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M747DRAFT_295679-T1, M747DRAFT_295679-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_295679-T1
Unique NameM747DRAFT_295679-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851914.1:323121..324632-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_295679-T1 ID=M747DRAFT_295679-T1|Name=M747DRAFT_295679-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1512bp|location=Sequence derived from alignment at KZ851914.1:323121..324632- (Aspergillus niger ATCC 13496)
CGCCAGGCGGAACTTTCTCAATACTAACGTCCAGGTTCCTATATAGACAG
TCGCCATGGGTCGCGTGATCCGCAACCAGAGGAAGGGTCGTGGATCCATT
TTCAGTGAGTGCGACCGCAGAGATCCTGAAGCGAAATTCGCAGCATCTCC
AGATCAATTTTTACTGATACAATTTTTCGCTCGACAGCGGCAAACACCCG
TCTCAACAAGGCTCCTGCCCAGTTCCGCACCCTCGACTACGCCGAGCGTC
ATGGATACACTCGTGGTGTCGTGAAGGAGATCATCCACGACCCCGGCCGT
GGTGCTCCCCTCGCCAAGGTCCAGTTCCGTCACCCCTACAAGTTCAAGAC
CATCACCGAGACCTTCATCGCCAACGAGGGCATGTACACCGGTCAATTCG
TCTACGCCGGAAAGAACGCCGCCCTGACTGTCGGAAACGTCCTTCCCCTC
GCCTCCGTCCCTGAGGGTACCGTTGTGACCAACGTCGAGGAGAAGGCTGG
TGACCGTGGTGCTCTTGGTCGTACCTCCGGTAACTACGTTACCGTCATCG
GCCACAACCCCGAGGAGGGCAAGACCCGTGTCAAGCTTCCCTCCGGTGCC
AAGAAGGTCGTCAAGAACACCGCCCGTGGTATGATCGGTATCGTCGCTGG
TGGTGGTCGTACCGACAAGCCTTTGCTGAGTATGTCTCCGGAAATCTGGC
TCCGTTGAATCACTCTTCGGAGAGAATGCGGTTAAAGAAGAGGACTTTGA
TGGCTAACTCATTCCCTACAGAGGCTTCTCGCGCCAAGCACAAGTTCGCT
GTCAAGCGCAACTCTTGGCCCAAGACCCGTGGTGTTGCCATGAACCCCGT
GGATCACGTAAGGCTCCCTTCAATGATTTTGTCGATTTATCTACAGATTC
TGACATGTTTTCTCTACAGCCTCACGGTGGTGGTAACCACCAGCACATTG
GTAAGGCCTCGACCATCTCCCGCTACGCTGCCCAGGGTCAAAAAGCCGGT
CTTATCGCTGCCCGGAGAACTGGTCTGCTCCGTGGTACCCAGAAGACCAA
GGAGTAAGCGTGATATTGTGTGGAGTTTTCTTTGTGACGGGTTGAAAATG
CTCTTTTGCTATGAGGCATATGTACTTAGGCGACTGCGGATAATCTCCCA
CGCGTCCTTAGCGAATCTAGGTCGTGGCCACCAAATATTTTCATGATGAC
CAAAGCAAAAGAAATGGGTTCAAAAAATTCAAACTCGGGTGCATGTTTTT
TGAGATATCCTATTTTAAACGGTAGAACTAGGAAGATCTTTCCTGCAAGT
CATCAGGTCCGTCAAAAGAAACCGTATTGCGGGATTCGTACAAGAATTGG
TCTCTAGCTAGCCATGCGAGAGATTCAGAAGTAGACTTCGAATCTGCAAT
TGCTGCTACTTTGCTCAGCCATTTTGCTTGAGTCTCCTAAGATCAAGTAT
ATGCTACTTTTTCTCTTCATAGGTGTAAGCGAGCCATCGGATACACGCCG
TGAGTTATCGAG
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Coding sequence (CDS) from alignment at KZ851914.1:323121..324632-

