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M747DRAFT_297852-T1, M747DRAFT_297852-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_297852-T1
Unique NameM747DRAFT_297852-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851929.1:208460..210851-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_297852-T1 ID=M747DRAFT_297852-T1|Name=M747DRAFT_297852-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=2392bp|location=Sequence derived from alignment at KZ851929.1:208460..210851- (Aspergillus niger ATCC 13496)
GCAACTACTACAATTCAACCTCACTGCCACCGTTATTATGGAAGGTGCCG
ATATTGTTGAGTCGCCGCGCAAGCGGCTCAAGACCGATAACAACTCCGTT
ACCGATGATGCTGCGCTTCCTTCCTCCAACGAGGCAATTGCGCAATCGGA
CGCCGCTAAACTCTCCGCGGAGGAGGCGAGAGAACTCGAGGTCGGAATCA
CCGAGTTTGTCAGCGGCGATAATGAAGGGTTCTACGGTATCCTAAAGAAA
AGGTATAACTACTCTCTGAATACTGTAATCATGCAGGCGCTTACCGACCT
CTTCTACTAGATATACCGACTTCCTTGTCAACGAGATCGTACCGTCCGGC
GAAGTCCTGCATCTTCACAACATCCCCACCCCGGAAGCAGAACAGGAGAA
GGCTAAGCCCGCGGATACTCCCACGCCCAAACCCGCAGAAAATGATCAGC
AGGAAAAGCCAGAAGGCTCCGCAGAGAAGGATGCTGCGCCAAGTGCAGAG
AGCACGCCGGACTTCCAGATCCCAGAGGAAGACATGACGCTCCTTGAATC
CCTGTTTGGCGAAGAATCTACCAAGAAGATTGTATCGCTGAACAAACGTG
CCCTTCTCAATCCCAAATCGAAACCGAGCGACCTACCTAAGATTCCCACT
CTTCTTGTCGATGACCGCGACCTGCGCATCAAGATGCACCAGGCCATCCG
TCGCATCTTCAAATCGCAACTCGAGTCTCAAACCGACAGCGAAGGGATGA
TGGTTATTTCTGCTGCGCCAAACCGGAACAACCGTAGTGCGCAGGGCGGG
CGTAACAATGCGCGCCCCCGTGTGCCGGTCAACTGGGATGAGCTGGGTGG
TCCCTATCTGCACTTCACTCTGTACAAGGAGAATAAGGATACTATGGAAG
TTCTCTCGTTCATCTCGCGGCAGTTGAAGATTAACACGAAGAACTTCCAA
TTCGCTGGAACCAAGGACCGCCGCGGTGTTACTGTTCAGAGGGCCTGTGC
GCACCGTTTACATGCTGAGCGCCTCACAAAGATCAACCCTACGCTTCGCA
ACGCTGCTCTCGGCGATTTCGAGTATTGCAAACATGGCCTTGACCTGGGA
GATCTGAATGGCAACGAATTCGTTATCAGTCTCCGTGAGTGCGATATTCC
AGGTGTCGACTTCAGCAACCGTGAAACTGCTGTTGCAAAGGCAAAGGAGG
TCGTGGGCACAGCACTACGGAATCTCCGCGAGCGCGGTTACTTCAACTAC
TTCGGTCTGCAACGTTTTGGAACCTTTGCTACCCGTACAGACACGGTCGG
TGTCAAGATGCTCCAGGGCGACTTCAAGGGCGCCTGCGATGCCATCCTCC
AGTACAGCCCTCATGCTCTAGCTGCTGCTCAGGAGGGCGAGAACTCGACG
GCCTTGGTCAGCTCCGATGACAAGGCCCGCGCAGAAGCTATCCACATTTT
TGAAACGACCGGAAACGCCAACAAGGCTCTTGAGAAGCTGCCTCGAAAAT
TCGCGGCAGAATCCACCGTCATGCGTCAACTCAGCCGTGCCCAGAACGAC
TACCTTGGTGCGCTCCAAGCTATCCCTCGTAACCTGCGGTTGATGTATGT
CCACGCGTACCAGTCCTTGGTCTGGAACTTTGCCGCCGGTGAGCGCTGGC
GCCTGTACGGCGACAAGGTCGTGGAGGGTGATCTCGTGCTGGTGCACGAG
