCCGATTCTTCTGCTCCCAAGGATGGC
CTTTCTCCCTGTGTCGTCCGCTCTCCGACGACCGGCCTATTCTACGATCT
GAATACCATCTCCTTATCTCCACCCCCGGTAGACGGGGACAAACCTCGCA
AAGGCGCCCGAGACGAGAGTTGGCACGCCAGAGGACACGATTATAATGCC
AACTTTACGCTAAACATCTGTGCGCCCGTGGTCGAAGATATCAAGGATGT
GGTGGGGGTGGACCGCTCAAGGTGGAGGAATGTTAGCGCCTACTATGAGA
GGGAGGGTAAAGTCTACTCCATTGGGACATGATCATCATCCTCCTCTCCT
CCCTAGCCCGCCTCCTCCGCCTAAAACGTTCCCCGGCTCTCGGCCACGGC
CACACCCGCGGCAACAGCGTCAACCACCGCGGCAGTTTCGGCCGTCGAGG
CAGTGACGTCGATGCCGAGAATCGACTGATAGACCAGTTAGATGAGGAGT
GGGAAGATTAATGCCTTGATCGCCGTGGCGGCGTACCTAGTCGGTGGTTG
CGCATACCAACGAACCGTCATGCACCAGCGCGGTTGGAGACAGTGCCCGA
ACTACAGTCTTTGGGCGGGAATGCTCGACTTCATCAAATCAACAAGCATC
AGACCCCTTCTTCCGCGGCCGAAAGCTGGTCATGAACTATACCAATGGCT
CCCCTTGTGCCGGCGATTACATCGGAAATGCCGCCCGCACCAAATCCACC
ATCATGTCGTTCCTGTGTGAGCGCGACACCCCTGCCTCCCAGGCGACGGT
CTCCTTTGTCGGCACCATGGACCAGTGCACATATTTCTTCGAGGTGCGAA
GCTCTGCCGCTTGTGGCGCTACCGCGCCCACACCGGATAACCCGGGCCTT
TCGCCAGGCGGCGTATTCGGCGTAATATGAAGCCACCCACATCCTCGTTG
CTGAGGTTCCTCTTCCTTCTGGCTGCTCCGCTTGTCTCTCATGCTGCCTC
CGATTCTTCTGCTCCCAAGGATGGCCTTTCTCCCTGTGTCGTCCGCTCTC
CGACGACCGGCCTATTCTACGATCTGAATACCATCTCCTTATCTCCACCC
CCGGTAGACGGGGACAAACCTCGCAAAGGCGCCCGAGACGAGAGTTGGCA
CGCCAGAGGACACGATTATAATGCCAACTTTACGCTAAACATCTGTGCGC
CCGTGGTCGAAGATATCAAGGATGTGGTGGGGGTGGACCGCTCAAGGTGG
AGGAATGTTAGCGCCTACTATGAGAGGGAGGGTAAAGTCTACTCCATTGG
GACATGATCATCATCCTCCTCTCCTCCCTAGCCCGCCTCCTCCGCCTAAA
ACGTTCCCCGGCTCTCGGCCACGGCCACACCCGCGGCAACAGCGTCAACC
ACCGCGGCAGTTTCGGCCGTCGAGGCAGTGACGTCGATGCCGAGAATCGA
CTGATAGACCAGTTAGATGAGGAGTGGGAAGATTAATGCCTTGATCGCCG
TGGCGGCGTACCTAGTCGGTGGTTGCGCATACCAACGAACCGTCATGCAC
CAGCGCGGTTGGAGACAGTGCCCGAACTACAGTCTTTGGGCGGGAATGCT
CGACTTCATCAAATCAACAAGCATCAGACCCCTTCTTCCGCGGCCGAAAG
CTGGTCATGAACTATACCAATGGCTCCCCTTGTGCCGGCGATTACATCGG
AAATGCCGCCCGCACCAAATCCACCATCATGTCGTTCCTGTGTGAGCGCG
ACACCCCTGCCTCCCAGGCGACGGTCTCCTTTGTCGGCACCATGGACCAG
TGCACATATTTCTTCGAGGTGCGAAGCTCTGCCGCTTGTGGCGCTACCGC
GCCCACACCGGATAACCCGGGCCTTTCGCCAGGCGGCGTATTCGGCGTAA
TATGAAGCCACCCACATCCTCGTTGCTGAGGTTCCTCTTCCTTCTGGCTG
CTCCGCTTGTCTCTCATGCTGCCTCCGATTCTTCTGCTCCCAAGGATGGC
CTTTCTCCCTGTGTCGTCCGCTCTCCGACGACCGGCCTATTCTACGATCT
GAATACCATCTCCTTATCTCCACCCCCGGTAGACGGGGACAAACCTCGCA
AAGGCGCCCGAGACGAGAGTTGGCACGCCAGAGGACACGATTATAATGCC
