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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851904.1:288697..290111- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_150820-T1 ID=M747DRAFT_150820-T1|Name=M747DRAFT_150820-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1415bp|location=Sequence derived from alignment at KZ851904.1:288697..290111- (Aspergillus niger ATCC 13496)
CGAGTCTTGCTGCCTTTCCTCCCGCTTCCAGTCACGTCTGCTTTTTCCTG
GTTCGTCTCGCGTTGCGGTTCTCCTCAATTTTCCTGGTGGTACAGCTTAT
CGCCTAATCGGTTTATATAGTGTAATACCTCGCCGCCCTAATGTCGCTTT
TCGGTTCCGTCGGCGCCGCGACGACCTCAGCTGGTCAGACCAACACCACA
GGTGATATCTCCAAGGATGTCGCCCTGAACCAACCTCCCGAGGACAGTAT
TTCGGACCTCCGCTTCTCCCCGGCTAGTGAACACCTCGCTGTAGCCTCAT
GGGACAAGAAGGTTCGCATTTACGAGATCAATGAGCAGGGCCAGAGCGAA
GGTAAAGCTCTGTTCGAGCACGAGGCCCCCGTTCTGAGCTGTTGCTGGTC
GCCGGTGAGCTCGCCCTCATTTCCTTGTCGCAGTATCTACAGTTAACTGA
TATGGACTCTGCTGCTACCTAGGATGGTACGAAAGTGGTCGGAGCTGGCG
CCGACAAAGCCGCTCGGATGCTCGACCTTGCAACCAATGCGACCACTCAA
GTCGCCGCTCACGATGCGCCCATCAAATGCTGCCACATGATCCCAAACCC
GGCTGGAGGGAGCCCGCTACTCGTAACCGGTTCTTGGGACAAGACCATCA
AGTACTGGGACTTGCGACAGTCAAACCCCATCGCCTCGGTGGAGTGCCAG
GAGCGTGTTTACACCATGGATGTCAAGGACAAACTCCTCGTGGTCGGCAC
CGCAGACCGCTATATCAACGTCATCAACCTCGACCAACCCACCAAATTCT
ACAAAACCATGCAGTCCCCTCTCAAGTGGCAGACGCGGGTAGTCAGCTGC
TTTTCGACTGCCACCGGGTTCGCCGTCGGCAGTGTCGAGGGCCGCTGTGC
GATCCAGTATGTCGAGGACAAGGACTCCTCCAACAACTTCAGTTTCAAGT
GCCACCGTGAGACTCCTCAGCGCGATGTCAACAACATCTACTCCGTCAAC
GCCATCTCCTTCCACCCTGTCCACGGCACCTTCAGCACCGCCGGCAGTGA
CGGCACCTTCCACTTCTGGGACAAGGACGCCAAGCATCGTCTAAAGGGAT
ATCCCTCCGTGGGCGGTACCATCTCCAGCACTGCCTTCAACCGCAACGGC
AACATCTTCGCCTACGCTGTCAGTTACGACTGGAGCAAGGGGTACTCCGC
CAACACCCAGCAACTGCCCAACAAGGTTATGCTGCACCCTGTCAGCCAAG
AGGAAGTGAAGCCTAGACCAAACAACCGGAAGAGGTAATGGAGTGGATTG
GGAGAAGGCTATGTAGTTGGAAGGGATCTGCACATGGAGGCGTCGTGGAG
GCCAAACCTTTCGATTTCAAATGGACTTTTGGCGGGGCTCATACATCTGG
AATATCATGCTTCGG back to topCoding sequence (CDS) from alignment at KZ851904.1:288697..290111- >M747DRAFT_150820-T1 ID=M747DRAFT_150820-T1|Name=M747DRAFT_150820-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2160bp|location=Sequence derived from alignment at KZ851904.1:288697..290111- (Aspergillus niger ATCC 13496)
GATGGTACGAAAGTGGTCGGAGCTGGCGCCGACAAAGCCGCTCGGATGCT
CGACCTTGCAACCAATGCGACCACTCAAGTCGCCGCTCACGATGCGCCCA
TCAAATGCTGCCACATGATCCCAAACCCGGCTGGAGGGAGCCCGCTACTC
GTAACCGGTTCTTGGGACAAGACCATCAAGTACTGGGACTTGCGACAGTC