CACAGCGACAAGGATGACACGGCAGCTGCCGCCGCCGCGGGCGAGGTTGA
CGCCGATGGCGAAGTCATCATCACCCCGCAGGCGGGAGACAGCGCTTACG
TCTCTGAAGGCATAACCCGTGCGCGCGCCTTGACTGCCGAGGAGGCAGCT
AGCGGCAAGTACAGCATCTTCGATGTCGTTCTGACCCAGCCCGGCTACGA
TGTCCTTTACCCGCCCAACAAGATGACGGACTTCTACAAACAATTCATGG
GCAGTGCTCAGGGTGGCGGTCTCGACCCCTTCGACATGCGTCGCAAGTGG
AGGGAGGTTAGTCTCACTGGTAGCTATCGCAAGCTGCTCAACCGCCCGGG
ACCCGACTTCTCCTTCGACGTGCATGTGTATACTCAGGACGATGAGCAGT
TTGTGCAGACTGACTTGGAAAAGCTCCAAGGCAAGAAGGCTGAGACTGAG
ACTTCCGGTGAAGCGACGCCTTCCTCCAACGCTCAGGAGAAGCTCGCCAT
TGTGCTCAAGTTCCAGCTCGGTTCGAGTCAGTATGCCACCATGGCTCTGA
GGGAGTTGTCCAAGGGTAAGGTCAAGGCCTACCAGCCCGATTTCGGCAAG
GGTCGGTAGACGATGGGTGTATATATAGTACAAGCTACATTTTTGTATAT
ACTGGGTATAGATTGACTTGCAACATGATTGAACGCTACGTG
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Coding sequence (CDS) from alignment at KZ851929.1:208460..210851-

>M747DRAFT_297852-T1 ID=M747DRAFT_297852-T1|Name=M747DRAFT_297852-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=4428bp|location=Sequence derived from alignment at KZ851929.1:208460..210851- (Aspergillus niger ATCC 13496)
ATATACCGACTTCCTTGTCAACGAGATCGTACCGTCCGGCGAAGTCCTGC
ATCTTCACAACATCCCCACCCCGGAAGCAGAACAGGAGAAGGCTAAGCCC
GCGGATACTCCCACGCCCAAACCCGCAGAAAATGATCAGCAGGAAAAGCC
AGAAGGCTCCGCAGAGAAGGATGCTGCGCCAAGTGCAGAGAGCACGCCGG
ACTTCCAGATCCCAGAGGAAGACATGACGCTCCTTGAATCCCTGTTTGGC
GAAGAATCTACCAAGAAGATTGTATCGCTGAACAAACGTGCCCTTCTCAA
TCCCAAATCGAAACCGAGCGACCTACCTAAGATTCCCACTCTTCTTGTCG
ATGACCGCGACCTGCGCATCAAGATGCACCAGGCCATCCGTCGCATCTTC
AAATCGCAACTCGAGTCTCAAACCGACAGCGAAGGGATGATGGTTATTTC
TGCTGCGCCAAACCGGAACAACCGTAGTGCGCAGGGCGGGCGTAACAATG
CGCGCCCCCGTGTGCCGGTCAACTGGGATGAGCTGGGTGGTCCCTATCTG
CACTTCACTCTGTACAAGGAGAATAAGGATACTATGGAAGTTCTCTCGTT
CATCTCGCGGCAGTTGAAGATTAACACGAAGAACTTCCAATTCGCTGGAA
CCAAGGACCGCCGCGGTGTTACTGTTCAGAGGGCCTGTGCGCACCGTTTA
CATGCTGAGCGCCTCACAAAGATCAACCCTACGCTTCGCAACGCTGCTCT
CGGCGATTTCGAGTATTGCAAACATGGCCTTGACCTGGGAGATCTGAATG
GCAACGAATTCGTTATCAGTCTCCGTGAGTGCGATATTCCAGGTGTCGAC
TTCAGCAACCGTGAAACTGCTGTTGCAAAGGCAAAGGAGGTCGTGGGCAC
AGCACTACGGAATCTCCGCGAGCGCGGTTACTTCAACTACTTCGGTCTGC
AACGTTTTGGAACCTTTGCTACCCGTACAGACACGGTCGGTGTCAAGATG
CTCCAGGGCGACTTCAAGGGCGCCTGCGATGCCATCCTCCAGTACAGCCC
TCATGCTCTAGCTGCTGCTCAGGAGGGCGAGAACTCGACGGCCTTGGTCA
GCTCCGATGACAAGGCCCGCGCAGAAGCTATCCACATTTTTGAAACGACC