>M747DRAFT_295679-T1 ID=M747DRAFT_295679-T1|Name=M747DRAFT_295679-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=3060bp|location=Sequence derived from alignment at KZ851914.1:323121..324632- (Aspergillus niger ATCC 13496)
CCTCACGGTGGTGGTAACCACCAGCACATTGGTAAGGCCTCGACCATCTC
CCGCTACGCTGCCCAGGGTCAAAAAGCCGGTCTTATCGCTGCCCGGAGAA
CTGGTCTGCTCCGTGGTACCCAGAAGACCAAGGAGTAAAGGCTTCTCGCG
CCAAGCACAAGTTCGCTGTCAAGCGCAACTCTTGGCCCAAGACCCGTGGT
GTTGCCATGAACCCCGTGGATCACCGGCAAACACCCGTCTCAACAAGGCT
CCTGCCCAGTTCCGCACCCTCGACTACGCCGAGCGTCATGGATACACTCG
TGGTGTCGTGAAGGAGATCATCCACGACCCCGGCCGTGGTGCTCCCCTCG
CCAAGGTCCAGTTCCGTCACCCCTACAAGTTCAAGACCATCACCGAGACC
TTCATCGCCAACGAGGGCATGTACACCGGTCAATTCGTCTACGCCGGAAA
GAACGCCGCCCTGACTGTCGGAAACGTCCTTCCCCTCGCCTCCGTCCCTG
AGGGTACCGTTGTGACCAACGTCGAGGAGAAGGCTGGTGACCGTGGTGCT
CTTGGTCGTACCTCCGGTAACTACGTTACCGTCATCGGCCACAACCCCGA
GGAGGGCAAGACCCGTGTCAAGCTTCCCTCCGGTGCCAAGAAGGTCGTCA
AGAACACCGCCCGTGGTATGATCGGTATCGTCGCTGGTGGTGGTCGTACC
GACAAGCCTTTGCTGAATGGGTCGCGTGATCCGCAACCAGAGGAAGGGTC
GTGGATCCATTTTCACCTCACGGTGGTGGTAACCACCAGCACATTGGTAA
GGCCTCGACCATCTCCCGCTACGCTGCCCAGGGTCAAAAAGCCGGTCTTA
TCGCTGCCCGGAGAACTGGTCTGCTCCGTGGTACCCAGAAGACCAAGGAG
TAAAGGCTTCTCGCGCCAAGCACAAGTTCGCTGTCAAGCGCAACTCTTGG
CCCAAGACCCGTGGTGTTGCCATGAACCCCGTGGATCACCGGCAAACACC
CGTCTCAACAAGGCTCCTGCCCAGTTCCGCACCCTCGACTACGCCGAGCG
TCATGGATACACTCGTGGTGTCGTGAAGGAGATCATCCACGACCCCGGCC
GTGGTGCTCCCCTCGCCAAGGTCCAGTTCCGTCACCCCTACAAGTTCAAG
ACCATCACCGAGACCTTCATCGCCAACGAGGGCATGTACACCGGTCAATT
CGTCTACGCCGGAAAGAACGCCGCCCTGACTGTCGGAAACGTCCTTCCCC
TCGCCTCCGTCCCTGAGGGTACCGTTGTGACCAACGTCGAGGAGAAGGCT
GGTGACCGTGGTGCTCTTGGTCGTACCTCCGGTAACTACGTTACCGTCAT
CGGCCACAACCCCGAGGAGGGCAAGACCCGTGTCAAGCTTCCCTCCGGTG
CCAAGAAGGTCGTCAAGAACACCGCCCGTGGTATGATCGGTATCGTCGCT
GGTGGTGGTCGTACCGACAAGCCTTTGCTGAATGGGTCGCGTGATCCGCA
ACCAGAGGAAGGGTCGTGGATCCATTTTCACCTCACGGTGGTGGTAACCA
CCAGCACATTGGTAAGGCCTCGACCATCTCCCGCTACGCTGCCCAGGGTC
AAAAAGCCGGTCTTATCGCTGCCCGGAGAACTGGTCTGCTCCGTGGTACC
CAGAAGACCAAGGAGTAAAGGCTTCTCGCGCCAAGCACAAGTTCGCTGTC
AAGCGCAACTCTTGGCCCAAGACCCGTGGTGTTGCCATGAACCCCGTGGA
TCACCGGCAAACACCCGTCTCAACAAGGCTCCTGCCCAGTTCCGCACCCT
CGACTACGCCGAGCGTCATGGATACACTCGTGGTGTCGTGAAGGAGATCA
TCCACGACCCCGGCCGTGGTGCTCCCCTCGCCAAGGTCCAGTTCCGTCAC
CCCTACAAGTTCAAGACCATCACCGAGACCTTCATCGCCAACGAGGGCAT
GTACACCGGTCAATTCGTCTACGCCGGAAAGAACGCCGCCCTGACTGTCG
