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M747DRAFT_225973-T1, M747DRAFT_225973-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_225973-T1
Unique NameM747DRAFT_225973-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851904.1:771514..771972-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_225973-T1 ID=M747DRAFT_225973-T1|Name=M747DRAFT_225973-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=459bp|location=Sequence derived from alignment at KZ851904.1:771514..771972- (Aspergillus niger ATCC 13496)
GGCGACAAGAAGAAGCGTGGAAAGACCAGGAAGGAGACCTACTCGTCTTA
CATCTACAAGGGTGAGTAATCTTAAGACTTGTATTCCTAGTCAATAGTTG
TTGACTGTGTTATAGTCTTGAAGCAGGTCCACCCTGATACCGGTATCTCG
ACTCGTGCTATGTCCATCCTGAACTCCTTTGTCAATGGTATGTCGTGAAT
GAAGCAGGGTTATACCTTCAGCAAGCACCTAACGCGGTCTAGATATCTTC
GAGCGTGTCGCGACCGAGGCCTCGAAACTTGCCGCTTACAACAAGAAGTC
CACCATCTCTTCACGGGAGATCCAGACCTCGTAAGTCCTCTGTCGATCAA
GATAGTAGCAATTCGCTAACACCTCTCTAGTGTGAGGCTCATCCTTCCCG
GTGAATTGGCGAAGCACGCGGTGTCGGAAGGCACCAAGGCTGTCACGAAG
TACTCGTCG
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Coding sequence (CDS) from alignment at KZ851904.1:771514..771972-

>M747DRAFT_225973-T1 ID=M747DRAFT_225973-T1|Name=M747DRAFT_225973-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1200bp|location=Sequence derived from alignment at KZ851904.1:771514..771972- (Aspergillus niger ATCC 13496)
TGTGAGGCTCATCCTTCCCGGTGAATTGGCGAAGCACGCGGTGTCGGAAG
GCACCAAGGCTGTCACGAAGTACTCGTCGATATCTTCGAGCGTGTCGCGA
CCGAGGCCTCGAAACTTGCCGCTTACAACAAGAAGTCCACCATCTCTTCA
CGGGAGATCCAGACCTCTCTTGAAGCAGGTCCACCCTGATACCGGTATCT
CGACTCGTGCTATGTCCATCCTGAACTCCTTTGTCAATGGGCGACAAGAA
GAAGCGTGGAAAGACCAGGAAGGAGACCTACTCGTCTTACATCTACAAGG
TGTGAGGCTCATCCTTCCCGGTGAATTGGCGAAGCACGCGGTGTCGGAAG
GCACCAAGGCTGTCACGAAGTACTCGTCGATATCTTCGAGCGTGTCGCGA
CCGAGGCCTCGAAACTTGCCGCTTACAACAAGAAGTCCACCATCTCTTCA
CGGGAGATCCAGACCTCTCTTGAAGCAGGTCCACCCTGATACCGGTATCT
CGACTCGTGCTATGTCCATCCTGAACTCCTTTGTCAATGGGCGACAAGAA
GAAGCGTGGAAAGACCAGGAAGGAGACCTACTCGTCTTACATCTACAAGG
TGTGAGGCTCATCCTTCCCGGTGAATTGGCGAAGCACGCGGTGTCGGAAG
GCACCAAGGCTGTCACGAAGTACTCGTCGATATCTTCGAGCGTGTCGCGA
CCGAGGCCTCGAAACTTGCCGCTTACAACAAGAAGTCCACCATCTCTTCA
CGGGAGATCCAGACCTCTCTTGAAGCAGGTCCACCCTGATACCGGTATCT
CGACTCGTGCTATGTCCATCCTGAACTCCTTTGTCAATGGGCGACAAGAA
GAAGCGTGGAAAGACCAGGAAGGAGACCTACTCGTCTTACATCTACAAGG
TGTGAGGCTCATCCTTCCCGGTGAATTGGCGAAGCACGCGGTGTCGGAAG
GCACCAAGGCTGTCACGAAGTACTCGTCGATATCTTCGAGCGTGTCGCGA
CCGAGGCCTCGAAACTTGCCGCTTACAACAAGAAGTCCACCATCTCTTCA
CGGGAGATCCAGACCTCTCTTGAAGCAGGTCCACCCTGATACCGGTATCT
CGACTCGTGCTATGTCCATCCTGAACTCCTTTGTCAATGGGCGACAAGAA
GAAGCGTGGAAAGACCAGGAAGGAGACCTACTCGTCTTACATCTACAAGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000786nucleosome
Vocabulary: Molecular Function
TermDefinition
GO:0046982protein heterodimerization activity
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
HTB1M747DRAFT_225973Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_225973-T1M747DRAFT_225973-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_225973-T1.cdsM747DRAFT_225973-T1.cdsAspergillus niger ATCC 13496CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_225973-T1.exon4M747DRAFT_225973-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_225973-T1.exon3M747DRAFT_225973-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_225973-T1.exon2M747DRAFT_225973-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_225973-T1.exon1M747DRAFT_225973-T1.exon1Aspergillus niger ATCC 13496exon


Properties
Property NameValue
DBxrefInterPro:IPR009072
DBxrefInterPro:IPR007125
DBxrefInterPro:IPR000558
DBxrefPFAM:PF03847
DBxrefPFAM:PF00125
DBxrefPFAM:PF00808
Producthistone H2B
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851904.1supercontigKZ851904.1:771514..771972 -
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