GGAAACGCCAACAAGGCTCTTGAGAAGCTGCCTCGAAAATTCGCGGCAGA
ATCCACCGTCATGCGTCAACTCAGCCGTGCCCAGAACGACTACCTTGGTG
CGCTCCAAGCTATCCCTCGTAACCTGCGGTTGATGTATGTCCACGCGTAC
CAGTCCTTGGTCTGGAACTTTGCCGCCGGTGAGCGCTGGCGCCTGTACGG
CGACAAGGTCGTGGAGGGTGATCTCGTGCTGGTGCACGAGCACAGCGACA
AGGATGACACGGCAGCTGCCGCCGCCGCGGGCGAGGTTGACGCCGATGGC
GAAGTCATCATCACCCCGCAGGCGGGAGACAGCGCTTACGTCTCTGAAGG
CATAACCCGTGCGCGCGCCTTGACTGCCGAGGAGGCAGCTAGCGGCAAGT
ACAGCATCTTCGATGTCGTTCTGACCCAGCCCGGCTACGATGTCCTTTAC
CCGCCCAACAAGATGACGGACTTCTACAAACAATTCATGGGCAGTGCTCA
GGGTGGCGGTCTCGACCCCTTCGACATGCGTCGCAAGTGGAGGGAGGTTA
GTCTCACTGGTAGCTATCGCAAGCTGCTCAACCGCCCGGGACCCGACTTC
TCCTTCGACGTGCATGTGTATACTCAGGACGATGAGCAGTTTGTGCAGAC
TGACTTGGAAAAGCTCCAAGGCAAGAAGGCTGAGACTGAGACTTCCGGTG
AAGCGACGCCTTCCTCCAACGCTCAGGAGAAGCTCGCCATTGTGCTCAAG
TTCCAGCTCGGTTCGAGTCAGTATGCCACCATGGCTCTGAGGGAGTTGTC
CAAGGGTAAGGTCAAGGCCTACCAGCCCGATTTCGGCAAGGGTCGGTAGA
TGGAAGGTGCCGATATTGTTGAGTCGCCGCGCAAGCGGCTCAAGACCGAT
AACAACTCCGTTACCGATGATGCTGCGCTTCCTTCCTCCAACGAGGCAAT
TGCGCAATCGGACGCCGCTAAACTCTCCGCGGAGGAGGCGAGAGAACTCG
AGGTCGGAATCACCGAGTTTGTCAGCGGCGATAATGAAGGGTTCTACGGT
ATCCTAAAGAAAAGATATACCGACTTCCTTGTCAACGAGATCGTACCGTC
CGGCGAAGTCCTGCATCTTCACAACATCCCCACCCCGGAAGCAGAACAGG
AGAAGGCTAAGCCCGCGGATACTCCCACGCCCAAACCCGCAGAAAATGAT
CAGCAGGAAAAGCCAGAAGGCTCCGCAGAGAAGGATGCTGCGCCAAGTGC
AGAGAGCACGCCGGACTTCCAGATCCCAGAGGAAGACATGACGCTCCTTG
AATCCCTGTTTGGCGAAGAATCTACCAAGAAGATTGTATCGCTGAACAAA
CGTGCCCTTCTCAATCCCAAATCGAAACCGAGCGACCTACCTAAGATTCC
CACTCTTCTTGTCGATGACCGCGACCTGCGCATCAAGATGCACCAGGCCA
TCCGTCGCATCTTCAAATCGCAACTCGAGTCTCAAACCGACAGCGAAGGG
ATGATGGTTATTTCTGCTGCGCCAAACCGGAACAACCGTAGTGCGCAGGG
CGGGCGTAACAATGCGCGCCCCCGTGTGCCGGTCAACTGGGATGAGCTGG
GTGGTCCCTATCTGCACTTCACTCTGTACAAGGAGAATAAGGATACTATG
GAAGTTCTCTCGTTCATCTCGCGGCAGTTGAAGATTAACACGAAGAACTT
CCAATTCGCTGGAACCAAGGACCGCCGCGGTGTTACTGTTCAGAGGGCCT
GTGCGCACCGTTTACATGCTGAGCGCCTCACAAAGATCAACCCTACGCTT
CGCAACGCTGCTCTCGGCGATTTCGAGTATTGCAAACATGGCCTTGACCT
GGGAGATCTGAATGGCAACGAATTCGTTATCAGTCTCCGTGAGTGCGATA
TTCCAGGTGTCGACTTCAGCAACCGTGAAACTGCTGTTGCAAAGGCAAAG
GAGGTCGTGGGCACAGCACTACGGAATCTCCGCGAGCGCGGTTACTTCAA
CTACTTCGGTCTGCAACGTTTTGGAACCTTTGCTACCCGTACAGACACGG
TCGGTGTCAAGATGCTCCAGGGCGACTTCAAGGGCGCCTGCGATGCCATC
CTCCAGTACAGCCCTCATGCTCTAGCTGCTGCTCAGGAGGGCGAGAACTC
GACGGCCTTGGTCAGCTCCGATGACAAGGCCCGCGCAGAAGCTATCCACA
