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Sequences
The following sequences are available for this feature:
mRNA from alignment at KZ851922.1:200999..203451+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >M747DRAFT_262468-T1 ID=M747DRAFT_262468-T1|Name=M747DRAFT_262468-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2453bp|location=Sequence derived from alignment at KZ851922.1:200999..203451+ (Aspergillus niger ATCC 13496)
CTCAGCTACAACACAGTTCTTGTAGGGAATCTGCTCATTCCGACTTCTAT
TTATACGACACCGAAACGTTCTATATTACAGAGTTAGAAACAACTTGGGG
GTTTCCGGATTTGAAACAGAAGGGTTCGCTCAAGTCAAGCTTGATACGCC
GGCACTCTCTAACCAAGCCAAAAGTGACCTCAATCCTATCCGCGCAATCT
TCGTTGCATTTGTTTTCTGTTCAGTTTAGTCCAGGAAAAAGACAAATTGC
AGCTATACCAAAATGTCAGGTCTCGATGTTGAGGCTCTCCTTGAGTCCAC
AGCTGCTCCGCCATCTCAAGACCCTCCCCGTTCCCAGGACCGCGATGACC
GCTCCTCCAAAACTGACAGTAACGAACGCCGGGACCGTGATCGGTCACGA
GAGAAGGACCGCAAGCGCAGGGACCGCAGCCGTGATCGACGTCGCTCGCG
AGATATCGATGGAGATGAAGACATGAAGAGCCCGAGAAGCGAACATGGCA
GTGCTAACGGAAGCCATAGAAGCAGAAAGAGGAGCAGGAGTCGTGATAGC
GAACGCCGTCGGTCTCGTCGTGACCGTTACGGTGACGAATACCGTTCTGG
TGGCGACTTCTACCGCGGTGGTGGACGGGCTCGCACTCGCTCTCGGTCGC
CTTACGATGATCGCTATTACCGCCCCTCGGGCCGCTCCCGTCGCGATGAG
CGAGATGAAGATAGACGCACTCGCCGTGACCGCAAACGAAGCCCGAGCCC
GAGAAGCCGCGAGAGGACCCCGGAGCCTACTGAGGATGAGCGTGACAGGC
GTACCATTTTCGTTCAGCAGCTTGCTGCGCGGTTGAGAACTAAGGAGCTG
ATTGCGTTCTTTGAGAAAGTCGGACCTGTCAAGGAAGCCCAGATCGTTAA
GGACCGTGTCAGTGGACGGTCTAAAGGGTGAGTTCCCTGCGTTTCCATAT
GACAGGAGAGCTGTGTACTAACTTTCACTAGTGTCGGTTATGTCGAGTTC
AAAAGCGAAGACTCCGTTGCGCCCGCTATCCAGCTTACCGGACAGAAACT
TCTAGGAATTCCCATAATCGCCCAACTGACTGAAGCGGAAAAGAACCGCC
AGGCCCGCAATCCCGAGGCCAGCAGCGGCAACAATCACGCTGCTCCATTT
CACAGGTTGTACGTGGGTAACATTCATTTCAGCATCACTGAAAGTGACCT
TCAGAACGTCTTTGAGCCTTTTGGCGAACTCGAATTTGTCCAGCTGCAGA
AGGATGAGACTGGTCGTAGCAGGGGTTATGGATTCGTGCAGTGAGTGTTA
CCCCTATACATTTTCCCTTCATGATTAGTAACTGTTGCTAATACCGTGTA
TAGGTTCCGTGATCCAAACCAGGCTCGTGAGGCTTTGGAAAAGATGAATG
GATTTGACCTTGCTGGTCGAGCAATCCGCGTTGGCCTTGGCAACGATAAG
TTCACTCCTGACTCGAACGCACAACGCATGCAGAGCCAAGGTGCAAACCA
ACATAACTTCCAGGGCTCTCTCTTCTCGGGTCACGGAGGACGTGGTGTTC
AAGCCGGCGGTACCAGCAACTTCGACCGCGCTGGTGGCCGTGACTCCGAA
AAGGGGGCCGGCGCTAGTGCATTGGACGATACGGATGTTGCCGGCGTAAA
TTTCAACAACTACAGTAGGGATGCATTGATGCGCAAGCTTGCAAGAACAG
