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M747DRAFT_372356-T1, M747DRAFT_372356-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_372356-T1
Unique NameM747DRAFT_372356-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851927.1:182981..184767-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_372356-T1 ID=M747DRAFT_372356-T1|Name=M747DRAFT_372356-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1787bp|location=Sequence derived from alignment at KZ851927.1:182981..184767- (Aspergillus niger ATCC 13496)
CAGCGCGAAAAATTAGACGTGATCCGCAGCAATATCGGCCACGGTCTTGC
TCTACGATCAGCGCTATCAATCGTTGCGCTCCTCCTGCAGTTTCTCTTCC
CTCCGCTGCCAACAAACAGCTCTCTAGACCACCCAAGCCAATATAACGAT
CCTAAATTCAACGCTAACACCAAGGGTGTTAGCTTCTTTTATCTTTTTGA
CTGGCTCTCCCAATCCTTATACCTTTATTGGTTTGTCGTAGCTTACTCCC
GCTTCATCACCCTCTGGGCCGGCCATGTCGTCGAGGGGACCTTGATCTGC
GGACAAACGGAGTGGGCGACTACGCAGCGCCAAAAGTACAGGCGACAACA
CTTTACTGGCAGCCAGAAGATCTTATGGACGTACCGAAACACTCAGCCAA
GTCTTACAAAATGTCCGACAAGATTAGCTTATTACCTCTGGAACTCATCC
TTCACATACTCTCCTACCTTCCCTTCGAGTCCTTGCTTGCCTTCGGCGAA
ACATCTCGCACCAACTATGAGTCCCATACCCTCTGTCTTGAGTGTCTACG
ATTAGGAGTTTTTGAGAAGCGCATCCACTCTGTGATTTCCTTACTCCAGG
CTGGCTGGACCACCCCGGATCAAATGGCACAGATTTCCAGTCACAATAAA
CAAGCGAACGACTACACAATATCCATCATCCAACCTGCTATGAGCCGGCT
TGCAAGCGACCTGGACAGCAAGCCTCTGCTAAAAATCAAAAGCTTGAAAA
GACGGTGCCCAGCACTACTCGAAAAATCCCGGACATTGGAGCAGATGACT
CGGGAGCAGAACAGGGTCTTTGCCCAAGTGGTGAATCGGTATGGTCGAGG
CCTTAGGAAACTGGAGTTCATGGCGTATGATCTTGACAGCGAGGGTGCCA
TGGCTCTAGCTTCTAAATGCCAGAATATATTGCATCATCTAGCATTGCGC
TTCGAGCATCCACATATTCGGGATGGCCCCATCAGACCCAGCACTTGGAT
GAATCCTGCCCCAGGAAGTACGGCATGGAACATGTTCCTCGGTATAGGAC
GGTACCCACAATTTGGCCTTTGCGGGCTACAGACTTTGATCCTGGAGCGG
GCGGGCATCACTCCGTGGCAGTTGACCATGCTTGTGAAGAAAAACCCCAA
GCTGACTGTTCTCAAACTGAGAACATGTCGCGGTGTGCAGCCCGAGTTTC
TAAACTGGCTAGGTGGAGTGTACTACGAGCCAGAAGAGCTAGGGAGCGAT
GAGGACAGTCTAGCTCCTGGTCGGAATCTGAAAGTGCTGTGGTTGGAAAA
TTGCCACCAGATACTTGCCCATCCCATCGAAAACTATGAGCACCTGCCCG
ACGAAATCTGCGACTTTGGTCTTGGATGGGTTAGAGGTCTGACTAGCTTG
CGTGTAAGTGGAATCTTGTCCCGTGATACCTGCATTCAACCAGCTGACAG
AGTTATCTTGACAGTCTCTATCTTTCAGCGAGAGCGCGAATATCCCGCCC
GAATACATTGACAGAGCTAATAGTGTGCTTTGGAAGATACCAGAAGTCAT
CTTGCCTTATTCGGGTCATGGGGACAAAGCCCCCATCGAAGTTGATCCTG
GATTGTTGTAGTCCACACCGGTTGGCTTATTTTTCTTTTTTTTCTTGGAG
GGTTGGAGGCATCTTGGTGTTGCTTCTTGCAGGTGACTGGAGAGGGATTC
TCGTTTACTGTGTTTTTGAAGATAGACCATTATGTGCAAACACCTGCATG
TCTGTGCTGATGCTACAAAATAATGTAAATCAAATAC
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Coding sequence (CDS) from alignment at KZ851927.1:182981..184767-

>M747DRAFT_372356-T1 ID=M747DRAFT_372356-T1|Name=M747DRAFT_372356-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2352bp|location=Sequence derived from alignment at KZ851927.1:182981..184767- (Aspergillus niger ATCC 13496)
TCTCTATCTTTCAGCGAGAGCGCGAATATCCCGCCCGAATACATTGACAG
AGCTAATAGTGTGCTTTGGAAGATACCAGAAGTCATCTTGCCTTATTCGG
GTCATGGGGACAAAGCCCCCATCGAAGTTGATCCTGGATTGTTGTAGATG
GACGTACCGAAACACTCAGCCAAGTCTTACAAAATGTCCGACAAGATTAG
CTTATTACCTCTGGAACTCATCCTTCACATACTCTCCTACCTTCCCTTCG
AGTCCTTGCTTGCCTTCGGCGAAACATCTCGCACCAACTATGAGTCCCAT
