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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851920.1:360149..361982+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_296730-T1 ID=M747DRAFT_296730-T1|Name=M747DRAFT_296730-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1834bp|location=Sequence derived from alignment at KZ851920.1:360149..361982+ (Aspergillus niger ATCC 13496)
TCAAAGGTGACAGAATGTGGCATTGCCCGGAGATATCCTACTCCATGGTG
GGGTCGAACTAACTTGTTAGTTAGCACAAGGCTTGGGAGGCTCGATGGCG
GTCTCTTATATAAAGCTAGCAGCACAGCCTCGTGGTCATTCACTCACTGA
CCCTTTTCACTCTTCTTGACCACCACACTCACTTAGCTCGCTCTTACTGA
CTATAAAGCTCTCCCCAAATACAGACATCACTCCTCACATCAACTTTTCT
TGCCAAGGAAAATGAGGTGCATGAACCAAAGCACGTTTCTCCAAAACTAT
GTCTATGCCCTTGAGCATGACTTCTGCTCTCCCACTGGGGAGCCTGCCAC
CTGGGCGATTGGATATCCCAAGTACTGGGGTCAGGAAGCAGCGAAGATCC
AACTAGAGGGGCAGGCAAATGCGCTTGCTCTTAGCCCTGATAGCAAGATT
ATTGCCGTGGGGATTGACACCGAGATCCATATCTTTGATGCGGATACGCG
GAAACGTATTGAGGTGTTGAGAGGACACACGGGCACCGTGGAGAAGGTGA
AGTTCGCTCCAGAAATTATCAATACCGTGGATTCAGAAGACACCCGGTAC
ATCCTGGTGTCGACAGGCGAGGAACTTGAAGAGAGTGATGGAGATAGTGA
CCGCCATGAGGGATGTGATTTCGGGATCATCATCCTATGGGAGCTGGACG
AGCGCGGGAGACTCCGACAAAAGAAAGAGAAGCCAGTTGACATTGACACC
CTCACAAGCAGAACTCTCCAACCCCTTATGTCAGACCTAGTGTCCAACCA
CGGCTGGAAAAGTGATGAAAAAGCCATGGGGGCCCTAGACCAAGCCATGA
AAAAAGCCCTCCGAAAAGCCCTCCATCTACACGAACAAGAAAGCAAACAC
TATCTTCGAGGCGAACTAGCCTCCTTCGGTAGTCCCACATTCAGTTCAGA
CGGCAAGACATTGATCTATCTCAGCCAAAACGAAACAACCCAGCACGGAC
CTCGTGACCCTGCTCTCCTCCCATGCCTCAACCTCTGGGACATGCAGACC
CGGTCCCTCCGACACCGACTGCTCGGCCACACAGACGCCATAATGTGGGC
TGGGATGAGTCCAGACAATTCTCTAGTCGCGTCCATCGCATGGGATGGCA
GGGCACGAGTCTGGGACGCCAACTCCGGAGCCTGCATCCATGTACTGGTT
TCTGTGGACGGCCAGCTCTGGAGCGGTGCCTTCTCTCCCGATAGCAAGTA
CCTCGCTGTGAGCCAGGGAAGCCCCAGGACATATATCCATGTCTACGACC
TTCGAACAGGACAGTCCGTCTCTCGCTTCGACGGATTTCGCCGTTGGGCA
CGCACCTTGGCTTGGAGCCCTGACGGGACCGTGCTTGCAGGCGGAGGAGA
CGGCGGCACAGTGCGTCTTTGGGATCCGTTGAACGGTGAAGAGCGGATGC
GATGGCGTCTGGCTTTTGAGGATTCCCTGATGCGGAGCTTTGCCGGGATT
CAAAGCGTACAGTTCGTGGATAAGGGGAAGAAGCTGGTGTTTCGGACCCA
GGAAGGTACGGTGGAGACGTATGATATCGAAAGCAATCTCAAGCAGCAGT
TTACAAGACGTGCGGAGGACAGGATTGATAGGAGCCCTATGGCGAAAATG
GCTGTGTCAAGTGATGCTCGGCTGCTGGTCGTTCCGGACGCAGATGGGGG
TTTGAGACTATGGGGTCTTTAGATGGGGTGTTCCGGATGGGACAACGTGG
GAGGATATTCTCTCGAAATACTTAGGCGAAGATGTTGTAGTTGGTCAGAT