ATGAACCATCCGAGCCTGCTGCCGATGACCAGCAGAAGGTGCTCCGTCCC
AAGACTGAGGCTAAGCCTCTGCCTGTTAACGTCAACATGGCAAGTCGGTG
TGTCATGCTCCGCAACATGTTTGACCCCAACGAGTAAGTTGCTCAATCAT
AGCTATCTGTCTTCTCTATACAGAATCTAACAATATCGCAGGGAGGAGGG
TGAAGCTTGGATTAAGGAGCTGGAGGATGACGTTCGCGCTGAGTGCGAAG
ACAAATATGGCCATGTTGTTCACATTGCACTAGATCCCAACTCGCAAGGC
GATATTTACCTGAAGTTCGACCGCGTCCAGGGTGGCGAGAACGCCATCAA
GGGCCTGAACGGGCGTTTCTTTGGTGGTCGACAGATCACCGCCCAGCCCG
TCGTCGACGCTGTCTACAGCAGTCTGTTCTCCCGAACCAAAGCGATCTAA
AGTATATGACATCGGCCCGCGCCTACCATGACCACATATGGGTAGGTATT
TCATCTAATTTATCTCTCTTACCAGGTGCAATCTGTGACGGCCGGACCAC
ACTTTGGCCTTTGAACTGTTGAGCGGTTGCTTCGGCATGGTGCTTGGCTT
GGATGACACTGCCCCTGGTAGGTGCCAGTCTTCTCGACATCTCACCCTTT
ATGGTTGTCTATCAGGCCGAGAGCCTCGTGGAATGATCTTGTCTATAGGG
ATTTGTACATTGCGTTAGCGCCAAATAGTCCATTTTTCGTAACCTTGTTA
ATT back to topCoding sequence (CDS) from alignment at KZ851922.1:200999..203451+ >M747DRAFT_262468-T1 ID=M747DRAFT_262468-T1|Name=M747DRAFT_262468-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=6852bp|location=Sequence derived from alignment at KZ851922.1:200999..203451+ (Aspergillus niger ATCC 13496)
ATGTCAGGTCTCGATGTTGAGGCTCTCCTTGAGTCCACAGCTGCTCCGCC
ATCTCAAGACCCTCCCCGTTCCCAGGACCGCGATGACCGCTCCTCCAAAA
CTGACAGTAACGAACGCCGGGACCGTGATCGGTCACGAGAGAAGGACCGC
AAGCGCAGGGACCGCAGCCGTGATCGACGTCGCTCGCGAGATATCGATGG
AGATGAAGACATGAAGAGCCCGAGAAGCGAACATGGCAGTGCTAACGGAA
GCCATAGAAGCAGAAAGAGGAGCAGGAGTCGTGATAGCGAACGCCGTCGG
TCTCGTCGTGACCGTTACGGTGACGAATACCGTTCTGGTGGCGACTTCTA
CCGCGGTGGTGGACGGGCTCGCACTCGCTCTCGGTCGCCTTACGATGATC
GCTATTACCGCCCCTCGGGCCGCTCCCGTCGCGATGAGCGAGATGAAGAT
AGACGCACTCGCCGTGACCGCAAACGAAGCCCGAGCCCGAGAAGCCGCGA
GAGGACCCCGGAGCCTACTGAGGATGAGCGTGACAGGCGTACCATTTTCG
TTCAGCAGCTTGCTGCGCGGTTGAGAACTAAGGAGCTGATTGCGTTCTTT
GAGAAAGTCGGACCTGTCAAGGAAGCCCAGATCGTTAAGGACCGTGTCAG
TGGACGGTCTAAAGGTGTCGGTTATGTCGAGTTCAAAAGCGAAGACTCCG
TTGCGCCCGCTATCCAGCTTACCGGACAGAAACTTCTAGGAATTCCCATA
ATCGCCCAACTGACTGAAGCGGAAAAGAACCGCCAGGCCCGCAATCCCGA
GGCCAGCAGCGGCAACAATCACGCTGCTCCATTTCACAGGTTGTACGTGG
GTAACATTCATTTCAGCATCACTGAAAGTGACCTTCAGAACGTCTTTGAG
CCTTTTGGCGAACTCGAATTTGTCCAGCTGCAGAAGGATGAGACTGGTCG
TAGCAGGGGTTATGGATTCGTGCAGTTCCGTGATCCAAACCAGGCTCGTG
AGGCTTTGGAAAAGATGAATGGATTTGACCTTGCTGGTCGAGCAATCCGC
GTTGGCCTTGGCAACGATAAGTTCACTCCTGACTCGAACGCACAACGCAT