GAAACGTCCTTCCCCTCGCCTCCGTCCCTGAGGGTACCGTTGTGACCAAC
GTCGAGGAGAAGGCTGGTGACCGTGGTGCTCTTGGTCGTACCTCCGGTAA
CTACGTTACCGTCATCGGCCACAACCCCGAGGAGGGCAAGACCCGTGTCA
AGCTTCCCTCCGGTGCCAAGAAGGTCGTCAAGAACACCGCCCGTGGTATG
ATCGGTATCGTCGCTGGTGGTGGTCGTACCGACAAGCCTTTGCTGAATGG
GTCGCGTGATCCGCAACCAGAGGAAGGGTCGTGGATCCATTTTCACCTCA
CGGTGGTGGTAACCACCAGCACATTGGTAAGGCCTCGACCATCTCCCGCT
ACGCTGCCCAGGGTCAAAAAGCCGGTCTTATCGCTGCCCGGAGAACTGGT
CTGCTCCGTGGTACCCAGAAGACCAAGGAGTAAAGGCTTCTCGCGCCAAG
CACAAGTTCGCTGTCAAGCGCAACTCTTGGCCCAAGACCCGTGGTGTTGC
CATGAACCCCGTGGATCACCGGCAAACACCCGTCTCAACAAGGCTCCTGC
CCAGTTCCGCACCCTCGACTACGCCGAGCGTCATGGATACACTCGTGGTG
TCGTGAAGGAGATCATCCACGACCCCGGCCGTGGTGCTCCCCTCGCCAAG
GTCCAGTTCCGTCACCCCTACAAGTTCAAGACCATCACCGAGACCTTCAT
CGCCAACGAGGGCATGTACACCGGTCAATTCGTCTACGCCGGAAAGAACG
CCGCCCTGACTGTCGGAAACGTCCTTCCCCTCGCCTCCGTCCCTGAGGGT
ACCGTTGTGACCAACGTCGAGGAGAAGGCTGGTGACCGTGGTGCTCTTGG
TCGTACCTCCGGTAACTACGTTACCGTCATCGGCCACAACCCCGAGGAGG
GCAAGACCCGTGTCAAGCTTCCCTCCGGTGCCAAGAAGGTCGTCAAGAAC
ACCGCCCGTGGTATGATCGGTATCGTCGCTGGTGGTGGTCGTACCGACAA
GCCTTTGCTGAATGGGTCGCGTGATCCGCAACCAGAGGAAGGGTCGTGGA
TCCATTTTCA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPL2M747DRAFT_295679Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295679-T1M747DRAFT_295679-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295679-T1.cdsM747DRAFT_295679-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295679-T1.utr3p1M747DRAFT_295679-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295679-T1.exon4M747DRAFT_295679-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_295679-T1.exon3M747DRAFT_295679-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_295679-T1.exon2M747DRAFT_295679-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_295679-T1.exon1M747DRAFT_295679-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_295679-T1.utr5p1M747DRAFT_295679-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR008991
DBxrefInterPro:IPR022671
DBxrefInterPro:IPR022666
DBxrefInterPro:IPR014722
DBxrefInterPro:IPR014726
DBxrefInterPro:IPR002171
DBxrefInterPro:IPR022669
DBxrefPFAM:PF03947
DBxrefPFAM:PF00181
Product60S ribosomal protein L2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851914.1supercontigKZ851914.1:323121..324632 -
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