You are here

Home

M747DRAFT_105647-T1, M747DRAFT_105647-T1 (mRNA) Aspergillus niger ATCC 13496

Overview
NameM747DRAFT_105647-T1
Unique NameM747DRAFT_105647-T1
TypemRNA
OrganismAspergillus niger ATCC 13496
Sequences
The following sequences are available for this feature:

mRNA from alignment at KZ851934.1:87990..88639-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>M747DRAFT_105647-T1 ID=M747DRAFT_105647-T1|Name=M747DRAFT_105647-T1|organism=Aspergillus niger ATCC 13496|type=mRNA|length=650bp|location=Sequence derived from alignment at KZ851934.1:87990..88639- (Aspergillus niger ATCC 13496)
CGAACATCTTGTCCAACGCTCCGTCTTGTTACCTCCGCAACCCACCGACC
GTCAATTGCCTCCCTGCCTGCCCACCATGTTCAAGCCCTCGCAGCCCATG
TTGGCGCGCTTGCGCCTGACCACCAAACAGGTCCTTGGTGGCTACTACAA
GGGTAACCGGACCGGATCGATGGGTTACTTTGCGAAGAACGGGTCATATG
TGATCGATTGGAAAAAAGTCCGCACTTTCGTTGTGCCTGAGAATTTGGAT
CAGTTTAAGGTGGGATTATACCTTCTATGATGTTCAATTGACTTTTACCT
TGGGATTGAAAGACTAATACGGATATGTATGATATAGTTGACCCCCTTCG
TGACCAAGCGTATGCCTCCCACGAAATCCAAGTACACGAAAGAAGTCGAG
AAGCGCGGAAGGATCGTTACCCTTGAACGGGCTTTCAGCGGAAAGGACTA
TCTCGATATGTGGGCCTCGGACAACGGTCAGGAAGTTCTGGAACAGGAGC
GTCTGGACTCTGAGGCCGCAACGGAACAGTCATCGACTACTCAGCCTGCG
CGTCAATAATCGGCATCGCAGTCGTTGCAGTCCTCCAGAGGGAAAGACAT
TCGGATTTTTCGGACATGATGAGGCATATCATACATACCCCCTTCGTCCA
back to top

Coding sequence (CDS) from alignment at KZ851934.1:87990..88639-

>M747DRAFT_105647-T1 ID=M747DRAFT_105647-T1|Name=M747DRAFT_105647-T1|organism=Aspergillus niger ATCC 13496|type=CDS|length=810bp|location=Sequence derived from alignment at KZ851934.1:87990..88639- (Aspergillus niger ATCC 13496)
TTGACCCCCTTCGTGACCAAGCGTATGCCTCCCACGAAATCCAAGTACAC
GAAAGAAGTCGAGAAGCGCGGAAGGATCGTTACCCTTGAACGGGCTTTCA
GCGGAAAGGACTATCTCGATATGTGGGCCTCGGACAACGGTCAGGAAGTT
CTGGAACAGGAGCGTCTGGACTCTGAGGCCGCAACGGAACAGTCATCGAC
TACTCAGCCTGCGCGTCAATAAATGTTCAAGCCCTCGCAGCCCATGTTGG
CGCGCTTGCGCCTGACCACCAAACAGGTCCTTGGTGGCTACTACAAGGGT
AACCGGACCGGATCGATGGGTTACTTTGCGAAGAACGGGTCATATGTGAT
CGATTGGAAAAAAGTCCGCACTTTCGTTGTGCCTGAGAATTTGGATCAGT
TTAAGTTGACCCCCTTCGTGACCAAGCGTATGCCTCCCACGAAATCCAAG
TACACGAAAGAAGTCGAGAAGCGCGGAAGGATCGTTACCCTTGAACGGGC
TTTCAGCGGAAAGGACTATCTCGATATGTGGGCCTCGGACAACGGTCAGG
AAGTTCTGGAACAGGAGCGTCTGGACTCTGAGGCCGCAACGGAACAGTCA
TCGACTACTCAGCCTGCGCGTCAATAAATGTTCAAGCCCTCGCAGCCCAT
GTTGGCGCGCTTGCGCCTGACCACCAAACAGGTCCTTGGTGGCTACTACA
AGGGTAACCGGACCGGATCGATGGGTTACTTTGCGAAGAACGGGTCATAT
GTGATCGATTGGAAAAAAGTCCGCACTTTCGTTGTGCCTGAGAATTTGGA
TCAGTTTAAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
M747DRAFT_105647M747DRAFT_105647Aspergillus niger ATCC 13496gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_105647-T1M747DRAFT_105647-T1-proteinAspergillus niger ATCC 13496polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_105647-T1.cdsM747DRAFT_105647-T1.cdsAspergillus niger ATCC 13496CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_105647-T1.utr3p1M747DRAFT_105647-T1.utr3p1Aspergillus niger ATCC 13496three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_105647-T1.exon2M747DRAFT_105647-T1.exon2Aspergillus niger ATCC 13496exon
M747DRAFT_105647-T1.exon1M747DRAFT_105647-T1.exon1Aspergillus niger ATCC 13496exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
M747DRAFT_105647-T1.utr5p1M747DRAFT_105647-T1.utr5p1Aspergillus niger ATCC 13496five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR019189
DBxrefPFAM:PF09809
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 13496 whole genome analysis2021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KZ851934.1supercontigKZ851934.1:87990..88639 -
Powered by Drupal