GCAGAGCCAAGGTGCAAACCAACATAACTTCCAGGGCTCTCTCTTCTCGG
GTCACGGAGGACGTGGTGTTCAAGCCGGCGGTACCAGCAACTTCGACCGC
GCTGGTGGCCGTGACTCCGAAAAGGGGGCCGGCGCTAGTGCATTGGACGA
TACGGATGTTGCCGGCGTAAATTTCAACAACTACAGTAGGGATGCATTGA
TGCGCAAGCTTGCAAGAACAGATGAACCATCCGAGCCTGCTGCCGATGAC
CAGCAGAAGGTGCTCCGTCCCAAGACTGAGGCTAAGCCTCTGCCTGTTAA
CGTCAACATGGCAAGTCGGTGTGTCATGCTCCGCAACATGTTTGACCCCA
ACGAGGAGGAGGGTGAAGCTTGGATTAAGGAGCTGGAGGATGACGTTCGC
GCTGAGTGCGAAGACAAATATGGCCATGTTGTTCACATTGCACTAGATCC
CAACTCGCAAGGCGATATTTACCTGAAGTTCGACCGCGTCCAGGGTGGCG
AGAACGCCATCAAGGGCCTGAACGGGCGTTTCTTTGGTGGTCGACAGATC
ACCGCCCAGCCCGTCGTCGACGCTGTCTACAGCAGTCTGTTCTCCCGAAC
CAAAGCGATCTAAATGTCAGGTCTCGATGTTGAGGCTCTCCTTGAGTCCA
CAGCTGCTCCGCCATCTCAAGACCCTCCCCGTTCCCAGGACCGCGATGAC
CGCTCCTCCAAAACTGACAGTAACGAACGCCGGGACCGTGATCGGTCACG
AGAGAAGGACCGCAAGCGCAGGGACCGCAGCCGTGATCGACGTCGCTCGC
GAGATATCGATGGAGATGAAGACATGAAGAGCCCGAGAAGCGAACATGGC
AGTGCTAACGGAAGCCATAGAAGCAGAAAGAGGAGCAGGAGTCGTGATAG
CGAACGCCGTCGGTCTCGTCGTGACCGTTACGGTGACGAATACCGTTCTG
GTGGCGACTTCTACCGCGGTGGTGGACGGGCTCGCACTCGCTCTCGGTCG
CCTTACGATGATCGCTATTACCGCCCCTCGGGCCGCTCCCGTCGCGATGA
GCGAGATGAAGATAGACGCACTCGCCGTGACCGCAAACGAAGCCCGAGCC
CGAGAAGCCGCGAGAGGACCCCGGAGCCTACTGAGGATGAGCGTGACAGG
CGTACCATTTTCGTTCAGCAGCTTGCTGCGCGGTTGAGAACTAAGGAGCT
GATTGCGTTCTTTGAGAAAGTCGGACCTGTCAAGGAAGCCCAGATCGTTA
AGGACCGTGTCAGTGGACGGTCTAAAGGTGTCGGTTATGTCGAGTTCAAA
AGCGAAGACTCCGTTGCGCCCGCTATCCAGCTTACCGGACAGAAACTTCT
AGGAATTCCCATAATCGCCCAACTGACTGAAGCGGAAAAGAACCGCCAGG
CCCGCAATCCCGAGGCCAGCAGCGGCAACAATCACGCTGCTCCATTTCAC
AGGTTGTACGTGGGTAACATTCATTTCAGCATCACTGAAAGTGACCTTCA
GAACGTCTTTGAGCCTTTTGGCGAACTCGAATTTGTCCAGCTGCAGAAGG
ATGAGACTGGTCGTAGCAGGGGTTATGGATTCGTGCAGTTCCGTGATCCA
AACCAGGCTCGTGAGGCTTTGGAAAAGATGAATGGATTTGACCTTGCTGG
TCGAGCAATCCGCGTTGGCCTTGGCAACGATAAGTTCACTCCTGACTCGA
ACGCACAACGCATGCAGAGCCAAGGTGCAAACCAACATAACTTCCAGGGC
TCTCTCTTCTCGGGTCACGGAGGACGTGGTGTTCAAGCCGGCGGTACCAG
CAACTTCGACCGCGCTGGTGGCCGTGACTCCGAAAAGGGGGCCGGCGCTA
GTGCATTGGACGATACGGATGTTGCCGGCGTAAATTTCAACAACTACAGT
AGGGATGCATTGATGCGCAAGCTTGCAAGAACAGATGAACCATCCGAGCC
TGCTGCCGATGACCAGCAGAAGGTGCTCCGTCCCAAGACTGAGGCTAAGC
CTCTGCCTGTTAACGTCAACATGGCAAGTCGGTGTGTCATGCTCCGCAAC
ATGTTTGACCCCAACGAGGAGGAGGGTGAAGCTTGGATTAAGGAGCTGGA
GGATGACGTTCGCGCTGAGTGCGAAGACAAATATGGCCATGTTGTTCACA
