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M747DRAFT_149517-T1, M747DRAFT_149517-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_149517-T1
Unique NameM747DRAFT_149517-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851904.1:53209..54649-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_149517-T1 ID=M747DRAFT_149517-T1|Name=M747DRAFT_149517-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1441bp|location=Sequence derived from alignment at KZ851904.1:53209..54649- (Aspergillus niger ATCC 13496)
CCCACCTTTCCCCCCTCCCCCTTTCCGGTTGTTAACCATCGTACTTTACC
TCGATTCTTCTGTCTCAATCACACGGCAGTAGAGAGCTCCTCCTGTCGTC
TACTCACCATGGCCGCTCCCGAAGCTCATCACCTCTTCCACAACCCAATC
GCCGATCATTCTTTCTCTCCGGATAAGGCGACCCTTGCAGTTGCGCGGGA
AAACAATGTGGAGCTTTATCAGAAGTCAGGCAACAAGTTCTCGTTGACCG
ATGAACTCAAGGGCCATGAGAAGACGGTGACTGGTGTGGATATCGCTCCT
AACAGTGGGCGTATCGTTACTTGTTCTCAGGGTAAGTTAACCCCCTCTCC
CTTGTCCTGCAATAGTTCCGTCTAAGTGACCACGGGAACAGACCGCAACG
CCTACGTCTGGGAGCGGACCCCCACGGGTTGGAAGCCAACGCTGGTTCTC
CTTCGGATAAACAGGGCTGCTACATTTGTACGGTGGTCACCATCTGAGCA
GAAGTTCGCTGTTGGATCTGGTGCTCGCGTGATCGCGGTGTGCTATTTTG
AAGAGGAGAATGACTGGTGGATCTCGAAGCACTTGAAGAAGCCCATCCGC
AGCACTATTACAACCCTTGCTTGGCATCCAAACTCCGTTCTTCTGGCTGC
GGGGTCGACTGACTCCCATGCCCGGGTGCTTTCTAGCTTCATCAAGGGTG
TCGACACGCGCCCGGAGCCCAGTGCCTGGGGTGAACGGCTGCCTTTCAAC
ACAATTTGTGGCGAATTCTTAAATGACTCGGCGGGCTGGATTCAAGGTGT
CTCCTTCTCTCCCAGTGGAGATGCGCTTGCCTTTACTGGCCATGATAGCA
GTGTCACCGTCGTATATCCGAGCGCGCCGGAACAGCCGCCTCGGGCGATG
TTGACCATCGCCACTCGTCTTCTGCCTTTCAACAGTCTGATCTGGAACGG
CGAGAACGAGATCATCGCCGCAGGCCACGTATGTCTTCTAAACAATCAAT
TTCAGCAGATGATCCAGTACGACACGTGTCGCTAACAGGAATTAACAGGA
TTGCGAACCGTACCGCCTTCGCGGTGACGAGAACGGATGGCAACTTGCTG
GGACCATTGAGAGCAAGGCAGGGCCGGGTGCTGGAAGCGCTCGCGAGGAG
TCTGCTCTTAACATGTTCCGCCAAATGGATCTTAAGGGACAAACCCAGGC
CGATACCCAACTTAAGACTACGCATCAGAATACCATCAGCACCGTTAGAG
TCTACGAGGAGGCCGATGGCGTCGTTCGCAAGTTCAGCAGTAAGAGATGC
TCCCCTGCTAAGTTGTCCTGTGGGTTGCGCTAACATTTAGATAATAGCGA
GCGGAGTCGATGGCCGTGTTGTTATCTGGACCATCTAGACAATTACATAT
TGTGCTAGATACGTTCTTAGCACAGAGGTTCTAGCAAATTG
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Coding sequence (CDS) from alignment at KZ851904.1:53209..54649-

>M747DRAFT_149517-T1 ID=M747DRAFT_149517-T1|Name=M747DRAFT_149517-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=4368bp|location=Sequence derived from alignment at KZ851904.1:53209..54649- (Aspergillus niger ATCC 13496)
CGAGCGGAGTCGATGGCCGTGTTGTTATCTGGACCATCTAGGATTGCGAA
CCGTACCGCCTTCGCGGTGACGAGAACGGATGGCAACTTGCTGGGACCAT
TGAGAGCAAGGCAGGGCCGGGTGCTGGAAGCGCTCGCGAGGAGTCTGCTC
TTAACATGTTCCGCCAAATGGATCTTAAGGGACAAACCCAGGCCGATACC
CAACTTAAGACTACGCATCAGAATACCATCAGCACCGTTAGAGTCTACGA
GGAGGCCGATGGCGTCGTTCGCAAGTTCAGCAACCGCAACGCCTACGTCT
GGGAGCGGACCCCCACGGGTTGGAAGCCAACGCTGGTTCTCCTTCGGATA
AACAGGGCTGCTACATTTGTACGGTGGTCACCATCTGAGCAGAAGTTCGC
