You are here

Home

M747DRAFT_294345-T1, M747DRAFT_294345-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_294345-T1
Unique NameM747DRAFT_294345-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851908.1:248651..250083-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_294345-T1 ID=M747DRAFT_294345-T1|Name=M747DRAFT_294345-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1433bp|location=Sequence derived from alignment at KZ851908.1:248651..250083- (Aspergillus niger ATCC 13496)
CACTCAAATGTACTGCGAAATAGATATGTAAATGATGATGGTAGTCTGAT
AAGCCCATCCCATCCCATTCCAGCCCGATCGCGAATTGCAACCTACGCAA
ACAACCCCACATTGCGGGGCAGAAAGCCATTCCGTTGTCGCAATACCACC
AGAAACTGAAGAAATATTCCCTCTTCTTCTTCACATCACTCCCCTTTTTC
ATCTTCAATTTCCCACTCAATCCACCTCATCAATACACCTCAAAATGGCA
AAAACCCCCATCCTCATTCTCGACGGCGGTCTCGGCACCTCCCTCCAAGA
CCACTACAACATTACCTTCAGCAGCAGCACCACCCCTCTCTGGTCCTCGC
ACCTAATGATCTCCGACCCCTCGACCCTCCTCTCCTGCCAACGCGACTTC
ACCACCACCGCCGCCGTCGACGTCCTCCTAACTGCCACCTACCAAGTCTC
TCCGGAGGGCTTCCAGCGCACAAAAACCCCTTCCCACCCGACGGGAATCC
CCCGCGAGAGTATCGCCGGTTACCTTCGCACCGCCCTCGACGTCGCCGGA
CAAGCTGTGCAGAATACTTCCGCCTCCGTGGCGCTAAGTCTAGGTCCCTA
TGGCGCGTGCATGATCCCGGGACAAGAGTATAGTGGGAAGTATGACGGGG
AACATGATACCGAGGAGAAGCTGTGGAGGTGGCATACGGACCGGTTGGGA
CTTTTTAATGATGAGGCGATGGAGGGGATGAGGTTGGGAGAGAGGGTGAA
GTATATTGCTATGGAGACGGTGCCGAGGATTGATGAGGTGAGGGCTGTGA
GGAGGGCTGTGGGATCTTCTAGGTTTTGTGAGGGGATCCCGTTTTGGGTG
GCTTGTGTTTTTCCGATTGAGGATAAGGATACCCTGCCGGATGGAAGTAC
CGTTGATGAGGTGGTAGAGGCGGCGTTGTTGCCGATTGAGGGGGGTGCTA
CGCCGTGGGGAATTGGGATTAATTGTACGAAGCTTCATAAGTTGCCCCGG
TTGGTGAAATTGTTTGGGGATGCTGTGGAGAGGTTGTTGAGGGATGGGCG
TATTCAGGAGAGGCCTGCGTTGGTGCTGTATCCGGATGGCACGCAGGGGG
AGGTTTATAATACTGCTACGCAGACGTGGGAAAAGGTTCAAGATAAGAGT
GGTGCGGCTGATTCGGTAAGTGAACCTTTTGGATGTTGGTTGTGATATTG
AAGAGATATATGTGCTGACTGATTAGCGACCCTGGGAGGTGCAATTGGCA
CAGGTGGTCAATGACGCTAGCGCGACTGGCCAGTTCAGCTCTATCCTTGT
TGGCGGTTGCTGCAAGGCTTCGTTCAATGATATCAAGAGGCTTCGCGAAC
AGCTCCGCCCGCAATAAATTAAAACTTGTATAATATGTATATAGAAAGTA
TAAGACTTTTTTGACGGGTTGCAAATTGTTGAA
back to top