TTGCACTAGATCCCAACTCGCAAGGCGATATTTACCTGAAGTTCGACCGC
GTCCAGGGTGGCGAGAACGCCATCAAGGGCCTGAACGGGCGTTTCTTTGG
TGGTCGACAGATCACCGCCCAGCCCGTCGTCGACGCTGTCTACAGCAGTC
TGTTCTCCCGAACCAAAGCGATCTAAATGTCAGGTCTCGATGTTGAGGCT
CTCCTTGAGTCCACAGCTGCTCCGCCATCTCAAGACCCTCCCCGTTCCCA
GGACCGCGATGACCGCTCCTCCAAAACTGACAGTAACGAACGCCGGGACC
GTGATCGGTCACGAGAGAAGGACCGCAAGCGCAGGGACCGCAGCCGTGAT
CGACGTCGCTCGCGAGATATCGATGGAGATGAAGACATGAAGAGCCCGAG
AAGCGAACATGGCAGTGCTAACGGAAGCCATAGAAGCAGAAAGAGGAGCA
GGAGTCGTGATAGCGAACGCCGTCGGTCTCGTCGTGACCGTTACGGTGAC
GAATACCGTTCTGGTGGCGACTTCTACCGCGGTGGTGGACGGGCTCGCAC
TCGCTCTCGGTCGCCTTACGATGATCGCTATTACCGCCCCTCGGGCCGCT
CCCGTCGCGATGAGCGAGATGAAGATAGACGCACTCGCCGTGACCGCAAA
CGAAGCCCGAGCCCGAGAAGCCGCGAGAGGACCCCGGAGCCTACTGAGGA
TGAGCGTGACAGGCGTACCATTTTCGTTCAGCAGCTTGCTGCGCGGTTGA
GAACTAAGGAGCTGATTGCGTTCTTTGAGAAAGTCGGACCTGTCAAGGAA
GCCCAGATCGTTAAGGACCGTGTCAGTGGACGGTCTAAAGGTGTCGGTTA
TGTCGAGTTCAAAAGCGAAGACTCCGTTGCGCCCGCTATCCAGCTTACCG
GACAGAAACTTCTAGGAATTCCCATAATCGCCCAACTGACTGAAGCGGAA
AAGAACCGCCAGGCCCGCAATCCCGAGGCCAGCAGCGGCAACAATCACGC
TGCTCCATTTCACAGGTTGTACGTGGGTAACATTCATTTCAGCATCACTG
AAAGTGACCTTCAGAACGTCTTTGAGCCTTTTGGCGAACTCGAATTTGTC
CAGCTGCAGAAGGATGAGACTGGTCGTAGCAGGGGTTATGGATTCGTGCA
GTTCCGTGATCCAAACCAGGCTCGTGAGGCTTTGGAAAAGATGAATGGAT
TTGACCTTGCTGGTCGAGCAATCCGCGTTGGCCTTGGCAACGATAAGTTC
ACTCCTGACTCGAACGCACAACGCATGCAGAGCCAAGGTGCAAACCAACA
TAACTTCCAGGGCTCTCTCTTCTCGGGTCACGGAGGACGTGGTGTTCAAG
CCGGCGGTACCAGCAACTTCGACCGCGCTGGTGGCCGTGACTCCGAAAAG
GGGGCCGGCGCTAGTGCATTGGACGATACGGATGTTGCCGGCGTAAATTT
CAACAACTACAGTAGGGATGCATTGATGCGCAAGCTTGCAAGAACAGATG
AACCATCCGAGCCTGCTGCCGATGACCAGCAGAAGGTGCTCCGTCCCAAG
ACTGAGGCTAAGCCTCTGCCTGTTAACGTCAACATGGCAAGTCGGTGTGT
CATGCTCCGCAACATGTTTGACCCCAACGAGGAGGAGGGTGAAGCTTGGA
TTAAGGAGCTGGAGGATGACGTTCGCGCTGAGTGCGAAGACAAATATGGC
CATGTTGTTCACATTGCACTAGATCCCAACTCGCAAGGCGATATTTACCT
GAAGTTCGACCGCGTCCAGGGTGGCGAGAACGCCATCAAGGGCCTGAACG
GGCGTTTCTTTGGTGGTCGACAGATCACCGCCCAGCCCGTCGTCGACGCT
GTCTACAGCAGTCTGTTCTCCCGAACCAAAGCGATCTAAATGTCAGGTCT
CGATGTTGAGGCTCTCCTTGAGTCCACAGCTGCTCCGCCATCTCAAGACC
CTCCCCGTTCCCAGGACCGCGATGACCGCTCCTCCAAAACTGACAGTAAC
GAACGCCGGGACCGTGATCGGTCACGAGAGAAGGACCGCAAGCGCAGGGA
CCGCAGCCGTGATCGACGTCGCTCGCGAGATATCGATGGAGATGAAGACA
TGAAGAGCCCGAGAAGCGAACATGGCAGTGCTAACGGAAGCCATAGAAGC
