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M747DRAFT_296158-T1, M747DRAFT_296158-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_296158-T1
Unique NameM747DRAFT_296158-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851917.1:38933..40485-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_296158-T1 ID=M747DRAFT_296158-T1|Name=M747DRAFT_296158-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1553bp|location=Sequence derived from alignment at KZ851917.1:38933..40485- (Aspergillus niger ATCC 13496)
TCCGGCCATGGCTGCTCCCCGACTTTTCCGCCCAGCAGCTCGTCTGCTTT
CTTCGCGCCTTACTTCGGCTCCCCTTCGCCCTCAGACCGCATGCGCGCCC
TCAATTCTTCGCTTCCGGGGATATGCTACGGAATCTGGAACCAAGGAGGT
CACTGTCCGTGATGCTCTGAACGAGGCGCTCGCCGAGGAGCTGGAGAGCA
ACAAGAAGACTTTCATTCTTGGAGAGGAGGTTGCGCAGTACAACGGAGCG
TATGGCACCCTGTCCCCCGTGTGAATTGGCTGCAGTCCATGGATCGCATA
TCTGAATTCGCTCTCCTATAGTTACAAGGTAACGAGGGGTCTGTTGGACC
GCTTCGGTCCCAAGCGGGTTATTGACACCCCCATCACGGAAGCCGGTTTC
TGTGGTCTCGCCGTCGGTGCTGCTCTTGCTGGACTGCACCCCATTGTGAG
TTCCCCGATTTGTGACCTTTGTATATCCCTTTGGATATTTAAGGTTCATC
AGATGCAAAGTGCACAGTATACTAAGACTTGCTGTCGATATTTAGTGCGA
GTTCATGACCTTCAACTTCGCCATGCAGGCTATCGATCATGTCATCAACT
CTGCTGCCAAGACCCACTACATGTCTGGTGGTATCCAGCCCTGCAACATC
ACCTTCCGTGGACCGAACGGTTTCGCCGCTGGTGTTGCCGCCCAGCACTC
CCAGGACTACTCCGCTTGGTACGGCAGTATCCCTGGTCTGAAGGTTGTCG
CTCCCTGGAGCTCGGAGGATGCCAAGGGTCTGTTGAAGGCTGCCATTCGC
GATCCTAACCCCGTCGTTGTTCTTGAGAACGAGTACGTGGCCCCCGTGGA
AGTATCGGAGTATTTGTGGAATGTTTTTGAACCTGACAATAATTGCATAG
GCTGCTGTACGGTCAGGCTTTCCCTATGAGCGAGGCCGCTCAGAAGGATG
ACTTTGTTCTTCCTATTGGCAAGGCCAAAATTGAGCGCCCCGGAAAGGAC
TTGACCATTGTCACCCTCTCCCGCTGCGTTGGACACTCGCTCAACGCTGC
TGCCCAGCTCAAGCAGAAGTACGGTGTTGACGCTGAGGTCATCAACCTTC
GTTCCGTCAAGCCCCTCGACGTTGAGACCATCATCCAGTCGCTCAAGAAG
ACTGGTCGCATCATGTGCGTCGAGTCCGGTTTCCCCATGTTCGGTGTCTC
CTCTGAGATCCTCGCTCTCTCCATGGAGTACGGTTTCGACTACCTGACTG
CTCCTGCCGTCCGTGTCACTGGCGCCGAGGTCCCCACCCCCTATGCCGTT
GGTCTCGAGAACATGAGCTTCCCCCAGGAGGACACCATTGTCAGCCAGGC
TGCCAAGCTGTTGCGCCTGTAAAGGATGAGCCGTTGTGTATGAACCGACG
GTGAAGAAAATCTGAATTAATAAAATCATGTGTCTAGTACCCTATCATTG
TTACAGCCATTTCTCCTATTTCCTCATATTACCTCGTTCTCCCACTTTCC