AAACCCCATCGCCTCGGTGGAGTGCCAGGAGCGTGTTTACACCATGGATG
TCAAGGACAAACTCCTCGTGGTCGGCACCGCAGACCGCTATATCAACGTC
ATCAACCTCGACCAACCCACCAAATTCTACAAAACCATGCAGTCCCCTCT
CAAGTGGCAGACGCGGGTAGTCAGCTGCTTTTCGACTGCCACCGGGTTCG
CCGTCGGCAGTGTCGAGGGCCGCTGTGCGATCCAGTATGTCGAGGACAAG
GACTCCTCCAACAACTTCAGTTTCAAGTGCCACCGTGAGACTCCTCAGCG
CGATGTCAACAACATCTACTCCGTCAACGCCATCTCCTTCCACCCTGTCC
ACGGCACCTTCAGCACCGCCGGCAGTGACGGCACCTTCCACTTCTGGGAC
AAGGACGCCAAGCATCGTCTAAAGGGATATCCCTCCGTGGGCGGTACCAT
CTCCAGCACTGCCTTCAACCGCAACGGCAACATCTTCGCCTACGCTGTCA
GTTACGACTGGAGCAAGGGGTACTCCGCCAACACCCAGCAACTGCCCAAC
AAGGTTATGCTGCACCCTGTCAGCCAAGAGGAAGTGAAGCCTAGACCAAA
CAACCGGAAGAGGTAAATGTCGCTTTTCGGTTCCGTCGGCGCCGCGACGA
CCTCAGCTGGTCAGACCAACACCACAGGTGATATCTCCAAGGATGTCGCC
CTGAACCAACCTCCCGAGGACAGTATTTCGGACCTCCGCTTCTCCCCGGC
TAGTGAACACCTCGCTGTAGCCTCATGGGACAAGAAGGTTCGCATTTACG
AGATCAATGAGCAGGGCCAGAGCGAAGGTAAAGCTCTGTTCGAGCACGAG
GCCCCCGTTCTGAGCTGTTGCTGGTCGCCGGATGGTACGAAAGTGGTCGG
AGCTGGCGCCGACAAAGCCGCTCGGATGCTCGACCTTGCAACCAATGCGA
CCACTCAAGTCGCCGCTCACGATGCGCCCATCAAATGCTGCCACATGATC
CCAAACCCGGCTGGAGGGAGCCCGCTACTCGTAACCGGTTCTTGGGACAA
GACCATCAAGTACTGGGACTTGCGACAGTCAAACCCCATCGCCTCGGTGG
AGTGCCAGGAGCGTGTTTACACCATGGATGTCAAGGACAAACTCCTCGTG
GTCGGCACCGCAGACCGCTATATCAACGTCATCAACCTCGACCAACCCAC
CAAATTCTACAAAACCATGCAGTCCCCTCTCAAGTGGCAGACGCGGGTAG
TCAGCTGCTTTTCGACTGCCACCGGGTTCGCCGTCGGCAGTGTCGAGGGC
CGCTGTGCGATCCAGTATGTCGAGGACAAGGACTCCTCCAACAACTTCAG
TTTCAAGTGCCACCGTGAGACTCCTCAGCGCGATGTCAACAACATCTACT
CCGTCAACGCCATCTCCTTCCACCCTGTCCACGGCACCTTCAGCACCGCC
GGCAGTGACGGCACCTTCCACTTCTGGGACAAGGACGCCAAGCATCGTCT
AAAGGGATATCCCTCCGTGGGCGGTACCATCTCCAGCACTGCCTTCAACC
GCAACGGCAACATCTTCGCCTACGCTGTCAGTTACGACTGGAGCAAGGGG
TACTCCGCCAACACCCAGCAACTGCCCAACAAGGTTATGCTGCACCCTGT
CAGCCAAGAGGAAGTGAAGCCTAGACCAAACAACCGGAAGAGGTAAATGT
CGCTTTTCGGTTCCGTCGGCGCCGCGACGACCTCAGCTGGTCAGACCAAC
ACCACAGGTGATATCTCCAAGGATGTCGCCCTGAACCAACCTCCCGAGGA
CAGTATTTCGGACCTCCGCTTCTCCCCGGCTAGTGAACACCTCGCTGTAG
CCTCATGGGACAAGAAGGTTCGCATTTACGAGATCAATGAGCAGGGCCAG
AGCGAAGGTAAAGCTCTGTTCGAGCACGAGGCCCCCGTTCTGAGCTGTTG
CTGGTCGCCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR017986 |
| DBxref | InterPro:IPR015943 |
| DBxref | InterPro:IPR001680 |
| DBxref | InterPro:IPR020472 |
| DBxref | PFAM:PF00400 |
| Product | RNA export factor gle2 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851904.1 | supercontig | KZ851904.1:288697..290111 - |
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