ACCCTCTGTCTTGAGTGTCTACGATTAGGAGTTTTTGAGAAGCGCATCCA
CTCTGTGATTTCCTTACTCCAGGCTGGCTGGACCACCCCGGATCAAATGG
CACAGATTTCCAGTCACAATAAACAAGCGAACGACTACACAATATCCATC
ATCCAACCTGCTATGAGCCGGCTTGCAAGCGACCTGGACAGCAAGCCTCT
GCTAAAAATCAAAAGCTTGAAAAGACGGTGCCCAGCACTACTCGAAAAAT
CCCGGACATTGGAGCAGATGACTCGGGAGCAGAACAGGGTCTTTGCCCAA
GTGGTGAATCGGTATGGTCGAGGCCTTAGGAAACTGGAGTTCATGGCGTA
TGATCTTGACAGCGAGGGTGCCATGGCTCTAGCTTCTAAATGCCAGAATA
TATTGCATCATCTAGCATTGCGCTTCGAGCATCCACATATTCGGGATGGC
CCCATCAGACCCAGCACTTGGATGAATCCTGCCCCAGGAAGTACGGCATG
GAACATGTTCCTCGGTATAGGACGGTACCCACAATTTGGCCTTTGCGGGC
TACAGACTTTGATCCTGGAGCGGGCGGGCATCACTCCGTGGCAGTTGACC
ATGCTTGTGAAGAAAAACCCCAAGCTGACTGTTCTCAAACTGAGAACATG
TCGCGGTGTGCAGCCCGAGTTTCTAAACTGGCTAGGTGGAGTGTACTACG
AGCCAGAAGAGCTAGGGAGCGATGAGGACAGTCTAGCTCCTGGTCGGAAT
CTGAAAGTGCTGTGGTTGGAAAATTGCCACCAGATACTTGCCCATCCCAT
CGAAAACTATGAGCACCTGCCCGACGAAATCTGCGACTTTGGTCTTGGAT
GGGTTAGAGGTCTGACTAGCTTGCGTTCTCTATCTTTCAGCGAGAGCGCG
AATATCCCGCCCGAATACATTGACAGAGCTAATAGTGTGCTTTGGAAGAT
ACCAGAAGTCATCTTGCCTTATTCGGGTCATGGGGACAAAGCCCCCATCG
AAGTTGATCCTGGATTGTTGTAGATGGACGTACCGAAACACTCAGCCAAG
TCTTACAAAATGTCCGACAAGATTAGCTTATTACCTCTGGAACTCATCCT
TCACATACTCTCCTACCTTCCCTTCGAGTCCTTGCTTGCCTTCGGCGAAA
CATCTCGCACCAACTATGAGTCCCATACCCTCTGTCTTGAGTGTCTACGA
TTAGGAGTTTTTGAGAAGCGCATCCACTCTGTGATTTCCTTACTCCAGGC
TGGCTGGACCACCCCGGATCAAATGGCACAGATTTCCAGTCACAATAAAC
AAGCGAACGACTACACAATATCCATCATCCAACCTGCTATGAGCCGGCTT
GCAAGCGACCTGGACAGCAAGCCTCTGCTAAAAATCAAAAGCTTGAAAAG
ACGGTGCCCAGCACTACTCGAAAAATCCCGGACATTGGAGCAGATGACTC
GGGAGCAGAACAGGGTCTTTGCCCAAGTGGTGAATCGGTATGGTCGAGGC
CTTAGGAAACTGGAGTTCATGGCGTATGATCTTGACAGCGAGGGTGCCAT
GGCTCTAGCTTCTAAATGCCAGAATATATTGCATCATCTAGCATTGCGCT
TCGAGCATCCACATATTCGGGATGGCCCCATCAGACCCAGCACTTGGATG
AATCCTGCCCCAGGAAGTACGGCATGGAACATGTTCCTCGGTATAGGACG
GTACCCACAATTTGGCCTTTGCGGGCTACAGACTTTGATCCTGGAGCGGG
CGGGCATCACTCCGTGGCAGTTGACCATGCTTGTGAAGAAAAACCCCAAG
CTGACTGTTCTCAAACTGAGAACATGTCGCGGTGTGCAGCCCGAGTTTCT
AAACTGGCTAGGTGGAGTGTACTACGAGCCAGAAGAGCTAGGGAGCGATG
AGGACAGTCTAGCTCCTGGTCGGAATCTGAAAGTGCTGTGGTTGGAAAAT
TGCCACCAGATACTTGCCCATCCCATCGAAAACTATGAGCACCTGCCCGA
CGAAATCTGCGACTTTGGTCTTGGATGGGTTAGAGGTCTGACTAGCTTGC
GT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_372356M747DRAFT_372356Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_372356-T1M747DRAFT_372356-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_372356-T1.cdsM747DRAFT_372356-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_372356-T1.utr3p1M747DRAFT_372356-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_372356-T1.exon2M747DRAFT_372356-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_372356-T1.exon1M747DRAFT_372356-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_372356-T1.utr5p1M747DRAFT_372356-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036047
DBxrefInterPro:IPR032675
DBxrefInterPro:IPR001810
DBxrefPFAM:PF00646
ProductF-box domain protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851927.1supercontigKZ851927.1:182981..184767 -
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