TGATCTTGTACGACTATACAACACAATCAACGTTATTCTGCATTCTTAGA
GAA
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Coding sequence (CDS) from alignment at KZ851917.1:38933..40485-

>M747DRAFT_296158-T1 ID=M747DRAFT_296158-T1|Name=M747DRAFT_296158-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=4500bp|location=Sequence derived from alignment at KZ851917.1:38933..40485- (Aspergillus niger ATCC 13496)
GCTGCTGTACGGTCAGGCTTTCCCTATGAGCGAGGCCGCTCAGAAGGATG
ACTTTGTTCTTCCTATTGGCAAGGCCAAAATTGAGCGCCCCGGAAAGGAC
TTGACCATTGTCACCCTCTCCCGCTGCGTTGGACACTCGCTCAACGCTGC
TGCCCAGCTCAAGCAGAAGTACGGTGTTGACGCTGAGGTCATCAACCTTC
GTTCCGTCAAGCCCCTCGACGTTGAGACCATCATCCAGTCGCTCAAGAAG
ACTGGTCGCATCATGTGCGTCGAGTCCGGTTTCCCCATGTTCGGTGTCTC
CTCTGAGATCCTCGCTCTCTCCATGGAGTACGGTTTCGACTACCTGACTG
CTCCTGCCGTCCGTGTCACTGGCGCCGAGGTCCCCACCCCCTATGCCGTT
GGTCTCGAGAACATGAGCTTCCCCCAGGAGGACACCATTGTCAGCCAGGC
TGCCAAGCTGTTGCGCCTGTAATGCGAGTTCATGACCTTCAACTTCGCCA
TGCAGGCTATCGATCATGTCATCAACTCTGCTGCCAAGACCCACTACATG
TCTGGTGGTATCCAGCCCTGCAACATCACCTTCCGTGGACCGAACGGTTT
CGCCGCTGGTGTTGCCGCCCAGCACTCCCAGGACTACTCCGCTTGGTACG
GCAGTATCCCTGGTCTGAAGGTTGTCGCTCCCTGGAGCTCGGAGGATGCC
AAGGGTCTGTTGAAGGCTGCCATTCGCGATCCTAACCCCGTCGTTGTTCT
TGAGAACGATTACAAGGTAACGAGGGGTCTGTTGGACCGCTTCGGTCCCA
AGCGGGTTATTGACACCCCCATCACGGAAGCCGGTTTCTGTGGTCTCGCC
GTCGGTGCTGCTCTTGCTGGACTGCACCCCATTATGGCTGCTCCCCGACT
TTTCCGCCCAGCAGCTCGTCTGCTTTCTTCGCGCCTTACTTCGGCTCCCC
TTCGCCCTCAGACCGCATGCGCGCCCTCAATTCTTCGCTTCCGGGGATAT
GCTACGGAATCTGGAACCAAGGAGGTCACTGTCCGTGATGCTCTGAACGA
GGCGCTCGCCGAGGAGCTGGAGAGCAACAAGAAGACTTTCATTCTTGGAG
AGGAGGTTGCGCAGTACAACGGAGCGCTGCTGTACGGTCAGGCTTTCCCT
ATGAGCGAGGCCGCTCAGAAGGATGACTTTGTTCTTCCTATTGGCAAGGC
CAAAATTGAGCGCCCCGGAAAGGACTTGACCATTGTCACCCTCTCCCGCT
GCGTTGGACACTCGCTCAACGCTGCTGCCCAGCTCAAGCAGAAGTACGGT
GTTGACGCTGAGGTCATCAACCTTCGTTCCGTCAAGCCCCTCGACGTTGA
GACCATCATCCAGTCGCTCAAGAAGACTGGTCGCATCATGTGCGTCGAGT
CCGGTTTCCCCATGTTCGGTGTCTCCTCTGAGATCCTCGCTCTCTCCATG
GAGTACGGTTTCGACTACCTGACTGCTCCTGCCGTCCGTGTCACTGGCGC
CGAGGTCCCCACCCCCTATGCCGTTGGTCTCGAGAACATGAGCTTCCCCC
AGGAGGACACCATTGTCAGCCAGGCTGCCAAGCTGTTGCGCCTGTAATGC