AGAAAGAGGAGCAGGAGTCGTGATAGCGAACGCCGTCGGTCTCGTCGTGA
CCGTTACGGTGACGAATACCGTTCTGGTGGCGACTTCTACCGCGGTGGTG
GACGGGCTCGCACTCGCTCTCGGTCGCCTTACGATGATCGCTATTACCGC
CCCTCGGGCCGCTCCCGTCGCGATGAGCGAGATGAAGATAGACGCACTCG
CCGTGACCGCAAACGAAGCCCGAGCCCGAGAAGCCGCGAGAGGACCCCGG
AGCCTACTGAGGATGAGCGTGACAGGCGTACCATTTTCGTTCAGCAGCTT
GCTGCGCGGTTGAGAACTAAGGAGCTGATTGCGTTCTTTGAGAAAGTCGG
ACCTGTCAAGGAAGCCCAGATCGTTAAGGACCGTGTCAGTGGACGGTCTA
AAGGTGTCGGTTATGTCGAGTTCAAAAGCGAAGACTCCGTTGCGCCCGCT
ATCCAGCTTACCGGACAGAAACTTCTAGGAATTCCCATAATCGCCCAACT
GACTGAAGCGGAAAAGAACCGCCAGGCCCGCAATCCCGAGGCCAGCAGCG
GCAACAATCACGCTGCTCCATTTCACAGGTTGTACGTGGGTAACATTCAT
TTCAGCATCACTGAAAGTGACCTTCAGAACGTCTTTGAGCCTTTTGGCGA
ACTCGAATTTGTCCAGCTGCAGAAGGATGAGACTGGTCGTAGCAGGGGTT
ATGGATTCGTGCAGTTCCGTGATCCAAACCAGGCTCGTGAGGCTTTGGAA
AAGATGAATGGATTTGACCTTGCTGGTCGAGCAATCCGCGTTGGCCTTGG
CAACGATAAGTTCACTCCTGACTCGAACGCACAACGCATGCAGAGCCAAG
GTGCAAACCAACATAACTTCCAGGGCTCTCTCTTCTCGGGTCACGGAGGA
CGTGGTGTTCAAGCCGGCGGTACCAGCAACTTCGACCGCGCTGGTGGCCG
TGACTCCGAAAAGGGGGCCGGCGCTAGTGCATTGGACGATACGGATGTTG
CCGGCGTAAATTTCAACAACTACAGTAGGGATGCATTGATGCGCAAGCTT
GCAAGAACAGATGAACCATCCGAGCCTGCTGCCGATGACCAGCAGAAGGT
GCTCCGTCCCAAGACTGAGGCTAAGCCTCTGCCTGTTAACGTCAACATGG
CAAGTCGGTGTGTCATGCTCCGCAACATGTTTGACCCCAACGAGGAGGAG
GGTGAAGCTTGGATTAAGGAGCTGGAGGATGACGTTCGCGCTGAGTGCGA
AGACAAATATGGCCATGTTGTTCACATTGCACTAGATCCCAACTCGCAAG
GCGATATTTACCTGAAGTTCGACCGCGTCCAGGGTGGCGAGAACGCCATC
AAGGGCCTGAACGGGCGTTTCTTTGGTGGTCGACAGATCACCGCCCAGCC
CGTCGTCGACGCTGTCTACAGCAGTCTGTTCTCCCGAACCAAAGCGATCT
AA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
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| GO:0006397 | mRNA processing |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003723 | RNA binding |
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR035979 |
| DBxref | InterPro:IPR029123 |
| DBxref | InterPro:IPR006509 |
| DBxref | InterPro:IPR012677 |
| DBxref | InterPro:IPR000504 |
| DBxref | PFAM:PF00076 |
| DBxref | PFAM:PF15519 |
| Product | CC1-like protein |
| Product | splicing factor |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KZ851922.1 | supercontig | KZ851922.1:200999..203451 + |
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