AACTTTACGCTAAACATCTGTGCGCCCGTGGTCGAAGATATCAAGGATGT
GGTGGGGGTGGACCGCTCAAGGTGGAGGAATGTTAGCGCCTACTATGAGA
GGGAGGGTAAAGTCTACTCCATTGGGACATGATCATCATCCTCCTCTCCT
CCCTAGCCCGCCTCCTCCGCCTAAAACGTTCCCCGGCTCTCGGCCACGGC
CACACCCGCGGCAACAGCGTCAACCACCGCGGCAGTTTCGGCCGTCGAGG
CAGTGACGTCGATGCCGAGAATCGACTGATAGACCAGTTAGATGAGGAGT
GGGAAGATTAATGCCTTGATCGCCGTGGCGGCGTACCTAGTCGGTGGTTG
CGCATACCAACGAACCGTCATGCACCAGCGCGGTTGGAGACAGTGCCCGA
ACTACAGTCTTTGGGCGGGAATGCTCGACTTCATCAAATCAACAAGCATC
AGACCCCTTCTTCCGCGGCCGAAAGCTGGTCATGAACTATACCAATGGCT
CCCCTTGTGCCGGCGATTACATCGGAAATGCCGCCCGCACCAAATCCACC
ATCATGTCGTTCCTGTGTGAGCGCGACACCCCTGCCTCCCAGGCGACGGT
CTCCTTTGTCGGCACCATGGACCAGTGCACATATTTCTTCGAGGTGCGAA
GCTCTGCCGCTTGTGGCGCTACCGCGCCCACACCGGATAACCCGGGCCTT
TCGCCAGGCGGCGTATTCGGCGTAATATGAAGCCACCCACATCCTCGTTG
CTGAGGTTCCTCTTCCTTCTGGCTGCTCCGCTTGTCTCTCATGCTGCCTC
CGATTCTTCTGCTCCCAAGGATGGCCTTTCTCCCTGTGTCGTCCGCTCTC
CGACGACCGGCCTATTCTACGATCTGAATACCATCTCCTTATCTCCACCC
CCGGTAGACGGGGACAAACCTCGCAAAGGCGCCCGAGACGAGAGTTGGCA
CGCCAGAGGACACGATTATAATGCCAACTTTACGCTAAACATCTGTGCGC
CCGTGGTCGAAGATATCAAGGATGTGGTGGGGGTGGACCGCTCAAGGTGG
AGGAATGTTAGCGCCTACTATGAGAGGGAGGGTAAAGTCTACTCCATTGG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_366946M747DRAFT_366946Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_366946-T1M747DRAFT_366946-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_366946-T1.cdsM747DRAFT_366946-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_366946-T1.utr3p1M747DRAFT_366946-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_366946-T1.exon4M747DRAFT_366946-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_366946-T1.exon3M747DRAFT_366946-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_366946-T1.exon2M747DRAFT_366946-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_366946-T1.exon1M747DRAFT_366946-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_366946-T1.utr5p1M747DRAFT_366946-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteSECRETED:SignalP(1-23)
DBxrefInterPro:IPR028927
DBxrefInterPro:IPR009011
DBxrefPFAM:PF02157
DBxrefPFAM:PF09451
Productmannose 6-phosphate receptor domain-containing protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851901.1supercontigKZ851901.1:687818..689823 -
Powered by Drupal