TGTTGGATCTGGTGCTCGCGTGATCGCGGTGTGCTATTTTGAAGAGGAGA
ATGACTGGTGGATCTCGAAGCACTTGAAGAAGCCCATCCGCAGCACTATT
ACAACCCTTGCTTGGCATCCAAACTCCGTTCTTCTGGCTGCGGGGTCGAC
TGACTCCCATGCCCGGGTGCTTTCTAGCTTCATCAAGGGTGTCGACACGC
GCCCGGAGCCCAGTGCCTGGGGTGAACGGCTGCCTTTCAACACAATTTGT
GGCGAATTCTTAAATGACTCGGCGGGCTGGATTCAAGGTGTCTCCTTCTC
TCCCAGTGGAGATGCGCTTGCCTTTACTGGCCATGATAGCAGTGTCACCG
TCGTATATCCGAGCGCGCCGGAACAGCCGCCTCGGGCGATGTTGACCATC
GCCACTCGTCTTCTGCCTTTCAACAGTCTGATCTGGAACGGCGAGAACGA
GATCATCGCCGCAGGCCACATGGCCGCTCCCGAAGCTCATCACCTCTTCC
ACAACCCAATCGCCGATCATTCTTTCTCTCCGGATAAGGCGACCCTTGCA
GTTGCGCGGGAAAACAATGTGGAGCTTTATCAGAAGTCAGGCAACAAGTT
CTCGTTGACCGATGAACTCAAGGGCCATGAGAAGACGGTGACTGGTGTGG
ATATCGCTCCTAACAGTGGGCGTATCGTTACTTGTTCTCAGGCGAGCGGA
GTCGATGGCCGTGTTGTTATCTGGACCATCTAGGATTGCGAACCGTACCG
CCTTCGCGGTGACGAGAACGGATGGCAACTTGCTGGGACCATTGAGAGCA
AGGCAGGGCCGGGTGCTGGAAGCGCTCGCGAGGAGTCTGCTCTTAACATG
TTCCGCCAAATGGATCTTAAGGGACAAACCCAGGCCGATACCCAACTTAA
GACTACGCATCAGAATACCATCAGCACCGTTAGAGTCTACGAGGAGGCCG
ATGGCGTCGTTCGCAAGTTCAGCAACCGCAACGCCTACGTCTGGGAGCGG
ACCCCCACGGGTTGGAAGCCAACGCTGGTTCTCCTTCGGATAAACAGGGC
TGCTACATTTGTACGGTGGTCACCATCTGAGCAGAAGTTCGCTGTTGGAT
CTGGTGCTCGCGTGATCGCGGTGTGCTATTTTGAAGAGGAGAATGACTGG
TGGATCTCGAAGCACTTGAAGAAGCCCATCCGCAGCACTATTACAACCCT
TGCTTGGCATCCAAACTCCGTTCTTCTGGCTGCGGGGTCGACTGACTCCC
ATGCCCGGGTGCTTTCTAGCTTCATCAAGGGTGTCGACACGCGCCCGGAG
CCCAGTGCCTGGGGTGAACGGCTGCCTTTCAACACAATTTGTGGCGAATT
CTTAAATGACTCGGCGGGCTGGATTCAAGGTGTCTCCTTCTCTCCCAGTG
GAGATGCGCTTGCCTTTACTGGCCATGATAGCAGTGTCACCGTCGTATAT
CCGAGCGCGCCGGAACAGCCGCCTCGGGCGATGTTGACCATCGCCACTCG
TCTTCTGCCTTTCAACAGTCTGATCTGGAACGGCGAGAACGAGATCATCG
CCGCAGGCCACATGGCCGCTCCCGAAGCTCATCACCTCTTCCACAACCCA
ATCGCCGATCATTCTTTCTCTCCGGATAAGGCGACCCTTGCAGTTGCGCG
GGAAAACAATGTGGAGCTTTATCAGAAGTCAGGCAACAAGTTCTCGTTGA
CCGATGAACTCAAGGGCCATGAGAAGACGGTGACTGGTGTGGATATCGCT
CCTAACAGTGGGCGTATCGTTACTTGTTCTCAGGCGAGCGGAGTCGATGG
CCGTGTTGTTATCTGGACCATCTAGGATTGCGAACCGTACCGCCTTCGCG
GTGACGAGAACGGATGGCAACTTGCTGGGACCATTGAGAGCAAGGCAGGG
CCGGGTGCTGGAAGCGCTCGCGAGGAGTCTGCTCTTAACATGTTCCGCCA
AATGGATCTTAAGGGACAAACCCAGGCCGATACCCAACTTAAGACTACGC
ATCAGAATACCATCAGCACCGTTAGAGTCTACGAGGAGGCCGATGGCGTC
GTTCGCAAGTTCAGCAACCGCAACGCCTACGTCTGGGAGCGGACCCCCAC
GGGTTGGAAGCCAACGCTGGTTCTCCTTCGGATAAACAGGGCTGCTACAT
TTGTACGGTGGTCACCATCTGAGCAGAAGTTCGCTGTTGGATCTGGTGCT
CGCGTGATCGCGGTGTGCTATTTTGAAGAGGAGAATGACTGGTGGATCTC
GAAGCACTTGAAGAAGCCCATCCGCAGCACTATTACAACCCTTGCTTGGC
ATCCAAACTCCGTTCTTCTGGCTGCGGGGTCGACTGACTCCCATGCCCGG
GTGCTTTCTAGCTTCATCAAGGGTGTCGACACGCGCCCGGAGCCCAGTGC
CTGGGGTGAACGGCTGCCTTTCAACACAATTTGTGGCGAATTCTTAAATG
ACTCGGCGGGCTGGATTCAAGGTGTCTCCTTCTCTCCCAGTGGAGATGCG
CTTGCCTTTACTGGCCATGATAGCAGTGTCACCGTCGTATATCCGAGCGC
GCCGGAACAGCCGCCTCGGGCGATGTTGACCATCGCCACTCGTCTTCTGC
CTTTCAACAGTCTGATCTGGAACGGCGAGAACGAGATCATCGCCGCAGGC
CACATGGCCGCTCCCGAAGCTCATCACCTCTTCCACAACCCAATCGCCGA