GAGTTCATGACCTTCAACTTCGCCATGCAGGCTATCGATCATGTCATCAA
CTCTGCTGCCAAGACCCACTACATGTCTGGTGGTATCCAGCCCTGCAACA
TCACCTTCCGTGGACCGAACGGTTTCGCCGCTGGTGTTGCCGCCCAGCAC
TCCCAGGACTACTCCGCTTGGTACGGCAGTATCCCTGGTCTGAAGGTTGT
CGCTCCCTGGAGCTCGGAGGATGCCAAGGGTCTGTTGAAGGCTGCCATTC
GCGATCCTAACCCCGTCGTTGTTCTTGAGAACGATTACAAGGTAACGAGG
GGTCTGTTGGACCGCTTCGGTCCCAAGCGGGTTATTGACACCCCCATCAC
GGAAGCCGGTTTCTGTGGTCTCGCCGTCGGTGCTGCTCTTGCTGGACTGC
ACCCCATTATGGCTGCTCCCCGACTTTTCCGCCCAGCAGCTCGTCTGCTT
TCTTCGCGCCTTACTTCGGCTCCCCTTCGCCCTCAGACCGCATGCGCGCC
CTCAATTCTTCGCTTCCGGGGATATGCTACGGAATCTGGAACCAAGGAGG
TCACTGTCCGTGATGCTCTGAACGAGGCGCTCGCCGAGGAGCTGGAGAGC
AACAAGAAGACTTTCATTCTTGGAGAGGAGGTTGCGCAGTACAACGGAGC
GCTGCTGTACGGTCAGGCTTTCCCTATGAGCGAGGCCGCTCAGAAGGATG
ACTTTGTTCTTCCTATTGGCAAGGCCAAAATTGAGCGCCCCGGAAAGGAC
TTGACCATTGTCACCCTCTCCCGCTGCGTTGGACACTCGCTCAACGCTGC
TGCCCAGCTCAAGCAGAAGTACGGTGTTGACGCTGAGGTCATCAACCTTC
GTTCCGTCAAGCCCCTCGACGTTGAGACCATCATCCAGTCGCTCAAGAAG
ACTGGTCGCATCATGTGCGTCGAGTCCGGTTTCCCCATGTTCGGTGTCTC
CTCTGAGATCCTCGCTCTCTCCATGGAGTACGGTTTCGACTACCTGACTG
CTCCTGCCGTCCGTGTCACTGGCGCCGAGGTCCCCACCCCCTATGCCGTT
GGTCTCGAGAACATGAGCTTCCCCCAGGAGGACACCATTGTCAGCCAGGC
TGCCAAGCTGTTGCGCCTGTAATGCGAGTTCATGACCTTCAACTTCGCCA
TGCAGGCTATCGATCATGTCATCAACTCTGCTGCCAAGACCCACTACATG
TCTGGTGGTATCCAGCCCTGCAACATCACCTTCCGTGGACCGAACGGTTT
CGCCGCTGGTGTTGCCGCCCAGCACTCCCAGGACTACTCCGCTTGGTACG
GCAGTATCCCTGGTCTGAAGGTTGTCGCTCCCTGGAGCTCGGAGGATGCC
AAGGGTCTGTTGAAGGCTGCCATTCGCGATCCTAACCCCGTCGTTGTTCT
TGAGAACGATTACAAGGTAACGAGGGGTCTGTTGGACCGCTTCGGTCCCA
AGCGGGTTATTGACACCCCCATCACGGAAGCCGGTTTCTGTGGTCTCGCC
GTCGGTGCTGCTCTTGCTGGACTGCACCCCATTATGGCTGCTCCCCGACT
TTTCCGCCCAGCAGCTCGTCTGCTTTCTTCGCGCCTTACTTCGGCTCCCC
TTCGCCCTCAGACCGCATGCGCGCCCTCAATTCTTCGCTTCCGGGGATAT
GCTACGGAATCTGGAACCAAGGAGGTCACTGTCCGTGATGCTCTGAACGA
GGCGCTCGCCGAGGAGCTGGAGAGCAACAAGAAGACTTTCATTCTTGGAG
AGGAGGTTGCGCAGTACAACGGAGCGCTGCTGTACGGTCAGGCTTTCCCT
ATGAGCGAGGCCGCTCAGAAGGATGACTTTGTTCTTCCTATTGGCAAGGC
CAAAATTGAGCGCCCCGGAAAGGACTTGACCATTGTCACCCTCTCCCGCT
GCGTTGGACACTCGCTCAACGCTGCTGCCCAGCTCAAGCAGAAGTACGGT
GTTGACGCTGAGGTCATCAACCTTCGTTCCGTCAAGCCCCTCGACGTTGA