GTAGTAACTAATAGCATTGCCACATAGTCTTCTA back to topCoding sequence (CDS) from alignment at KZ851920.1:360149..361982+ >M747DRAFT_296730-T1 ID=M747DRAFT_296730-T1|Name=M747DRAFT_296730-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=1461bp|location=Sequence derived from alignment at KZ851920.1:360149..361982+ (Aspergillus niger ATCC 13496)
ATGAGGTGCATGAACCAAAGCACGTTTCTCCAAAACTATGTCTATGCCCT
TGAGCATGACTTCTGCTCTCCCACTGGGGAGCCTGCCACCTGGGCGATTG
GATATCCCAAGTACTGGGGTCAGGAAGCAGCGAAGATCCAACTAGAGGGG
CAGGCAAATGCGCTTGCTCTTAGCCCTGATAGCAAGATTATTGCCGTGGG
GATTGACACCGAGATCCATATCTTTGATGCGGATACGCGGAAACGTATTG
AGGTGTTGAGAGGACACACGGGCACCGTGGAGAAGGTGAAGTTCGCTCCA
GAAATTATCAATACCGTGGATTCAGAAGACACCCGGTACATCCTGGTGTC
GACAGGCGAGGAACTTGAAGAGAGTGATGGAGATAGTGACCGCCATGAGG
GATGTGATTTCGGGATCATCATCCTATGGGAGCTGGACGAGCGCGGGAGA
CTCCGACAAAAGAAAGAGAAGCCAGTTGACATTGACACCCTCACAAGCAG
AACTCTCCAACCCCTTATGTCAGACCTAGTGTCCAACCACGGCTGGAAAA
GTGATGAAAAAGCCATGGGGGCCCTAGACCAAGCCATGAAAAAAGCCCTC
CGAAAAGCCCTCCATCTACACGAACAAGAAAGCAAACACTATCTTCGAGG
CGAACTAGCCTCCTTCGGTAGTCCCACATTCAGTTCAGACGGCAAGACAT
TGATCTATCTCAGCCAAAACGAAACAACCCAGCACGGACCTCGTGACCCT
GCTCTCCTCCCATGCCTCAACCTCTGGGACATGCAGACCCGGTCCCTCCG
ACACCGACTGCTCGGCCACACAGACGCCATAATGTGGGCTGGGATGAGTC
CAGACAATTCTCTAGTCGCGTCCATCGCATGGGATGGCAGGGCACGAGTC
TGGGACGCCAACTCCGGAGCCTGCATCCATGTACTGGTTTCTGTGGACGG
CCAGCTCTGGAGCGGTGCCTTCTCTCCCGATAGCAAGTACCTCGCTGTGA
GCCAGGGAAGCCCCAGGACATATATCCATGTCTACGACCTTCGAACAGGA
CAGTCCGTCTCTCGCTTCGACGGATTTCGCCGTTGGGCACGCACCTTGGC
TTGGAGCCCTGACGGGACCGTGCTTGCAGGCGGAGGAGACGGCGGCACAG
TGCGTCTTTGGGATCCGTTGAACGGTGAAGAGCGGATGCGATGGCGTCTG
GCTTTTGAGGATTCCCTGATGCGGAGCTTTGCCGGGATTCAAAGCGTACA
GTTCGTGGATAAGGGGAAGAAGCTGGTGTTTCGGACCCAGGAAGGTACGG
TGGAGACGTATGATATCGAAAGCAATCTCAAGCAGCAGTTTACAAGACGT
GCGGAGGACAGGATTGATAGGAGCCCTATGGCGAAAATGGCTGTGTCAAG
TGATGCTCGGCTGCTGGTCGTTCCGGACGCAGATGGGGGTTTGAGACTAT
GGGGTCTTTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_8519201.3 |
| Note | SMCOG1173:WD-40 repeat-containing protein |
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR017986 |
| DBxref | InterPro:IPR019775 |
| DBxref | InterPro:IPR011659 |
| DBxref | InterPro:IPR015943 |
| DBxref | InterPro:IPR001680 |
| DBxref | PFAM:PF00400 |
| Product | WD40 repeat-like protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851920.1 | supercontig | KZ851920.1:360149..361982 + |
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