TCATTCTTTCTCTCCGGATAAGGCGACCCTTGCAGTTGCGCGGGAAAACA
ATGTGGAGCTTTATCAGAAGTCAGGCAACAAGTTCTCGTTGACCGATGAA
CTCAAGGGCCATGAGAAGACGGTGACTGGTGTGGATATCGCTCCTAACAG
TGGGCGTATCGTTACTTGTTCTCAGGCGAGCGGAGTCGATGGCCGTGTTG
TTATCTGGACCATCTAGGATTGCGAACCGTACCGCCTTCGCGGTGACGAG
AACGGATGGCAACTTGCTGGGACCATTGAGAGCAAGGCAGGGCCGGGTGC
TGGAAGCGCTCGCGAGGAGTCTGCTCTTAACATGTTCCGCCAAATGGATC
TTAAGGGACAAACCCAGGCCGATACCCAACTTAAGACTACGCATCAGAAT
ACCATCAGCACCGTTAGAGTCTACGAGGAGGCCGATGGCGTCGTTCGCAA
GTTCAGCAACCGCAACGCCTACGTCTGGGAGCGGACCCCCACGGGTTGGA
AGCCAACGCTGGTTCTCCTTCGGATAAACAGGGCTGCTACATTTGTACGG
TGGTCACCATCTGAGCAGAAGTTCGCTGTTGGATCTGGTGCTCGCGTGAT
CGCGGTGTGCTATTTTGAAGAGGAGAATGACTGGTGGATCTCGAAGCACT
TGAAGAAGCCCATCCGCAGCACTATTACAACCCTTGCTTGGCATCCAAAC
TCCGTTCTTCTGGCTGCGGGGTCGACTGACTCCCATGCCCGGGTGCTTTC
TAGCTTCATCAAGGGTGTCGACACGCGCCCGGAGCCCAGTGCCTGGGGTG
AACGGCTGCCTTTCAACACAATTTGTGGCGAATTCTTAAATGACTCGGCG
GGCTGGATTCAAGGTGTCTCCTTCTCTCCCAGTGGAGATGCGCTTGCCTT
TACTGGCCATGATAGCAGTGTCACCGTCGTATATCCGAGCGCGCCGGAAC
AGCCGCCTCGGGCGATGTTGACCATCGCCACTCGTCTTCTGCCTTTCAAC
AGTCTGATCTGGAACGGCGAGAACGAGATCATCGCCGCAGGCCACATGGC
CGCTCCCGAAGCTCATCACCTCTTCCACAACCCAATCGCCGATCATTCTT
TCTCTCCGGATAAGGCGACCCTTGCAGTTGCGCGGGAAAACAATGTGGAG
CTTTATCAGAAGTCAGGCAACAAGTTCTCGTTGACCGATGAACTCAAGGG
CCATGAGAAGACGGTGACTGGTGTGGATATCGCTCCTAACAGTGGGCGTA
TCGTTACTTGTTCTCAGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0015629actin cytoskeleton
GO:0005885Arp2/3 protein complex
Vocabulary: Biological Process
TermDefinition
GO:0030833regulation of actin filament polymerization
GO:0034314Arp2/3 complex-mediated actin nucleation
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_149517M747DRAFT_149517Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_149517-T1M747DRAFT_149517-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_149517-T1.cdsM747DRAFT_149517-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_149517-T1.utr3p1M747DRAFT_149517-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_149517-T1.exon4M747DRAFT_149517-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_149517-T1.exon3M747DRAFT_149517-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_149517-T1.exon2M747DRAFT_149517-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_149517-T1.exon1M747DRAFT_149517-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_149517-T1.utr5p1M747DRAFT_149517-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09262VPD
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR017986
DBxrefInterPro:IPR017383
DBxrefInterPro:IPR015943
DBxrefInterPro:IPR001680
DBxrefPFAM:PF00400
Product subunit 1
Productactin-related protein 2/3 complex
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851904.1supercontigKZ851904.1:53209..54649 -
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