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M747DRAFT_298157-T1, M747DRAFT_298157-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_298157-T1
Unique NameM747DRAFT_298157-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851932.1:173908..175151-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_298157-T1 ID=M747DRAFT_298157-T1|Name=M747DRAFT_298157-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=1244bp|location=Sequence derived from alignment at KZ851932.1:173908..175151- (Aspergillus niger ATCC 13496)
CAGCCTCTCCCAGTCTCACCCTCGCCATCATGAAGCTCGTTTATCTCGGG
GTAAGGAATGACGGATGTTATCTGTTCATCGTGTCGGCTGTCTGACCCCG
TTCATCTGGACAGATTCTCCAAAATGCTCAAGCTCCCGCCGTGGAGCTCT
GCGCCGAGCGCGATCTCAGCAGCTATTCGCGCTTCACCAAGGGCAGCGTC
AGCGAATTCATGACGATGTTCAGTAAGACCGTGGCCGAACGGACGAAACA
AGGACAAAGACAGGACATTCAAGAGCAAGGCAAGTTGGCGTCCCTCGGGG
TCGTCTTTTCACCCCCTCTGCGGCAGCCCCTGACCGCCGGTCGCCTACAG
ATTTCACATTTCACGTCTACGCGCGAACCCAAGGCATCGCCGGAGTGATT
ATTAGCGATAATGAGTACCCGTCCCTGGCTGCTCACCAGATCCTCTCGAA
AATGCTGGATGAGTTCCTCTCCCTGAACCCGAACGCCGCCTCCTCCCGTG
ACCCGGTGCCCTTCCCCTCCCTCAAGACCTACATTCAGGCGTACCAGGAC
CCACACCAGGTGGATAGCATCCTCAAGATTCAGAAGGAGCTGGACGAGAC
CAAGATCGTTTTGCATAAGACTATCGAGAGCGTATGTTCTGCGCGCATTA
CATGTGGGCAGAATGGTGCTAACTCCCCAACCAGGTCCTCGAGCGCGGAG
AGAAGATTGACGATCTCGTGTCCAAGTCGGAGGGGCTCAGTGCCCAGTCG
AAGATGTTCTACACCTCTGCGAAGAAGCAGAATTCGTGCTGTGTGATCAT
GTGAGCAGCGCGCCGATACCTATGCCGGTAACACCCACGTCGAGAATCCT
CGACACGACCCTCGGAATAGAGGAATTGGTGCGGACATGAAGATCAATCT
TTTCTGTGAAATATTTGGAAGCGTTCTGTTGCTACAGGCATTCGTTTATG
GTTTTTTTGACCAGGCTGGATTTGCAGGCACATGCGGGACAGGTTTGATT
TACGGTAGACGAAGAAATAAGCCCGAGAGCAATGAAGTGGCTTTATGACT
TGAGATGATATGGCAGGGCATTAAGAATGAGATATAAGGGGGAAGAACGT
AGACCCGAGACTATGTGAATACACCGTTTGGCGTACTGTGGCCTCGTCCC
AGCAGTGGATCCGTAGAGGGGCGCATCTGCGATGCTTATCTATGCTCGGG
ATCCGGCACGTTGATTGGCCCAACCAGGCAGTGCAATGCCTAAG
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Coding sequence (CDS) from alignment at KZ851932.1:173908..175151-

>M747DRAFT_298157-T1 ID=M747DRAFT_298157-T1|Name=M747DRAFT_298157-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=2352bp|location=Sequence derived from alignment at KZ851932.1:173908..175151- (Aspergillus niger ATCC 13496)
GTCCTCGAGCGCGGAGAGAAGATTGACGATCTCGTGTCCAAGTCGGAGGG
GCTCAGTGCCCAGTCGAAGATGTTCTACACCTCTGCGAAGAAGCAGAATT
CGTGCTGTGTGATCATGTGAATTTCACATTTCACGTCTACGCGCGAACCC
AAGGCATCGCCGGAGTGATTATTAGCGATAATGAGTACCCGTCCCTGGCT
GCTCACCAGATCCTCTCGAAAATGCTGGATGAGTTCCTCTCCCTGAACCC
GAACGCCGCCTCCTCCCGTGACCCGGTGCCCTTCCCCTCCCTCAAGACCT
ACATTCAGGCGTACCAGGACCCACACCAGGTGGATAGCATCCTCAAGATT
CAGAAGGAGCTGGACGAGACCAAGATCGTTTTGCATAAGACTATCGAGAG
CATTCTCCAAAATGCTCAAGCTCCCGCCGTGGAGCTCTGCGCCGAGCGCG
ATCTCAGCAGCTATTCGCGCTTCACCAAGGGCAGCGTCAGCGAATTCATG
ACGATGTTCAGTAAGACCGTGGCCGAACGGACGAAACAAGGACAAAGACA
GGACATTCAAGAGCAAGATGAAGCTCGTTTATCTCGGGGTCCTCGAGCGC
GGAGAGAAGATTGACGATCTCGTGTCCAAGTCGGAGGGGCTCAGTGCCCA
GTCGAAGATGTTCTACACCTCTGCGAAGAAGCAGAATTCGTGCTGTGTGA