GACCATCATCCAGTCGCTCAAGAAGACTGGTCGCATCATGTGCGTCGAGT
CCGGTTTCCCCATGTTCGGTGTCTCCTCTGAGATCCTCGCTCTCTCCATG
GAGTACGGTTTCGACTACCTGACTGCTCCTGCCGTCCGTGTCACTGGCGC
CGAGGTCCCCACCCCCTATGCCGTTGGTCTCGAGAACATGAGCTTCCCCC
AGGAGGACACCATTGTCAGCCAGGCTGCCAAGCTGTTGCGCCTGTAATGC
GAGTTCATGACCTTCAACTTCGCCATGCAGGCTATCGATCATGTCATCAA
CTCTGCTGCCAAGACCCACTACATGTCTGGTGGTATCCAGCCCTGCAACA
TCACCTTCCGTGGACCGAACGGTTTCGCCGCTGGTGTTGCCGCCCAGCAC
TCCCAGGACTACTCCGCTTGGTACGGCAGTATCCCTGGTCTGAAGGTTGT
CGCTCCCTGGAGCTCGGAGGATGCCAAGGGTCTGTTGAAGGCTGCCATTC
GCGATCCTAACCCCGTCGTTGTTCTTGAGAACGATTACAAGGTAACGAGG
GGTCTGTTGGACCGCTTCGGTCCCAAGCGGGTTATTGACACCCCCATCAC
GGAAGCCGGTTTCTGTGGTCTCGCCGTCGGTGCTGCTCTTGCTGGACTGC
ACCCCATTATGGCTGCTCCCCGACTTTTCCGCCCAGCAGCTCGTCTGCTT
TCTTCGCGCCTTACTTCGGCTCCCCTTCGCCCTCAGACCGCATGCGCGCC
CTCAATTCTTCGCTTCCGGGGATATGCTACGGAATCTGGAACCAAGGAGG
TCACTGTCCGTGATGCTCTGAACGAGGCGCTCGCCGAGGAGCTGGAGAGC
AACAAGAAGACTTTCATTCTTGGAGAGGAGGTTGCGCAGTACAACGGAGC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PDB1M747DRAFT_296158Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_296158-T1M747DRAFT_296158-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_296158-T1.cdsM747DRAFT_296158-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_296158-T1.utr3p1M747DRAFT_296158-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_296158-T1.exon4M747DRAFT_296158-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_296158-T1.exon3M747DRAFT_296158-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_296158-T1.exon2M747DRAFT_296158-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_296158-T1.exon1M747DRAFT_296158-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_296158-T1.utr5p1M747DRAFT_296158-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR029061
DBxrefInterPro:IPR033248
DBxrefInterPro:IPR009014
DBxrefInterPro:IPR005475
DBxrefPFAM:PF02779
DBxrefPFAM:PF02780
Product beta subunit
Productpyruvate dehydrogenase E1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851917.1supercontigKZ851917.1:38933..40485 -
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