Coding sequence (CDS) from alignment at KZ851908.1:248651..250083-

>M747DRAFT_294345-T1 ID=M747DRAFT_294345-T1|Name=M747DRAFT_294345-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2124bp|location=Sequence derived from alignment at KZ851908.1:248651..250083- (Aspergillus niger ATCC 13496)
CGACCCTGGGAGGTGCAATTGGCACAGGTGGTCAATGACGCTAGCGCGAC
TGGCCAGTTCAGCTCTATCCTTGTTGGCGGTTGCTGCAAGGCTTCGTTCA
ATGATATCAAGAGGCTTCGCGAACAGCTCCGCCCGCAATAAATGGCAAAA
ACCCCCATCCTCATTCTCGACGGCGGTCTCGGCACCTCCCTCCAAGACCA
CTACAACATTACCTTCAGCAGCAGCACCACCCCTCTCTGGTCCTCGCACC
TAATGATCTCCGACCCCTCGACCCTCCTCTCCTGCCAACGCGACTTCACC
ACCACCGCCGCCGTCGACGTCCTCCTAACTGCCACCTACCAAGTCTCTCC
GGAGGGCTTCCAGCGCACAAAAACCCCTTCCCACCCGACGGGAATCCCCC
GCGAGAGTATCGCCGGTTACCTTCGCACCGCCCTCGACGTCGCCGGACAA
GCTGTGCAGAATACTTCCGCCTCCGTGGCGCTAAGTCTAGGTCCCTATGG
CGCGTGCATGATCCCGGGACAAGAGTATAGTGGGAAGTATGACGGGGAAC
ATGATACCGAGGAGAAGCTGTGGAGGTGGCATACGGACCGGTTGGGACTT
TTTAATGATGAGGCGATGGAGGGGATGAGGTTGGGAGAGAGGGTGAAGTA
TATTGCTATGGAGACGGTGCCGAGGATTGATGAGGTGAGGGCTGTGAGGA
GGGCTGTGGGATCTTCTAGGTTTTGTGAGGGGATCCCGTTTTGGGTGGCT
TGTGTTTTTCCGATTGAGGATAAGGATACCCTGCCGGATGGAAGTACCGT
TGATGAGGTGGTAGAGGCGGCGTTGTTGCCGATTGAGGGGGGTGCTACGC
CGTGGGGAATTGGGATTAATTGTACGAAGCTTCATAAGTTGCCCCGGTTG
GTGAAATTGTTTGGGGATGCTGTGGAGAGGTTGTTGAGGGATGGGCGTAT
TCAGGAGAGGCCTGCGTTGGTGCTGTATCCGGATGGCACGCAGGGGGAGG
TTTATAATACTGCTACGCAGACGTGGGAAAAGGTTCAAGATAAGAGTGGT
GCGGCTGATTCGCGACCCTGGGAGGTGCAATTGGCACAGGTGGTCAATGA
CGCTAGCGCGACTGGCCAGTTCAGCTCTATCCTTGTTGGCGGTTGCTGCA
AGGCTTCGTTCAATGATATCAAGAGGCTTCGCGAACAGCTCCGCCCGCAA
TAAATGGCAAAAACCCCCATCCTCATTCTCGACGGCGGTCTCGGCACCTC
CCTCCAAGACCACTACAACATTACCTTCAGCAGCAGCACCACCCCTCTCT
GGTCCTCGCACCTAATGATCTCCGACCCCTCGACCCTCCTCTCCTGCCAA
CGCGACTTCACCACCACCGCCGCCGTCGACGTCCTCCTAACTGCCACCTA
CCAAGTCTCTCCGGAGGGCTTCCAGCGCACAAAAACCCCTTCCCACCCGA
CGGGAATCCCCCGCGAGAGTATCGCCGGTTACCTTCGCACCGCCCTCGAC
GTCGCCGGACAAGCTGTGCAGAATACTTCCGCCTCCGTGGCGCTAAGTCT
AGGTCCCTATGGCGCGTGCATGATCCCGGGACAAGAGTATAGTGGGAAGT
ATGACGGGGAACATGATACCGAGGAGAAGCTGTGGAGGTGGCATACGGAC
CGGTTGGGACTTTTTAATGATGAGGCGATGGAGGGGATGAGGTTGGGAGA
GAGGGTGAAGTATATTGCTATGGAGACGGTGCCGAGGATTGATGAGGTGA
GGGCTGTGAGGAGGGCTGTGGGATCTTCTAGGTTTTGTGAGGGGATCCCG
TTTTGGGTGGCTTGTGTTTTTCCGATTGAGGATAAGGATACCCTGCCGGA
TGGAAGTACCGTTGATGAGGTGGTAGAGGCGGCGTTGTTGCCGATTGAGG
GGGGTGCTACGCCGTGGGGAATTGGGATTAATTGTACGAAGCTTCATAAG
TTGCCCCGGTTGGTGAAATTGTTTGGGGATGCTGTGGAGAGGTTGTTGAG
GGATGGGCGTATTCAGGAGAGGCCTGCGTTGGTGCTGTATCCGGATGGCA
CGCAGGGGGAGGTTTATAATACTGCTACGCAGACGTGGGAAAAGGTTCAA
GATAAGAGTGGTGCGGCTGATTCG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_294345M747DRAFT_294345Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_294345-T1M747DRAFT_294345-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_294345-T1.cdsM747DRAFT_294345-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_294345-T1.utr3p1M747DRAFT_294345-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_294345-T1.exon2M747DRAFT_294345-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_294345-T1.exon1M747DRAFT_294345-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_294345-T1.utr5p1M747DRAFT_294345-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036589
DBxrefInterPro:IPR003726
DBxrefPFAM:PF02574
ProductHomocysteine S-methyltransferase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851908.1supercontigKZ851908.1:248651..250083 -
Powered by Drupal