TCATGTGAATTTCACATTTCACGTCTACGCGCGAACCCAAGGCATCGCCG
GAGTGATTATTAGCGATAATGAGTACCCGTCCCTGGCTGCTCACCAGATC
CTCTCGAAAATGCTGGATGAGTTCCTCTCCCTGAACCCGAACGCCGCCTC
CTCCCGTGACCCGGTGCCCTTCCCCTCCCTCAAGACCTACATTCAGGCGT
ACCAGGACCCACACCAGGTGGATAGCATCCTCAAGATTCAGAAGGAGCTG
GACGAGACCAAGATCGTTTTGCATAAGACTATCGAGAGCATTCTCCAAAA
TGCTCAAGCTCCCGCCGTGGAGCTCTGCGCCGAGCGCGATCTCAGCAGCT
ATTCGCGCTTCACCAAGGGCAGCGTCAGCGAATTCATGACGATGTTCAGT
AAGACCGTGGCCGAACGGACGAAACAAGGACAAAGACAGGACATTCAAGA
GCAAGATGAAGCTCGTTTATCTCGGGGTCCTCGAGCGCGGAGAGAAGATT
GACGATCTCGTGTCCAAGTCGGAGGGGCTCAGTGCCCAGTCGAAGATGTT
CTACACCTCTGCGAAGAAGCAGAATTCGTGCTGTGTGATCATGTGAATTT
CACATTTCACGTCTACGCGCGAACCCAAGGCATCGCCGGAGTGATTATTA
GCGATAATGAGTACCCGTCCCTGGCTGCTCACCAGATCCTCTCGAAAATG
CTGGATGAGTTCCTCTCCCTGAACCCGAACGCCGCCTCCTCCCGTGACCC
GGTGCCCTTCCCCTCCCTCAAGACCTACATTCAGGCGTACCAGGACCCAC
ACCAGGTGGATAGCATCCTCAAGATTCAGAAGGAGCTGGACGAGACCAAG
ATCGTTTTGCATAAGACTATCGAGAGCATTCTCCAAAATGCTCAAGCTCC
CGCCGTGGAGCTCTGCGCCGAGCGCGATCTCAGCAGCTATTCGCGCTTCA
CCAAGGGCAGCGTCAGCGAATTCATGACGATGTTCAGTAAGACCGTGGCC
GAACGGACGAAACAAGGACAAAGACAGGACATTCAAGAGCAAGATGAAGC
TCGTTTATCTCGGGGTCCTCGAGCGCGGAGAGAAGATTGACGATCTCGTG
TCCAAGTCGGAGGGGCTCAGTGCCCAGTCGAAGATGTTCTACACCTCTGC
GAAGAAGCAGAATTCGTGCTGTGTGATCATGTGAATTTCACATTTCACGT
CTACGCGCGAACCCAAGGCATCGCCGGAGTGATTATTAGCGATAATGAGT
ACCCGTCCCTGGCTGCTCACCAGATCCTCTCGAAAATGCTGGATGAGTTC
CTCTCCCTGAACCCGAACGCCGCCTCCTCCCGTGACCCGGTGCCCTTCCC
CTCCCTCAAGACCTACATTCAGGCGTACCAGGACCCACACCAGGTGGATA
GCATCCTCAAGATTCAGAAGGAGCTGGACGAGACCAAGATCGTTTTGCAT
AAGACTATCGAGAGCATTCTCCAAAATGCTCAAGCTCCCGCCGTGGAGCT
CTGCGCCGAGCGCGATCTCAGCAGCTATTCGCGCTTCACCAAGGGCAGCG
TCAGCGAATTCATGACGATGTTCAGTAAGACCGTGGCCGAACGGACGAAA
CAAGGACAAAGACAGGACATTCAAGAGCAAGATGAAGCTCGTTTATCTCG
GG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0016192vesicle-mediated transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_298157M747DRAFT_298157Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298157-T1M747DRAFT_298157-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298157-T1.cdsM747DRAFT_298157-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298157-T1.utr3p1M747DRAFT_298157-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298157-T1.exon4M747DRAFT_298157-T1.exon4Aspergillus niger ATCC 13496exon
M747DRAFT_298157-T1.exon3M747DRAFT_298157-T1.exon3Aspergillus niger ATCC 13496exon
M747DRAFT_298157-T1.exon2M747DRAFT_298157-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_298157-T1.exon1M747DRAFT_298157-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_298157-T1.utr5p1M747DRAFT_298157-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264CP4
DBxrefInterPro:IPR011012
DBxrefInterPro:IPR010908
DBxrefInterPro:IPR001388
DBxrefPFAM:PF00957
DBxrefPFAM:PF13774
Productvesicle transport protein ykt6
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851932.1supercontigKZ851932.1:173908..175151 -
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