TTTTTGAAACGACCGGAAACGCCAACAAGGCTCTTGAGAAGCTGCCTCGA
AAATTCGCGGCAGAATCCACCGTCATGCGTCAACTCAGCCGTGCCCAGAA
CGACTACCTTGGTGCGCTCCAAGCTATCCCTCGTAACCTGCGGTTGATGT
ATGTCCACGCGTACCAGTCCTTGGTCTGGAACTTTGCCGCCGGTGAGCGC
TGGCGCCTGTACGGCGACAAGGTCGTGGAGGGTGATCTCGTGCTGGTGCA
CGAGCACAGCGACAAGGATGACACGGCAGCTGCCGCCGCCGCGGGCGAGG
TTGACGCCGATGGCGAAGTCATCATCACCCCGCAGGCGGGAGACAGCGCT
TACGTCTCTGAAGGCATAACCCGTGCGCGCGCCTTGACTGCCGAGGAGGC
AGCTAGCGGCAAGTACAGCATCTTCGATGTCGTTCTGACCCAGCCCGGCT
ACGATGTCCTTTACCCGCCCAACAAGATGACGGACTTCTACAAACAATTC
ATGGGCAGTGCTCAGGGTGGCGGTCTCGACCCCTTCGACATGCGTCGCAA
GTGGAGGGAGGTTAGTCTCACTGGTAGCTATCGCAAGCTGCTCAACCGCC
CGGGACCCGACTTCTCCTTCGACGTGCATGTGTATACTCAGGACGATGAG
CAGTTTGTGCAGACTGACTTGGAAAAGCTCCAAGGCAAGAAGGCTGAGAC
TGAGACTTCCGGTGAAGCGACGCCTTCCTCCAACGCTCAGGAGAAGCTCG
CCATTGTGCTCAAGTTCCAGCTCGGTTCGAGTCAGTATGCCACCATGGCT
CTGAGGGAGTTGTCCAAGGGTAAGGTCAAGGCCTACCAGCCCGATTTCGG
CAAGGGTCGGTAGATGGAAGGTGCCGATATTGTTGAGTCGCCGCGCAAGC
GGCTCAAGACCGATAACAACTCCGTTACCGATGATGCTGCGCTTCCTTCC
TCCAACGAGGCAATTGCGCAATCGGACGCCGCTAAACTCTCCGCGGAGGA
GGCGAGAGAACTCGAGGTCGGAATCACCGAGTTTGTCAGCGGCGATAATG
AAGGGTTCTACGGTATCCTAAAGAAAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0009982pseudouridine synthase activity
Vocabulary: Biological Process
TermDefinition
GO:0009451RNA modification
GO:0001522pseudouridine synthesis
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_297852M747DRAFT_297852Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297852-T1M747DRAFT_297852-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297852-T1.cdsM747DRAFT_297852-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297852-T1.utr3p1M747DRAFT_297852-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297852-T1.exon2M747DRAFT_297852-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_297852-T1.exon1M747DRAFT_297852-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_297852-T1.utr5p1M747DRAFT_297852-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09261EY9
DBxrefInterPro:IPR020103
DBxrefInterPro:IPR011760
DBxrefInterPro:IPR042214
DBxrefInterPro:IPR001656
DBxrefPFAM:PF01142
ProducttRNA pseudouridine synthase D
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851929.1supercontigKZ851929.1:208460..210851 -
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